RNA–Protein interactions for RNA: ENST00000380876.4

EIF3CL-201, Transcript of eukaryotic translation initiation factor 3 subunit C like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3CL, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3CL-201ENST00000380876 MAFAQ8NHW3 353 aaPredicted RBP11.07□□□□□ -0.64
EIF3CL-201ENST00000380876 MRPS17Q9Y2R5 130 aaKnown RBP11.07□□□□□ -0.64
EIF3CL-201ENST00000380876 PCSK5Q92824 1860 aa11.06□□□□□ -0.64
EIF3CL-201ENST00000380876 IGHV2OR16-5A0A0B4J2B6 119 aa11.06□□□□□ -0.64
EIF3CL-201ENST00000380876 C9JCJ5 164 aa11.06□□□□□ -0.64
EIF3CL-201ENST00000380876 K7ESF4 209 aa11.06□□□□□ -0.64
EIF3CL-201ENST00000380876 LRRC29Q8WV35 223 aa11.06□□□□□ -0.64
EIF3CL-201ENST00000380876 FAM173AQ9BQD7 235 aa11.06□□□□□ -0.64
EIF3CL-201ENST00000380876 TNRC6BQ9UPQ9 1833 aaKnown RBP11.06□□□□□ -0.64
EIF3CL-201ENST00000380876 TNFSF4P23510 183 aa11.06□□□□□ -0.64
EIF3CL-201ENST00000380876 RAB31Q13636 194 aa11.06□□□□□ -0.64
EIF3CL-201ENST00000380876 MORN2Q502X0 79 aa11.06□□□□□ -0.64
EIF3CL-201ENST00000380876 SPRNQ5BIV9 151 aa11.06□□□□□ -0.64
EIF3CL-201ENST00000380876 TCF24Q7RTU0 167 aa11.06□□□□□ -0.64
EIF3CL-201ENST00000380876 CNEP1R1Q8N9A8 125 aa11.06□□□□□ -0.64
EIF3CL-201ENST00000380876 OR10W1Q8NGF6 305 aa11.06□□□□□ -0.64
EIF3CL-201ENST00000380876 B4GALT7Q9UBV7 327 aa11.06□□□□□ -0.64
EIF3CL-201ENST00000380876 OR4A47Q6IF82 309 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 DUX4L9Q6RFH8 374 aaPredicted RBP11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 OR4F17Q8NGA8 305 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 GVINP1Q7Z2Y8 2422 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 HLA-DQA1P01909 254 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 SP1P08047 785 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 SSBP2P81877 361 aaPredicted RBP11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 FOXE3Q13461 319 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 SAPCD1Q5SSQ6 148 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 C11orf52Q96A22 123 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 PKDREJQ9NTG1 2253 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 TRAV9-2A0A087WT02 112 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 C15orf65H3BRN8 121 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 TOX4O94842 621 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 UBE2G1P62253 170 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 DEFB108BQ8NET1 73 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 NUP35Q8NFH5 326 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 RND1Q92730 232 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 NAA38Q9BRA0 125 aaKnown RBP11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 TXNDC17Q9BRA2 123 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 GAL3ST2Q9H3Q3 398 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 TNFRSF19Q9NS68 423 aa11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 KLF13Q9Y2Y9 288 aaPredicted RBP11.05□□□□□ -0.64
EIF3CL-201ENST00000380876 IGHV2-26A0A0B4J1V2 119 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 MUC21A0A0G2JKD1 596 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 MUC21A0A140T8X8 626 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 IGLC7A0M8Q6 106 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 MT-ND6P03923 174 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 CSN3P07498 182 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 AREGP15514 252 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 PRDX2P32119 198 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 MUC21Q5SSG8 566 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 AMMECR1LQ6DCA0 310 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 BLNKQ8WV28 456 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 SNRNP40Q96DI7 357 aaKnown RBP11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 INTS1Q8N201 2190 aaKnown RBP11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 TRBV9A0A0B4J1U6 114 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 UBE2L3P68036 154 aaKnown RBP11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 TMEM249Q2WGJ8 235 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 ATP1A1-AS1Q5TC04 95 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 OR2Z1Q8NG97 314 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 NANOS1Q8WY41 292 aaKnown RBP11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 ASCL2Q99929 193 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 OSTCQ9NRP0 149 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 PTPRBP23467 1997 aa11.04□□□□□ -0.64
EIF3CL-201ENST00000380876 DMXL1Q9Y485 3027 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 TRAV9-1A0A075B6T8 112 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 OR4C46A6NHA9 309 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 VWC2LB2RUY7 222 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 MEOX1P50221 254 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 MRPL49Q13405 166 aaKnown RBP11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 HIGD1CA8MV81 97 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 IGHV1-2P23083 117 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 RPL19P84098 196 aaKnown RBP11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 SSX8Q7RTT4 187 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 ARL6IP6Q8N6S5 226 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 HES4Q9HCC6 221 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 A0A087X0K7 114 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 IZUMO1RA6ND01 250 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 ZNF891A8MT65 544 aaPredicted RBP11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 ISLRO14498 428 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 APELAP0DMC3 54 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 PRR20EP86478 221 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 PRR20CP86479 221 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 PRR20DP86480 221 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 PRR20BP86481 221 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 PRR20AP86496 221 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 C19orf35Q6ZS72 473 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 NUDT10Q8NFP7 164 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 NUDT11Q96G61 164 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 OR51B2Q9Y5P1 312 aa11.03□□□□□ -0.64
EIF3CL-201ENST00000380876 ADGRG4Q8IZF6 3080 aa11.02□□□□□ -0.64
EIF3CL-201ENST00000380876 SMIM27A0A1W2PRY6 76 aa11.02□□□□□ -0.65
EIF3CL-201ENST00000380876 J3QR06 171 aa11.02□□□□□ -0.65
EIF3CL-201ENST00000380876 IGKV1-16P04430 117 aa11.02□□□□□ -0.65
EIF3CL-201ENST00000380876 RNFT1Q5M7Z0 435 aa11.02□□□□□ -0.65
EIF3CL-201ENST00000380876 C6orf15Q6UXA7 325 aaPredicted RBP11.02□□□□□ -0.65
EIF3CL-201ENST00000380876 TRIB1Q96RU8 372 aa11.02□□□□□ -0.65
EIF3CL-201ENST00000380876 IFI27L2Q9H2X8 130 aa11.02□□□□□ -0.65
EIF3CL-201ENST00000380876 SAA2-SAA4A0A096LPE2 208 aa11.02□□□□□ -0.65
EIF3CL-201ENST00000380876 IGHV2-70DA0A0C4DH43 119 aa11.02□□□□□ -0.65
EIF3CL-201ENST00000380876 C2orf70A6NJV1 201 aa11.02□□□□□ -0.65
EIF3CL-201ENST00000380876 CDKN1BP46527 198 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms