RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 AREGP15514 252 aa11.84□□□□□ -0.51
RAB3IP-203ENST00000378809 LGALS4P56470 323 aa11.84□□□□□ -0.51
RAB3IP-203ENST00000378809 FAM78BQ5VT40 261 aa11.84□□□□□ -0.51
RAB3IP-203ENST00000378809 SPATA31B1PQ5VZV4 182 aa11.84□□□□□ -0.51
RAB3IP-203ENST00000378809 SPNS3Q6ZMD2 512 aa11.84□□□□□ -0.51
RAB3IP-203ENST00000378809 KIR3DL3Q8N743 410 aa11.84□□□□□ -0.51
RAB3IP-203ENST00000378809 SMIM7Q9BQ49 75 aa11.84□□□□□ -0.51
RAB3IP-203ENST00000378809 CACNA1BQ00975 2339 aa11.84□□□□□ -0.51
RAB3IP-203ENST00000378809 IGHV4-39P01824 125 aa11.83□□□□□ -0.52
RAB3IP-203ENST00000378809 STAG3L2P0CL84 134 aa11.83□□□□□ -0.52
RAB3IP-203ENST00000378809 STAG3L3P0CL85 134 aa11.83□□□□□ -0.52
RAB3IP-203ENST00000378809 RNF224P0DH78 156 aa11.83□□□□□ -0.52
RAB3IP-203ENST00000378809 HOXB4P17483 251 aaPredicted RBP11.83□□□□□ -0.52
RAB3IP-203ENST00000378809 MAS1LP35410 378 aa11.83□□□□□ -0.52
RAB3IP-203ENST00000378809 C19orf35Q6ZS72 473 aa11.83□□□□□ -0.52
RAB3IP-203ENST00000378809 C1orf122Q6ZSJ8 110 aa11.83□□□□□ -0.52
RAB3IP-203ENST00000378809 C15orf54Q8N8G6 183 aa11.83□□□□□ -0.52
RAB3IP-203ENST00000378809 FNDC4Q9H6D8 234 aaPredicted RBP11.83□□□□□ -0.52
RAB3IP-203ENST00000378809 FCN1O00602 326 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 CNIH1O95406 144 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 MT-CO2P00403 227 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 LINC00869P0C866 280 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 KIAA0141Q14154 515 aaPredicted RBP11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 NPIPB3Q92617 1050 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 RNF5Q99942 180 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 LPAR2Q9HBW0 351 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 MLXQ9UH92 298 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 IGHV2-70DA0A0C4DH43 119 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 COLCA2A8K830 154 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 TOX4O94842 621 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 OR2C1O95371 312 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 MOSP00540 346 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 PDLIM4P50479 330 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 NANPQ8TBE9 248 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 SRSF12Q8WXF0 261 aaKnown RBP11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 CFHR4Q92496 578 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 ASH1LQ9NR48 2969 aaKnown RBP11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 SVEP1Q4LDE5 3571 aa11.82□□□□□ -0.52
RAB3IP-203ENST00000378809 TMEM250H0YL14 139 aa11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 NBR2O15453 112 aa11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 ATP5G3P48201 142 aa11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 SSBP2P81877 361 aaPredicted RBP11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 CCDC144NLQ6NUI1 221 aa11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 PARLQ9H300 379 aa11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 IGHV3-21A0A0B4J1V1 117 aa11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 FOXH1O75593 365 aa11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 RND2P52198 227 aa11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 LMO4P61968 165 aa11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 PNRC1Q12796 327 aaPredicted RBP11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 TMEM249Q2WGJ8 235 aa11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 CYP2G1PQ6ZSU1 146 aa11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 MIR17HGQ75NE6 70 aa11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 FAM24BQ8N5W8 94 aa11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 BBC3Q96PG8 261 aaPredicted RBP11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 SIRPDQ9H106 197 aa11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 TUBA4BQ9H853 241 aa11.81□□□□□ -0.52
RAB3IP-203ENST00000378809 TEX22C9J3V5 150 aa11.8□□□□□ -0.52
RAB3IP-203ENST00000378809 CRYBA1P05813 215 aa11.8□□□□□ -0.52
RAB3IP-203ENST00000378809 GCHFRP30047 84 aa11.8□□□□□ -0.52
RAB3IP-203ENST00000378809 ETFRF1Q6IPR1 90 aa11.8□□□□□ -0.52
RAB3IP-203ENST00000378809 HIST1H2BAQ96A08 127 aa11.8□□□□□ -0.52
RAB3IP-203ENST00000378809 EAF1Q96JC9 268 aaPredicted RBP11.8□□□□□ -0.52
RAB3IP-203ENST00000378809 FUT9Q9Y231 359 aa11.8□□□□□ -0.52
RAB3IP-203ENST00000378809 AKAP6Q13023 2319 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 MFAP2P55001 183 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 PAX2Q02962 417 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 ADIRFQ15847 76 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 DYNAPQ8N1N2 210 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 ZNF114Q8NC26 417 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 OR51G1Q8NGK1 321 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 C22orf15Q8WYQ4 148 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 SLC25A33Q9BSK2 321 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 SDF2L1Q9HCN8 221 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 MRPL36Q9P0J6 103 aaKnown RBP11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 DOK5Q9P104 306 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 NAT8Q9UHE5 227 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 NCBP2LA6PVI3 153 aaKnown RBP11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 PDE6DO43924 150 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 GOSR1O95249 250 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 MT-ND4LP03901 98 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 ZNF90Q03938 601 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 TMEM241Q24JQ0 296 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 MINOS1Q5TGZ0 78 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 OR2T10Q8NGZ9 312 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 OR1P1Q8NH06 330 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 FAM168AQ92567 244 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 PIMREGQ9BSJ6 248 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 MINOS1-NBL1R4GNA1 71 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 URGCP-MRPS24S4R325 110 aa11.79□□□□□ -0.52
RAB3IP-203ENST00000378809 SPTAN1Q13813 2472 aaKnown RBP11.78□□□□□ -0.52
RAB3IP-203ENST00000378809 A0A087WWC5 75 aa11.78□□□□□ -0.52
RAB3IP-203ENST00000378809 B4DEV8 164 aa11.78□□□□□ -0.52
RAB3IP-203ENST00000378809 OR7C2O60412 319 aa11.78□□□□□ -0.52
RAB3IP-203ENST00000378809 HABP2Q14520 560 aaPredicted RBP11.78□□□□□ -0.52
RAB3IP-203ENST00000378809 FBLN7Q53RD9 439 aa11.78□□□□□ -0.52
RAB3IP-203ENST00000378809 F11RQ9Y624 299 aaKnown RBP11.78□□□□□ -0.52
RAB3IP-203ENST00000378809 USP24Q9UPU5 2620 aa11.78□□□□□ -0.52
RAB3IP-203ENST00000378809 VPS13CQ709C8 3753 aa11.78□□□□□ -0.52
RAB3IP-203ENST00000378809 TCRBV4S1A1TA0A5B7 111 aa11.77□□□□□ -0.52
RAB3IP-203ENST00000378809 CORTO00230 105 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms