RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 HIGD1CA8MV81 97 aa10.45□□□□□ -0.74
CHD3-203ENST00000380358 PCP4P48539 62 aa10.45□□□□□ -0.74
CHD3-203ENST00000380358 C1orf159Q96HA4 380 aa10.45□□□□□ -0.74
CHD3-203ENST00000380358 FAM206AQ9NX38 181 aa10.45□□□□□ -0.74
CHD3-203ENST00000380358 CLDN16Q9Y5I7 305 aa10.45□□□□□ -0.74
CHD3-203ENST00000380358 DMRT1Q9Y5R6 373 aa10.45□□□□□ -0.74
CHD3-203ENST00000380358 A0A1B0GUT8 65 aa10.44□□□□□ -0.74
CHD3-203ENST00000380358 SMIM6P0DI80 62 aa10.44□□□□□ -0.74
CHD3-203ENST00000380358 PAX1P15863 534 aa10.44□□□□□ -0.74
CHD3-203ENST00000380358 C6orf226Q5I0X4 101 aa10.44□□□□□ -0.74
CHD3-203ENST00000380358 F5H768 121 aa10.44□□□□□ -0.74
CHD3-203ENST00000380358 RAMP1O60894 148 aa10.44□□□□□ -0.74
CHD3-203ENST00000380358 MYOD1P15172 320 aa10.44□□□□□ -0.74
CHD3-203ENST00000380358 ANAPC13Q9BS18 74 aa10.44□□□□□ -0.74
CHD3-203ENST00000380358 IFI27L2Q9H2X8 130 aa10.44□□□□□ -0.74
CHD3-203ENST00000380358 IGHV3-16A0A0C4DH30 117 aa10.44□□□□□ -0.74
CHD3-203ENST00000380358 FCN3O75636 299 aa10.44□□□□□ -0.74
CHD3-203ENST00000380358 NCR2O95944 276 aa10.44□□□□□ -0.74
CHD3-203ENST00000380358 PTGDSP41222 190 aa10.44□□□□□ -0.74
CHD3-203ENST00000380358 ZXDCQ2QGD7 858 aaPredicted RBP10.44□□□□□ -0.74
CHD3-203ENST00000380358 SLC25A39Q9BZJ4 359 aaPredicted RBP10.44□□□□□ -0.74
CHD3-203ENST00000380358 RPL34P49207 117 aaKnown RBP10.44□□□□□ -0.74
CHD3-203ENST00000380358 FOXL1Q12952 345 aa10.44□□□□□ -0.74
CHD3-203ENST00000380358 SLC25A47Q6Q0C1 308 aa10.44□□□□□ -0.74
CHD3-203ENST00000380358 PEF1Q9UBV8 284 aaKnown RBP10.44□□□□□ -0.74
CHD3-203ENST00000380358 TDRD15B5MCY1 1934 aaKnown RBP10.43□□□□□ -0.74
CHD3-203ENST00000380358 CLPSL2Q6UWE3 100 aa10.43□□□□□ -0.74
CHD3-203ENST00000380358 MRPL32Q9BYC8 188 aaKnown RBP10.43□□□□□ -0.74
CHD3-203ENST00000380358 KBTBD11-OT1A0A1B0GTJ5 212 aa10.43□□□□□ -0.74
CHD3-203ENST00000380358 VWC2LB2RUY7 222 aa10.43□□□□□ -0.74
CHD3-203ENST00000380358 PYYP10082 97 aa10.43□□□□□ -0.74
CHD3-203ENST00000380358 OCIAD2Q56VL3 154 aa10.43□□□□□ -0.74
CHD3-203ENST00000380358 RPP21Q9H633 154 aaKnown RBP10.43□□□□□ -0.74
CHD3-203ENST00000380358 F8VVB4 439 aa10.43□□□□□ -0.74
CHD3-203ENST00000380358 F8VWA3 439 aa10.43□□□□□ -0.74
CHD3-203ENST00000380358 CD300LDQ6UXZ3 194 aa10.43□□□□□ -0.74
CHD3-203ENST00000380358 NEUROG1Q92886 237 aa10.43□□□□□ -0.74
CHD3-203ENST00000380358 MS4A6AQ9H2W1 248 aa10.43□□□□□ -0.74
CHD3-203ENST00000380358 DDX60LQ5H9U9 1706 aaKnown RBP10.43□□□□□ -0.74
CHD3-203ENST00000380358 ZNF876PQ49A33 203 aa10.42□□□□□ -0.74
CHD3-203ENST00000380358 DOCK2Q92608 1830 aa10.42□□□□□ -0.74
CHD3-203ENST00000380358 TP53BP1Q12888 1972 aaPredicted RBP10.42□□□□□ -0.74
CHD3-203ENST00000380358 IGHV1-2P23083 117 aa10.42□□□□□ -0.74
CHD3-203ENST00000380358 DLX4Q92988 240 aaPredicted RBP10.42□□□□□ -0.74
CHD3-203ENST00000380358 PGPEP1LA6NFU8 196 aa10.42□□□□□ -0.74
CHD3-203ENST00000380358 THBDP07204 575 aa10.42□□□□□ -0.74
CHD3-203ENST00000380358 SIGLEC15Q6ZMC9 328 aa10.42□□□□□ -0.74
CHD3-203ENST00000380358 ITGB1BP1O14713 200 aa10.42□□□□□ -0.74
CHD3-203ENST00000380358 ORMDL3Q8N138 153 aa10.42□□□□□ -0.74
CHD3-203ENST00000380358 FAM181AQ8N9Y4 354 aa10.42□□□□□ -0.74
CHD3-203ENST00000380358 G6PC2Q9NQR9 355 aa10.42□□□□□ -0.74
CHD3-203ENST00000380358 NGFRP08138 427 aa10.42□□□□□ -0.74
CHD3-203ENST00000380358 Q6ZT83 130 aa10.42□□□□□ -0.74
CHD3-203ENST00000380358 IL17RELQ6ZVW7 336 aa10.42□□□□□ -0.74
CHD3-203ENST00000380358 C9orf106Q8NAJ2 232 aa10.42□□□□□ -0.74
CHD3-203ENST00000380358 OR5P3Q8WZ94 311 aa10.42□□□□□ -0.74
CHD3-203ENST00000380358 CEP290O15078 2479 aa10.42□□□□□ -0.74
CHD3-203ENST00000380358 NBR2O15453 112 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 LY6HO94772 140 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 PAX8Q06710 450 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 TIMM23BQ5SRD1 257 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 RICTORQ6R327 1708 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 CD55P08174 381 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 GAGE2EQ4V326 116 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 VMO1Q7Z5L0 202 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 GAGE2DQ9UEU5 116 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 IGHV2OR16-5A0A0B4J2B6 119 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 HMGCLL1Q8TB92 370 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 RAG2P55895 527 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 C5orf66Q9H5L9 145 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 PLA2G10O15496 165 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 WNT2P09544 360 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 ASPHD2Q6ICH7 369 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 FAM57AQ8TBR7 257 aa10.41□□□□□ -0.74
CHD3-203ENST00000380358 SSBP2P81877 361 aaPredicted RBP10.4□□□□□ -0.74
CHD3-203ENST00000380358 DEFB105AQ8NG35 78 aa10.4□□□□□ -0.74
CHD3-203ENST00000380358 FMC1Q96HJ9 113 aa10.4□□□□□ -0.74
CHD3-203ENST00000380358 TRAV8-3A0A0A6YYJ7 113 aa10.4□□□□□ -0.74
CHD3-203ENST00000380358 IGKV1-8A0A0C4DH67 115 aa10.4□□□□□ -0.74
CHD3-203ENST00000380358 DDTP30046 118 aa10.4□□□□□ -0.74
CHD3-203ENST00000380358 CEP250Q9BV73 2442 aa10.4□□□□□ -0.74
CHD3-203ENST00000380358 TIMM23O14925 209 aa10.4□□□□□ -0.74
CHD3-203ENST00000380358 WFDC6Q9BQY6 131 aa10.4□□□□□ -0.74
CHD3-203ENST00000380358 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.4□□□□□ -0.74
CHD3-203ENST00000380358 HMGA2P52926 109 aa10.4□□□□□ -0.74
CHD3-203ENST00000380358 OR10W1Q8NGF6 305 aa10.4□□□□□ -0.74
CHD3-203ENST00000380358 SDK2Q58EX2 2172 aa10.4□□□□□ -0.74
CHD3-203ENST00000380358 ABCA7Q8IZY2 2146 aa10.4□□□□□ -0.74
CHD3-203ENST00000380358 MBD3L4A6NDZ8 208 aaPredicted RBP10.4□□□□□ -0.75
CHD3-203ENST00000380358 MBD3L3A6NE82 208 aaPredicted RBP10.4□□□□□ -0.75
CHD3-203ENST00000380358 MBD3L5A6NJ08 208 aaPredicted RBP10.4□□□□□ -0.75
CHD3-203ENST00000380358 C12orf77C9JDV5 145 aa10.4□□□□□ -0.75
CHD3-203ENST00000380358 MBD3L2Q8NHZ7 208 aaPredicted RBP10.4□□□□□ -0.75
CHD3-203ENST00000380358 SP7Q8TDD2 431 aaPredicted RBP10.4□□□□□ -0.75
CHD3-203ENST00000380358 PKIBQ9C010 78 aa10.4□□□□□ -0.75
CHD3-203ENST00000380358 A0A087WWL8 130 aa10.4□□□□□ -0.75
CHD3-203ENST00000380358 KNCNA6PVL3 124 aa10.4□□□□□ -0.75
CHD3-203ENST00000380358 FAM166AQ6J272 317 aa10.4□□□□□ -0.75
CHD3-203ENST00000380358 DEPPQ9NTK1 212 aa10.4□□□□□ -0.75
CHD3-203ENST00000380358 CHD5Q8TDI0 1954 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms