RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 A0A1W2PRS3 328 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 ATP5G3P48201 142 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 ACSF3Q4G176 576 aaPredicted RBP8.07□□□□□ -1.12
SNX1-202ENST00000380285 MYO7BQ6PIF6 2116 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 Q9H3A6 140 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 IGLV3-32A0A0A0MS00 114 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 SPRED2Q7Z698 418 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 VKORC1L1Q8N0U8 176 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 TMEM74BQ9NUR3 256 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 TSC2P49815 1807 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 LOC105371242A0A075B767 164 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 CEACAM4O75871 244 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 SPINK2P20155 84 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 NUTF2P61970 127 aaKnown RBP8.07□□□□□ -1.12
SNX1-202ENST00000380285 SRSF1Q07955 248 aaKnown RBP eCLIP8.07□□□□□ -1.12
SNX1-202ENST00000380285 TSKUQ8WUA8 353 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 CHCHD2Q9Y6H1 151 aaPredicted RBP8.07□□□□□ -1.12
SNX1-202ENST00000380285 RBMY1BA6NDE4 496 aaKnown RBP8.07□□□□□ -1.12
SNX1-202ENST00000380285 RBMY1EA6NEQ0 496 aaKnown RBP8.07□□□□□ -1.12
SNX1-202ENST00000380285 FOXI3A8MTJ6 420 aaPredicted RBP8.07□□□□□ -1.12
SNX1-202ENST00000380285 RBMY1DP0C7P1 496 aaKnown RBP8.07□□□□□ -1.12
SNX1-202ENST00000380285 RBMY1A1P0DJD3 496 aaKnown RBP8.07□□□□□ -1.12
SNX1-202ENST00000380285 RBMY1CP0DJD4 496 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 SUMO2P61956 95 aaKnown RBP8.07□□□□□ -1.12
SNX1-202ENST00000380285 CFAP161Q6P656 301 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 GPHA2Q96T91 129 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 TNFRSF18Q9Y5U5 241 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 ZNF497Q6ZNH5 498 aa8.07□□□□□ -1.12
SNX1-202ENST00000380285 ZNF784Q8NCA9 323 aaPredicted RBP8.06□□□□□ -1.12
SNX1-202ENST00000380285 CCL21O00585 134 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 FOXH1O75593 365 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 TEX38Q6PEX7 206 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 SPSB2Q99619 263 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 PILRBQ9UKJ0 227 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 TRAV24A0A0B4J272 114 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 FABP5P3A8MUU1 101 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 C17orf98A8MV24 154 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 NUDT10Q8NFP7 164 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 NUDT11Q96G61 164 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 KLK15Q9H2R5 256 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 IGHV1-69-2A0A0G2JMI3 117 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 SAP25Q8TEE9 199 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 LRRK1Q38SD2 2015 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 IGHV3-72A0A0B4J1Y9 119 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 H3BUT2 72 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 GCSAMLQ5JQS6 135 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 SLC25A48Q6ZT89 311 aaKnown RBP8.06□□□□□ -1.12
SNX1-202ENST00000380285 REG4Q9BYZ8 158 aa8.06□□□□□ -1.12
SNX1-202ENST00000380285 LHFPL1Q86WI0 220 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 OR5AN1Q8NGI8 311 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 OR2K2Q8NGT1 345 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 EPDR1Q9UM22 224 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 TCRBV4S1A1TA0A5B7 111 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 MOSP00540 346 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 EGR1P18146 543 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 TIMP3P35625 211 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 GLRX5Q86SX6 157 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 SLC25A45Q8N413 288 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 LOC101059948A0A1B0GTJ6 334 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 RPL39P5Q59GN2 51 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 HOXA3O43365 443 aaPredicted RBP8.05□□□□□ -1.12
SNX1-202ENST00000380285 LEPP41159 167 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 FAM19A2Q8N3H0 131 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 C21orf62Q9NYP8 219 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 DPM3Q9P2X0 92 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 UPK2O00526 184 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 REG1AP05451 166 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 LYL1P12980 280 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 ACTL10Q5JWF8 245 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 ZNF71Q9NQZ8 489 aaPredicted RBP8.05□□□□□ -1.12
SNX1-202ENST00000380285 MIR17HGQ75NE6 70 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 C18orf15Q96N68 181 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 MRPL27Q9P0M9 148 aaKnown RBP8.05□□□□□ -1.12
SNX1-202ENST00000380285 PTPRDP23468 1912 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 AMBPP02760 352 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 PLNP26678 52 aa8.05□□□□□ -1.12
SNX1-202ENST00000380285 C11orf68Q9H3H3 251 aaKnown RBP8.05□□□□□ -1.12
SNX1-202ENST00000380285 BEX4Q9NWD9 120 aaPredicted RBP8.05□□□□□ -1.12
SNX1-202ENST00000380285 H0YIZ8 118 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 CELA2AP08217 269 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 SPANXDQ9BXN6 97 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 CGB1A6NKQ9 187 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 ANAPC13Q9BS18 74 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 TRAV8-2A0A0B4J237 113 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 ZNF585BQ52M93 769 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 WDR83OSQ9Y284 106 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 COL4A1P02462 1669 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 DLEU1O43261 78 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 APOMO95445 188 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 SRSF3P84103 164 aaKnown RBP8.04□□□□□ -1.12
SNX1-202ENST00000380285 COQ2Q96H96 371 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 SEMA5BQ9P283 1151 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 CNTFRP26992 372 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 APOBEC3AP31941 199 aaPredicted RBP8.04□□□□□ -1.12
SNX1-202ENST00000380285 GAS1P54826 345 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 TNFRSF14Q92956 283 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 CYSLTR1Q9Y271 337 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 SBF1O95248 1867 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 A8MWV9 139 aa8.04□□□□□ -1.12
SNX1-202ENST00000380285 C1QTNF9P0C862 333 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms