RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SLC16A13Q7RTY0 426 aa15.86■□□□□ 0.13
PDLIM5-205ENST00000380180 FNDC4Q9H6D8 234 aaPredicted RBP15.86■□□□□ 0.13
PDLIM5-205ENST00000380180 VAX2Q9UIW0 290 aa15.86■□□□□ 0.13
PDLIM5-205ENST00000380180 OOSP1A8MZH6 123 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 NBR2O15453 112 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 PRR20EP86478 221 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 PRR20CP86479 221 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 PRR20DP86480 221 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 PRR20BP86481 221 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 PRR20AP86496 221 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 HES1Q14469 280 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 FBLN7Q53RD9 439 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 RBMS3Q6XE24 437 aaKnown RBP15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 MRPL41Q8IXM3 137 aaKnown RBP15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 SLC45A2Q9UMX9 530 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 IGHV4-61A0A0C4DH41 118 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 NDUFS8O00217 210 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 SNRNP70P08621 437 aaKnown RBP15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 LINC00869P0C866 280 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 UBE2E1P51965 193 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 NPBQ8NG41 125 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 NRGNQ92686 78 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 SLC35E1Q96K37 410 aa15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 POLR3KQ9Y2Y1 108 aaPredicted RBP15.85■□□□□ 0.13
PDLIM5-205ENST00000380180 LRRK2Q5S007 2527 aa15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 VWC2LB2RUY7 222 aa15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 TEX22C9J3V5 150 aa15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 TSPAN4O14817 238 aa15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 AKIRIN2Q53H80 203 aa15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 CLEC2AQ6UVW9 174 aa15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 SLC35E3Q7Z769 313 aa15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 CBLN2Q8IUK8 224 aa15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 IQCF2Q8IXL9 164 aa15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 OR2T10Q8NGZ9 312 aa15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 SRSF12Q8WXF0 261 aaKnown RBP15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 ACY3Q96HD9 319 aa15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 A1L4Q6 167 aa15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 OR10J1P30954 320 aa15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 ZNF114Q8NC26 417 aa15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 GATAD1Q8WUU5 269 aa15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 C20orf24Q9BUV8 137 aa15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 TBL2Q9Y4P3 447 aaKnown RBP15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 PUS1Q9Y606 427 aaKnown RBP eCLIP15.84■□□□□ 0.13
PDLIM5-205ENST00000380180 VPS13CQ709C8 3753 aa15.83■□□□□ 0.12
PDLIM5-205ENST00000380180 NDUFA3O95167 84 aa15.83■□□□□ 0.12
PDLIM5-205ENST00000380180 IGHV3-48P01763 117 aa15.83■□□□□ 0.12
PDLIM5-205ENST00000380180 COX6B1P14854 86 aa15.83■□□□□ 0.12
PDLIM5-205ENST00000380180 MFAP2P55001 183 aa15.83■□□□□ 0.12
PDLIM5-205ENST00000380180 C19orf35Q6ZS72 473 aa15.83■□□□□ 0.12
PDLIM5-205ENST00000380180 ABHD5Q8WTS1 349 aa15.83■□□□□ 0.12
PDLIM5-205ENST00000380180 ABCA1O95477 2261 aa15.83■□□□□ 0.12
PDLIM5-205ENST00000380180 M0R036 132 aa15.82■□□□□ 0.12
PDLIM5-205ENST00000380180 GATA2P23769 480 aaPredicted RBP15.82■□□□□ 0.12
PDLIM5-205ENST00000380180 AWAT1Q58HT5 328 aa15.82■□□□□ 0.12
PDLIM5-205ENST00000380180 PVRIGQ6DKI7 326 aa15.82■□□□□ 0.12
PDLIM5-205ENST00000380180 PERPQ96FX8 193 aa15.82■□□□□ 0.12
PDLIM5-205ENST00000380180 SEPSECSQ9HD40 501 aaKnown RBP15.82■□□□□ 0.12
PDLIM5-205ENST00000380180 IGHV4-30-2A0A087WSY4 118 aa15.82■□□□□ 0.12
PDLIM5-205ENST00000380180 CNIH1O95406 144 aa15.82■□□□□ 0.12
PDLIM5-205ENST00000380180 PSMB3P49720 205 aa15.82■□□□□ 0.12
PDLIM5-205ENST00000380180 TMEM249Q2WGJ8 235 aa15.82■□□□□ 0.12
PDLIM5-205ENST00000380180 MALSU1Q96EH3 234 aa15.82■□□□□ 0.12
PDLIM5-205ENST00000380180 AJUBAQ96IF1 538 aa15.82■□□□□ 0.12
PDLIM5-205ENST00000380180 STAG3L2P0CL84 134 aa15.81■□□□□ 0.12
PDLIM5-205ENST00000380180 STAG3L3P0CL85 134 aa15.81■□□□□ 0.12
PDLIM5-205ENST00000380180 CD81P60033 236 aa15.81■□□□□ 0.12
PDLIM5-205ENST00000380180 MEF2BQ02080 365 aaPredicted RBP15.81■□□□□ 0.12
PDLIM5-205ENST00000380180 OR1P1Q8NH06 330 aa15.81■□□□□ 0.12
PDLIM5-205ENST00000380180 NPIPB3Q92617 1050 aa15.81■□□□□ 0.12
PDLIM5-205ENST00000380180 MISP3Q96FF7 219 aa15.81■□□□□ 0.12
PDLIM5-205ENST00000380180 RPS10P5Q9NQ39 176 aa15.81■□□□□ 0.12
PDLIM5-205ENST00000380180 MANBALQ9NQG1 85 aa15.81■□□□□ 0.12
PDLIM5-205ENST00000380180 SVEP1Q4LDE5 3571 aa15.8■□□□□ 0.12
PDLIM5-205ENST00000380180 C7orf77A4D0Y5 90 aa15.8■□□□□ 0.12
PDLIM5-205ENST00000380180 H3BQ15 152 aa15.8■□□□□ 0.12
PDLIM5-205ENST00000380180 AKR1C3P42330 323 aa15.8■□□□□ 0.12
PDLIM5-205ENST00000380180 RHOBP62745 196 aa15.8■□□□□ 0.12
PDLIM5-205ENST00000380180 EBI3Q14213 229 aa15.8■□□□□ 0.12
PDLIM5-205ENST00000380180 FAM90A2PQ658T7 463 aa15.8■□□□□ 0.12
PDLIM5-205ENST00000380180 MRPL36Q9P0J6 103 aaKnown RBP15.8■□□□□ 0.12
PDLIM5-205ENST00000380180 PAGE4O60829 102 aa15.8■□□□□ 0.12
PDLIM5-205ENST00000380180 ARL14EPLP0DKL9 152 aa15.8■□□□□ 0.12
PDLIM5-205ENST00000380180 SAA4P35542 130 aa15.8■□□□□ 0.12
PDLIM5-205ENST00000380180 PAX8Q06710 450 aa15.8■□□□□ 0.12
PDLIM5-205ENST00000380180 C5orf64Q2M2E5 130 aa15.8■□□□□ 0.12
PDLIM5-205ENST00000380180 SPATA31B1PQ5VZV4 182 aa15.8■□□□□ 0.12
PDLIM5-205ENST00000380180 Q8N6K4 173 aa15.8■□□□□ 0.12
PDLIM5-205ENST00000380180 F11RQ9Y624 299 aaKnown RBP15.8■□□□□ 0.12
PDLIM5-205ENST00000380180 TAGLN2P37802 199 aaKnown RBP15.79■□□□□ 0.12
PDLIM5-205ENST00000380180 ETFRF1Q6IPR1 90 aa15.79■□□□□ 0.12
PDLIM5-205ENST00000380180 SLC25A33Q9BSK2 321 aa15.79■□□□□ 0.12
PDLIM5-205ENST00000380180 CRYGCP07315 174 aa15.78■□□□□ 0.12
PDLIM5-205ENST00000380180 FXYD3Q14802 87 aa15.78■□□□□ 0.12
PDLIM5-205ENST00000380180 RUSC1-AS1Q66K80 236 aa15.78■□□□□ 0.12
PDLIM5-205ENST00000380180 SPNS3Q6ZMD2 512 aa15.78■□□□□ 0.12
PDLIM5-205ENST00000380180 CYP2G1PQ6ZSU1 146 aa15.78■□□□□ 0.12
PDLIM5-205ENST00000380180 DMRT1Q9Y5R6 373 aa15.78■□□□□ 0.12
PDLIM5-205ENST00000380180 CENPVL3A0A0U1RRI6 287 aa15.78■□□□□ 0.12
PDLIM5-205ENST00000380180 NCBP2LA6PVI3 153 aaKnown RBP15.78■□□□□ 0.12
PDLIM5-205ENST00000380180 CXorf1O96002 111 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms