RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 NPIPB3Q92617 1050 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 PPIAL4AQ9Y536 164 aa9.42□□□□□ -0.9
SMAD9-202ENST00000379826 NPIPB11E5RHQ5 1161 aa9.41□□□□□ -0.9
SMAD9-202ENST00000379826 PF4V1P10720 104 aa9.41□□□□□ -0.9
SMAD9-202ENST00000379826 KRTAP27-1Q3LI81 207 aa9.41□□□□□ -0.9
SMAD9-202ENST00000379826 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.41□□□□□ -0.9
SMAD9-202ENST00000379826 MLNRO43193 412 aa9.41□□□□□ -0.9
SMAD9-202ENST00000379826 BTF3P20290 206 aaKnown RBP9.41□□□□□ -0.9
SMAD9-202ENST00000379826 RPL8P62917 257 aaKnown RBP9.41□□□□□ -0.9
SMAD9-202ENST00000379826 Q6ZSR3 168 aa9.41□□□□□ -0.9
SMAD9-202ENST00000379826 Q71RC1 249 aaPredicted RBP9.41□□□□□ -0.9
SMAD9-202ENST00000379826 WDR31Q8NA23 367 aa9.41□□□□□ -0.9
SMAD9-202ENST00000379826 BEND2Q8NDZ0 799 aa9.41□□□□□ -0.9
SMAD9-202ENST00000379826 OR8A1Q8NGG7 326 aa9.41□□□□□ -0.9
SMAD9-202ENST00000379826 OR5AL1P0C617 328 aa9.41□□□□□ -0.9
SMAD9-202ENST00000379826 PRB3Q04118 309 aaPredicted RBP9.41□□□□□ -0.9
SMAD9-202ENST00000379826 C9orf106Q8NAJ2 232 aa9.41□□□□□ -0.9
SMAD9-202ENST00000379826 OR10W1Q8NGF6 305 aa9.41□□□□□ -0.9
SMAD9-202ENST00000379826 LRP4O75096 1905 aa9.41□□□□□ -0.9
SMAD9-202ENST00000379826 TNFSF13O75888 250 aa9.4□□□□□ -0.9
SMAD9-202ENST00000379826 ARL3P36405 182 aa9.4□□□□□ -0.9
SMAD9-202ENST00000379826 UQCRFS1P47985 274 aa9.4□□□□□ -0.9
SMAD9-202ENST00000379826 LINC00305Q7Z4B0 112 aa9.4□□□□□ -0.9
SMAD9-202ENST00000379826 ZNF738Q8NE65 137 aa9.4□□□□□ -0.9
SMAD9-202ENST00000379826 NEU1Q99519 415 aa9.4□□□□□ -0.9
SMAD9-202ENST00000379826 CDC42EP3Q9UKI2 254 aa9.4□□□□□ -0.9
SMAD9-202ENST00000379826 F2Z2F3 143 aa9.4□□□□□ -0.9
SMAD9-202ENST00000379826 TMEM177Q53S58 311 aa9.4□□□□□ -0.9
SMAD9-202ENST00000379826 YPEL4Q96NS1 127 aa9.4□□□□□ -0.9
SMAD9-202ENST00000379826 EP300Q09472 2414 aaPredicted RBP9.4□□□□□ -0.9
SMAD9-202ENST00000379826 Q6ZWC4 215 aa9.4□□□□□ -0.91
SMAD9-202ENST00000379826 GRAMD2BQ96HH9 432 aa9.4□□□□□ -0.91
SMAD9-202ENST00000379826 ZNF714Q96N38 554 aa9.4□□□□□ -0.91
SMAD9-202ENST00000379826 TMEM191AQ9H0A3 160 aa9.4□□□□□ -0.91
SMAD9-202ENST00000379826 KIAA2026Q5HYC2 2103 aa9.4□□□□□ -0.91
SMAD9-202ENST00000379826 SLC25A17O43808 307 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 NUPR1O60356 82 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 CSN1S1P47710 185 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 RALYQ9UKM9 306 aaKnown RBP9.39□□□□□ -0.91
SMAD9-202ENST00000379826 SPTA1P02549 2419 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 SNAI2O43623 268 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 TGFAP01135 160 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 IGLV2-14P01704 120 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 ACSF3Q4G176 576 aaPredicted RBP9.39□□□□□ -0.91
SMAD9-202ENST00000379826 ZNF430Q9H8G1 570 aaPredicted RBP9.39□□□□□ -0.91
SMAD9-202ENST00000379826 HIF1ANQ9NWT6 349 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 LAMA2P24043 3122 aaKnown RBP9.39□□□□□ -0.91
SMAD9-202ENST00000379826 RELBQ01201 579 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 DIRC2Q96SL1 478 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 IFI27L2Q9H2X8 130 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 ADAMTS9Q9P2N4 1935 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 IZUMO1RA6ND01 250 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 J3QW42 95 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 MLANAQ16655 118 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 OR4F17Q8NGA8 305 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 OR9G1Q8NH87 305 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 SPTBN2O15020 2390 aa9.39□□□□□ -0.91
SMAD9-202ENST00000379826 SAA1P0DJI8 122 aaPredicted RBP9.39□□□□□ -0.91
SMAD9-202ENST00000379826 MRPL20Q9BYC9 149 aaKnown RBP9.39□□□□□ -0.91
SMAD9-202ENST00000379826 GNB1LQ9BYB4 327 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 CLEC5AQ9NY25 188 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 ZNRD1Q9P1U0 126 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 IGHV1-18A0A0C4DH31 117 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 ZNF324O75467 553 aaPredicted RBP9.38□□□□□ -0.91
SMAD9-202ENST00000379826 FAM222BQ8WU58 562 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 FAM168AQ92567 244 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 LAMTOR2Q9Y2Q5 125 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 CPAMD8Q8IZJ3 1885 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 KBTBD11-OT1A0A1B0GTJ5 212 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 BMPR1BO00238 502 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 DLEU1O43261 78 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 LEMD1Q68G75 181 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 Q6ZR03 302 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 TCF24Q7RTU0 167 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 VSTM2AQ8TAG5 236 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 RBM14Q96PK6 669 aaKnown RBP9.38□□□□□ -0.91
SMAD9-202ENST00000379826 TMEM208Q9BTX3 173 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 MBNL3Q9NUK0 354 aaKnown RBP9.38□□□□□ -0.91
SMAD9-202ENST00000379826 NCBP2LA6PVI3 153 aaKnown RBP9.38□□□□□ -0.91
SMAD9-202ENST00000379826 F2RL2O00254 374 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 YPEL1O60688 119 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 SS18L1O75177 396 aaPredicted RBP9.38□□□□□ -0.91
SMAD9-202ENST00000379826 LEPROTL1O95214 131 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 LCN12Q6JVE5 192 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 YPEL2Q96QA6 119 aa9.38□□□□□ -0.91
SMAD9-202ENST00000379826 HIGD1CA8MV81 97 aa9.37□□□□□ -0.91
SMAD9-202ENST00000379826 PEX7O00628 323 aa9.37□□□□□ -0.91
SMAD9-202ENST00000379826 RNFT1Q5M7Z0 435 aa9.37□□□□□ -0.91
SMAD9-202ENST00000379826 C19orf35Q6ZS72 473 aa9.37□□□□□ -0.91
SMAD9-202ENST00000379826 HIGD1AQ9Y241 93 aa9.37□□□□□ -0.91
SMAD9-202ENST00000379826 RPEQ96AT9 228 aa9.37□□□□□ -0.91
SMAD9-202ENST00000379826 SNRNP40Q96DI7 357 aaKnown RBP9.37□□□□□ -0.91
SMAD9-202ENST00000379826 FBXL7Q9UJT9 491 aa9.37□□□□□ -0.91
SMAD9-202ENST00000379826 TRAV9-1A0A075B6T8 112 aa9.37□□□□□ -0.91
SMAD9-202ENST00000379826 NPSP0C0P6 89 aa9.37□□□□□ -0.91
SMAD9-202ENST00000379826 ZNF295-AS1Q8N0V1 137 aa9.37□□□□□ -0.91
SMAD9-202ENST00000379826 HYPMO75409 117 aa9.37□□□□□ -0.91
SMAD9-202ENST00000379826 RASL11BQ9BPW5 248 aa9.37□□□□□ -0.91
SMAD9-202ENST00000379826 PMCHL2Q9BQD1 86 aa9.37□□□□□ -0.91
SMAD9-202ENST00000379826 TEX50A0A1B0GTY4 177 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms