RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 TMEM222Q9H0R3 208 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 B9A039 149 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 DEFB130BP0DP73 79 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 DEFB130AP0DP74 79 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 SLC25A28Q96A46 364 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 RFLNBQ8N5W9 214 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 GATAD1Q8WUU5 269 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 ACTL10Q5JWF8 245 aa11.23□□□□□ -0.61
HIPK3-202ENST00000379016 CD5P06127 495 aa11.22□□□□□ -0.61
HIPK3-202ENST00000379016 IMMP1LQ96LU5 166 aa11.22□□□□□ -0.61
HIPK3-202ENST00000379016 SMIM2Q9BVW6 85 aa11.22□□□□□ -0.61
HIPK3-202ENST00000379016 TDRD15B5MCY1 1934 aaKnown RBP11.22□□□□□ -0.61
HIPK3-202ENST00000379016 ALPK2Q86TB3 2170 aa11.22□□□□□ -0.61
HIPK3-202ENST00000379016 F8VVB4 439 aa11.22□□□□□ -0.61
HIPK3-202ENST00000379016 F8VWA3 439 aa11.22□□□□□ -0.61
HIPK3-202ENST00000379016 CACNG8Q8WXS5 425 aa11.22□□□□□ -0.61
HIPK3-202ENST00000379016 DSCR8Q96T75 97 aa11.22□□□□□ -0.61
HIPK3-202ENST00000379016 SPTBN2O15020 2390 aa11.22□□□□□ -0.61
HIPK3-202ENST00000379016 RBM3P98179 157 aaKnown RBP11.22□□□□□ -0.61
HIPK3-202ENST00000379016 C1QTNF12Q5T7M4 302 aa11.22□□□□□ -0.61
HIPK3-202ENST00000379016 ATG4DQ86TL0 474 aaPredicted RBP11.22□□□□□ -0.61
HIPK3-202ENST00000379016 PKIBQ9C010 78 aa11.22□□□□□ -0.61
HIPK3-202ENST00000379016 RNASE7Q9H1E1 156 aaKnown RBP11.22□□□□□ -0.61
HIPK3-202ENST00000379016 DPM3Q9P2X0 92 aa11.22□□□□□ -0.61
HIPK3-202ENST00000379016 ATP5L2Q7Z4Y8 100 aa11.22□□□□□ -0.61
HIPK3-202ENST00000379016 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.22□□□□□ -0.617e-8■■■□□ 16.4
HIPK3-202ENST00000379016 GATA2P23769 480 aaPredicted RBP11.22□□□□□ -0.61
HIPK3-202ENST00000379016 CACNA1GO43497 2377 aa11.22□□□□□ -0.61
HIPK3-202ENST00000379016 FAM90A18PA6NE21 464 aa11.21□□□□□ -0.61
HIPK3-202ENST00000379016 FAM90A16PA6NEW6 464 aa11.21□□□□□ -0.61
HIPK3-202ENST00000379016 FAM90A9PA6NNJ1 464 aa11.21□□□□□ -0.61
HIPK3-202ENST00000379016 FAM90A5PA8MXJ8 464 aa11.21□□□□□ -0.61
HIPK3-202ENST00000379016 FAM90A15PP0C7V4 464 aa11.21□□□□□ -0.61
HIPK3-202ENST00000379016 FAM90A14PP0C7W9 464 aa11.21□□□□□ -0.61
HIPK3-202ENST00000379016 SEC61GP60059 68 aa11.21□□□□□ -0.61
HIPK3-202ENST00000379016 RASL10AQ92737 203 aa11.21□□□□□ -0.61
HIPK3-202ENST00000379016 KIAA1217Q5T5P2 1943 aa11.21□□□□□ -0.61
HIPK3-202ENST00000379016 UMODP07911 640 aa11.21□□□□□ -0.61
HIPK3-202ENST00000379016 FAM201AQ5SY85 155 aa11.21□□□□□ -0.61
HIPK3-202ENST00000379016 TEX43Q6ZNM6 134 aa11.21□□□□□ -0.61
HIPK3-202ENST00000379016 SLC25A38Q96DW6 304 aa11.21□□□□□ -0.61
HIPK3-202ENST00000379016 PRDM13Q9H4Q3 707 aa11.21□□□□□ -0.61
HIPK3-202ENST00000379016 GAS1P54826 345 aa11.21□□□□□ -0.62
HIPK3-202ENST00000379016 UCP3P55916 312 aa11.21□□□□□ -0.62
HIPK3-202ENST00000379016 RPL36AP83881 106 aaKnown RBP11.21□□□□□ -0.62
HIPK3-202ENST00000379016 DMKNQ6E0U4 476 aaPredicted RBP11.21□□□□□ -0.62
HIPK3-202ENST00000379016 RPL36ALQ969Q0 106 aaKnown RBP11.21□□□□□ -0.62
HIPK3-202ENST00000379016 F5H768 121 aa11.2□□□□□ -0.62
HIPK3-202ENST00000379016 CA7P43166 264 aa11.2□□□□□ -0.62
HIPK3-202ENST00000379016 UBE2BP63146 152 aa11.2□□□□□ -0.62
HIPK3-202ENST00000379016 CD300CQ08708 224 aa11.2□□□□□ -0.62
HIPK3-202ENST00000379016 DRAM1Q8N682 238 aa11.2□□□□□ -0.62
HIPK3-202ENST00000379016 C8orf31Q8N9H6 132 aa11.2□□□□□ -0.62
HIPK3-202ENST00000379016 SMRP1Q8NCR6 262 aa11.2□□□□□ -0.62
HIPK3-202ENST00000379016 CRYBA2P53672 197 aa11.2□□□□□ -0.62
HIPK3-202ENST00000379016 CRYGNQ8WXF5 182 aa11.2□□□□□ -0.62
HIPK3-202ENST00000379016 ASCL2Q99929 193 aa11.2□□□□□ -0.62
HIPK3-202ENST00000379016 TFF3Q07654 80 aa11.2□□□□□ -0.62
HIPK3-202ENST00000379016 NUP98P52948 1817 aa11.2□□□□□ -0.62
HIPK3-202ENST00000379016 A0A0J9YW62 118 aa11.2□□□□□ -0.62
HIPK3-202ENST00000379016 ZNF729A6NN14 1252 aaPredicted RBP11.2□□□□□ -0.62
HIPK3-202ENST00000379016 BHLHA9Q7RTU4 235 aa11.2□□□□□ -0.62
HIPK3-202ENST00000379016 SPRED2Q7Z698 418 aa11.2□□□□□ -0.62
HIPK3-202ENST00000379016 JPT1Q9UK76 154 aa11.2□□□□□ -0.62
HIPK3-202ENST00000379016 C14orf132Q9NPU4 83 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 INAFM2P0DMQ5 153 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 PEBP1P30086 187 aaKnown RBP11.19□□□□□ -0.62
HIPK3-202ENST00000379016 OVOL2Q9BRP0 275 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 DKK4Q9UBT3 224 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 LRRK1Q38SD2 2015 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 CXCL2P19875 107 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 PFN2P35080 140 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 LAGE3Q14657 143 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 OR10W1Q8NGF6 305 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 PRDM6Q9NQX0 595 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 MCM3APO60318 1980 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 A0A1B0GW15 77 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 RSPO4Q2I0M5 234 aaPredicted RBP11.19□□□□□ -0.62
HIPK3-202ENST00000379016 ZIC4Q8N9L1 334 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 SPXQ9BT56 116 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 TEX48A0A1B0GUV7 120 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 FAM90A7PA6NKC0 464 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 FAM90A22PA8MWA6 464 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 FAM90A12PA8MX19 464 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 FAM90A23PA8MXZ1 464 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 BSPH1Q075Z2 132 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 C8orf82Q6P1X6 216 aaPredicted RBP11.19□□□□□ -0.62
HIPK3-202ENST00000379016 SIGLEC15Q6ZMC9 328 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 PRIMA1Q86XR5 153 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 DMRTC2Q8IXT2 367 aaPredicted RBP11.19□□□□□ -0.62
HIPK3-202ENST00000379016 DOT1LQ8TEK3 1739 aa11.19□□□□□ -0.62
HIPK3-202ENST00000379016 NEU4Q8WWR8 484 aaPredicted RBP11.19□□□□□ -0.62
HIPK3-202ENST00000379016 KCNE1BA0A087WTH5 132 aa11.18□□□□□ -0.62
HIPK3-202ENST00000379016 SOCS3O14543 225 aa11.18□□□□□ -0.62
HIPK3-202ENST00000379016 ITGBL1O95965 494 aaPredicted RBP11.18□□□□□ -0.62
HIPK3-202ENST00000379016 NBL1P41271 181 aa11.18□□□□□ -0.62
HIPK3-202ENST00000379016 Q6ZNB5 142 aa11.18□□□□□ -0.62
HIPK3-202ENST00000379016 PDCD11Q14690 1871 aaKnown RBP11.18□□□□□ -0.62
HIPK3-202ENST00000379016 J3QW42 95 aa11.18□□□□□ -0.62
HIPK3-202ENST00000379016 HMGA2P52926 109 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms