RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 C18orf32Q8TCD1 76 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 PCNX1Q96RV3 2341 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 A0A087X0K7 114 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 FAM181BA6NEQ2 426 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 NPY1RP25929 384 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 FABP6P51161 128 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 OCIAD2Q56VL3 154 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 TRIB1Q96RU8 372 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 ZNF138P52744 262 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 FOXF2Q12947 444 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 TRIP6Q15654 476 aaKnown RBP11.41□□□□□ -0.58
SDC1-202ENST00000381150 ZNF766Q5HY98 468 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 Q8N7P7 452 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 NANOS1Q8WY41 292 aaKnown RBP11.41□□□□□ -0.58
SDC1-202ENST00000381150 TRGV5A0A0B4J1U4 118 aa11.4□□□□□ -0.58
SDC1-202ENST00000381150 IGHV2-70DA0A0C4DH43 119 aa11.4□□□□□ -0.58
SDC1-202ENST00000381150 ZNF718Q3SXZ3 478 aa11.4□□□□□ -0.58
SDC1-202ENST00000381150 OR10J3Q5JRS4 329 aa11.4□□□□□ -0.58
SDC1-202ENST00000381150 C19orf35Q6ZS72 473 aa11.4□□□□□ -0.58
SDC1-202ENST00000381150 LINC00596Q86U02 117 aa11.4□□□□□ -0.58
SDC1-202ENST00000381150 OR8B3Q8NGG8 313 aa11.4□□□□□ -0.58
SDC1-202ENST00000381150 AP1S3Q96PC3 154 aa11.4□□□□□ -0.58
SDC1-202ENST00000381150 TRAV5A0A0B4J249 113 aa11.4□□□□□ -0.58
SDC1-202ENST00000381150 WISP2O76076 250 aa11.4□□□□□ -0.58
SDC1-202ENST00000381150 AARDQ4LEZ3 155 aa11.4□□□□□ -0.58
SDC1-202ENST00000381150 LINC00173Q6ZV60 143 aa11.4□□□□□ -0.58
SDC1-202ENST00000381150 PIP4P1Q86T03 277 aa11.4□□□□□ -0.58
SDC1-202ENST00000381150 S1PR3Q99500 378 aa11.4□□□□□ -0.58
SDC1-202ENST00000381150 MEGF9Q9H1U4 602 aa11.4□□□□□ -0.58
SDC1-202ENST00000381150 CORTO00230 105 aa11.4□□□□□ -0.59
SDC1-202ENST00000381150 ESDP10768 282 aa11.4□□□□□ -0.59
SDC1-202ENST00000381150 NEUROG1Q92886 237 aa11.4□□□□□ -0.59
SDC1-202ENST00000381150 TACC2O95359 2948 aa11.39□□□□□ -0.59
SDC1-202ENST00000381150 KALRNO60229 2985 aa11.39□□□□□ -0.59
SDC1-202ENST00000381150 IGHV1-69-2A0A0G2JMI3 117 aa11.39□□□□□ -0.59
SDC1-202ENST00000381150 OOEPA6NGQ2 149 aa11.39□□□□□ -0.59
SDC1-202ENST00000381150 SPINT2O43291 252 aa11.39□□□□□ -0.59
SDC1-202ENST00000381150 BPIFB3P59826 476 aa11.39□□□□□ -0.59
SDC1-202ENST00000381150 NABP2Q9BQ15 211 aa11.39□□□□□ -0.59
SDC1-202ENST00000381150 TMEM140Q9NV12 185 aa11.39□□□□□ -0.59
SDC1-202ENST00000381150 TCF19Q9Y242 345 aa11.39□□□□□ -0.59
SDC1-202ENST00000381150 TRBV6-6A0A0A6YYG2 114 aa11.39□□□□□ -0.59
SDC1-202ENST00000381150 IGHV2-26A0A0B4J1V2 119 aa11.39□□□□□ -0.59
SDC1-202ENST00000381150 IGLC7A0M8Q6 106 aa11.39□□□□□ -0.59
SDC1-202ENST00000381150 H3BTX0 84 aa11.39□□□□□ -0.59
SDC1-202ENST00000381150 ARG2P78540 354 aa11.39□□□□□ -0.59
SDC1-202ENST00000381150 OR52E5Q8NH55 327 aa11.39□□□□□ -0.59
SDC1-202ENST00000381150 RAB1CQ92928 201 aa11.39□□□□□ -0.59
SDC1-202ENST00000381150 TRGV10A0A0A0MS01 117 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 TRBV9A0A0B4J1U6 114 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 PPIAL4DF5H284 164 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 SAP30O75446 220 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 PPOXP50336 477 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 UBE2L3P68036 154 aaKnown RBP11.38□□□□□ -0.59
SDC1-202ENST00000381150 SRSF6Q13247 344 aaKnown RBP11.38□□□□□ -0.59
SDC1-202ENST00000381150 Q6ZR03 302 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 NUDT10Q8NFP7 164 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 SLC25A40Q8TBP6 338 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 BLNKQ8WV28 456 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 CSMD1Q96PZ7 3565 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 MPDU1O75352 247 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 LYZL6O75951 148 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 SPACA3Q8IXA5 215 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 MRPS16Q9Y3D3 137 aaKnown RBP11.38□□□□□ -0.59
SDC1-202ENST00000381150 MED13LQ71F56 2210 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 GAGE12BA1L429 117 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 GFRA3O60609 400 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 LINC00869P0C866 280 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 TCF24Q7RTU0 167 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 RAB37Q96AX2 223 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 NUDT11Q96G61 164 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 TMEM70Q9BUB7 260 aa11.38□□□□□ -0.59
SDC1-202ENST00000381150 TXNDC17Q9BRA2 123 aa11.37□□□□□ -0.59
SDC1-202ENST00000381150 TPPP3Q9BW30 176 aa11.37□□□□□ -0.59
SDC1-202ENST00000381150 PKIBQ9C010 78 aa11.37□□□□□ -0.59
SDC1-202ENST00000381150 FNDC4Q9H6D8 234 aaPredicted RBP11.37□□□□□ -0.59
SDC1-202ENST00000381150 GGTLC3B5MD39 225 aa11.37□□□□□ -0.59
SDC1-202ENST00000381150 GOSR1O95249 250 aa11.37□□□□□ -0.59
SDC1-202ENST00000381150 GUSBP1Q15486 140 aa11.37□□□□□ -0.59
SDC1-202ENST00000381150 SPATA12Q7Z6I5 190 aa11.37□□□□□ -0.59
SDC1-202ENST00000381150 S100A7AQ86SG5 101 aa11.37□□□□□ -0.59
SDC1-202ENST00000381150 MBNL3Q9NUK0 354 aaKnown RBP11.37□□□□□ -0.59
SDC1-202ENST00000381150 DUSP13Q9UII6 198 aa11.37□□□□□ -0.59
SDC1-202ENST00000381150 PLXNB1O43157 2135 aa11.37□□□□□ -0.59
SDC1-202ENST00000381150 IGHV3OR15-7A0A075B7D8 119 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 TRAV30A0A087WSZ9 112 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 FBLL1A6NHQ2 334 aaKnown RBP11.36□□□□□ -0.59
SDC1-202ENST00000381150 HIGD1CA8MV81 97 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 NKX2-8O15522 239 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 IGHG3P01860 377 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 PYYP10082 97 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 IGHV1-2P23083 117 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 TBC1D28Q2M2D7 210 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 SLC25A34Q6PIV7 304 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 TMEM178AQ8NBL3 297 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 ZBTB34Q8NCN2 500 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 COQ2Q96H96 371 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 CACNA1HO95180 2353 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 NPIPB11E5RHQ5 1161 aa11.36□□□□□ -0.59
SDC1-202ENST00000381150 K7EP13 123 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms