RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 OR52E5Q8NH55 327 aa16.77■□□□□ 0.28
SRM-201ENST00000376957 TRIM63Q969Q1 353 aa16.77■□□□□ 0.28
SRM-201ENST00000376957 PINX1Q96BK5 328 aaKnown RBP16.77■□□□□ 0.28
SRM-201ENST00000376957 ZNF436Q9C0F3 470 aaPredicted RBP16.77■□□□□ 0.28
SRM-201ENST00000376957 MRPL27Q9P0M9 148 aaKnown RBP16.77■□□□□ 0.28
SRM-201ENST00000376957 TMEM56-RWDD3S4R434 201 aa16.77■□□□□ 0.28
SRM-201ENST00000376957 IGHV3-21A0A0B4J1V1 117 aa16.76■□□□□ 0.27
SRM-201ENST00000376957 K7EIM0 57 aa16.76■□□□□ 0.27
SRM-201ENST00000376957 NDUFA4O00483 81 aa16.76■□□□□ 0.27
SRM-201ENST00000376957 GNG7O60262 68 aa16.76■□□□□ 0.27
SRM-201ENST00000376957 NPBWR1P48145 328 aa16.76■□□□□ 0.27
SRM-201ENST00000376957 GUCA2BQ16661 112 aa16.76■□□□□ 0.27
SRM-201ENST00000376957 ANKRD55Q3KP44 614 aa16.76■□□□□ 0.27
SRM-201ENST00000376957 TRIQKQ629K1 86 aa16.76■□□□□ 0.27
SRM-201ENST00000376957 DUSP18Q8NEJ0 188 aa16.76■□□□□ 0.27
SRM-201ENST00000376957 TUBA4BQ9H853 241 aa16.76■□□□□ 0.27
SRM-201ENST00000376957 MT-CO2P00403 227 aa16.75■□□□□ 0.27
SRM-201ENST00000376957 FRMD6-AS1P0C7T7 363 aa16.75■□□□□ 0.27
SRM-201ENST00000376957 ZNF79Q15937 498 aa16.75■□□□□ 0.27
SRM-201ENST00000376957 SPINK9Q5DT21 86 aa16.75■□□□□ 0.27
SRM-201ENST00000376957 TMED4Q7Z7H5 227 aa16.75■□□□□ 0.27
SRM-201ENST00000376957 LGI3Q8N145 548 aa16.75■□□□□ 0.27
SRM-201ENST00000376957 UXS1Q8NBZ7 420 aa16.75■□□□□ 0.27
SRM-201ENST00000376957 ZMAT4Q9H898 229 aa16.75■□□□□ 0.27
SRM-201ENST00000376957 DAZ1Q9NQZ3 744 aaKnown RBP16.75■□□□□ 0.27
SRM-201ENST00000376957 CACNG5Q9UF02 275 aa16.75■□□□□ 0.27
SRM-201ENST00000376957 DNAH3Q8TD57 4116 aa16.74■□□□□ 0.27
SRM-201ENST00000376957 IGHV3-35A0A0C4DH35 117 aa16.74■□□□□ 0.27
SRM-201ENST00000376957 CENPXA8MT69 81 aa16.74■□□□□ 0.27
SRM-201ENST00000376957 IGHV4-30-4P0DP06 118 aa16.74■□□□□ 0.27
SRM-201ENST00000376957 FCGR2BP31994 310 aaPredicted RBP16.74■□□□□ 0.27
SRM-201ENST00000376957 TMEM128Q5BJH2 165 aa16.74■□□□□ 0.27
SRM-201ENST00000376957 RBPMS2Q6ZRY4 209 aaKnown RBP16.74■□□□□ 0.27
SRM-201ENST00000376957 ASCL2Q99929 193 aa16.74■□□□□ 0.27
SRM-201ENST00000376957 C20orf24Q9BUV8 137 aa16.74■□□□□ 0.27
SRM-201ENST00000376957 HIPK2Q9H2X6 1198 aa16.74■□□□□ 0.27
SRM-201ENST00000376957 A0A0B4J2A0 478 aa16.73■□□□□ 0.27
SRM-201ENST00000376957 TMEM213A2RRL7 107 aa16.73■□□□□ 0.27
SRM-201ENST00000376957 NAP1L6A6NFF2 107 aa16.73■□□□□ 0.27
SRM-201ENST00000376957 A8MZ25 164 aa16.73■□□□□ 0.27
SRM-201ENST00000376957 I3L2K1 104 aa16.73■□□□□ 0.27
SRM-201ENST00000376957 SULT1A3P0DMM9 295 aa16.73■□□□□ 0.27
SRM-201ENST00000376957 SULT1A4P0DMN0 295 aa16.73■□□□□ 0.27
SRM-201ENST00000376957 HTR2BP41595 481 aa16.73■□□□□ 0.27
SRM-201ENST00000376957 TMEM187Q14656 261 aa16.73■□□□□ 0.27
SRM-201ENST00000376957 TM4SF20Q53R12 229 aa16.73■□□□□ 0.27
SRM-201ENST00000376957 SLC16A13Q7RTY0 426 aa16.73■□□□□ 0.27
SRM-201ENST00000376957 NOXA1Q86UR1 476 aa16.73■□□□□ 0.27
SRM-201ENST00000376957 Q8N1Y9 231 aa16.73■□□□□ 0.27
SRM-201ENST00000376957 TMEM190Q8WZ59 177 aa16.73■□□□□ 0.27
SRM-201ENST00000376957 HEYLQ9NQ87 328 aaPredicted RBP16.73■□□□□ 0.27
SRM-201ENST00000376957 SHPKQ9UHJ6 478 aa16.73■□□□□ 0.27
SRM-201ENST00000376957 U3KQK5 164 aa16.73■□□□□ 0.27
SRM-201ENST00000376957 TRAV25A0A0B4J276 109 aa16.72■□□□□ 0.27
SRM-201ENST00000376957 CEBPZOSA8MTT3 80 aa16.72■□□□□ 0.27
SRM-201ENST00000376957 CD81P60033 236 aa16.72■□□□□ 0.27
SRM-201ENST00000376957 AARDQ4LEZ3 155 aa16.72■□□□□ 0.27
SRM-201ENST00000376957 LAMTOR1Q6IAA8 161 aa16.72■□□□□ 0.27
SRM-201ENST00000376957 UNQ9165/PRO28630Q6UXU0 137 aa16.72■□□□□ 0.27
SRM-201ENST00000376957 ADAMTSL5Q6ZMM2 481 aa16.72■□□□□ 0.27
SRM-201ENST00000376957 LHFPL5Q8TAF8 219 aa16.72■□□□□ 0.27
SRM-201ENST00000376957 GPR146Q96CH1 333 aa16.72■□□□□ 0.27
SRM-201ENST00000376957 SRRQ9GZT4 340 aa16.72■□□□□ 0.27
SRM-201ENST00000376957 A0A0G2JRQ6 117 aa16.71■□□□□ 0.27
SRM-201ENST00000376957 DUXBA0A1W2PPF3 345 aa16.71■□□□□ 0.27
SRM-201ENST00000376957 RPS10-NUDT3A0A1W2PQS6 291 aa16.71■□□□□ 0.27
SRM-201ENST00000376957 IZUMO1RA6ND01 250 aa16.71■□□□□ 0.27
SRM-201ENST00000376957 K7EMT4 169 aa16.71■□□□□ 0.27
SRM-201ENST00000376957 YIF1AO95070 293 aa16.71■□□□□ 0.27
SRM-201ENST00000376957 CCR6P51684 374 aa16.71■□□□□ 0.27
SRM-201ENST00000376957 RBMS2Q15434 407 aaKnown RBP16.71■□□□□ 0.27
SRM-201ENST00000376957 C11orf87Q6NUJ2 197 aa16.71■□□□□ 0.27
SRM-201ENST00000376957 Q6ZRM9 215 aa16.71■□□□□ 0.27
SRM-201ENST00000376957 CACNG8Q8WXS5 425 aa16.71■□□□□ 0.27
SRM-201ENST00000376957 TMEM230Q96A57 120 aa16.71■□□□□ 0.27
SRM-201ENST00000376957 NEURL2Q9BR09 285 aa16.71■□□□□ 0.27
SRM-201ENST00000376957 C15orf62A8K5M9 175 aa16.7■□□□□ 0.26
SRM-201ENST00000376957 CTSGP08311 255 aa16.7■□□□□ 0.26
SRM-201ENST00000376957 C8orf88P0DMB2 117 aa16.7■□□□□ 0.26
SRM-201ENST00000376957 VAMP1P23763 118 aa16.7■□□□□ 0.26
SRM-201ENST00000376957 BMI1P35226 326 aa16.7■□□□□ 0.26
SRM-201ENST00000376957 OPRK1P41145 380 aa16.7■□□□□ 0.26
SRM-201ENST00000376957 BTNL8Q6UX41 500 aa16.7■□□□□ 0.26
SRM-201ENST00000376957 CHRDL1Q9BU40 450 aa16.7■□□□□ 0.26
SRM-201ENST00000376957 RNASE2P10153 161 aaKnown RBP16.69■□□□□ 0.26
SRM-201ENST00000376957 SMCO1Q147U7 214 aa16.69■□□□□ 0.26
SRM-201ENST00000376957 SBSPONQ8IVN8 264 aa16.69■□□□□ 0.26
SRM-201ENST00000376957 CENPSQ8N2Z9 138 aa16.69■□□□□ 0.26
SRM-201ENST00000376957 WWC2-AS2Q96NR7 200 aa16.69■□□□□ 0.26
SRM-201ENST00000376957 GINS3Q9BRX5 216 aa16.69■□□□□ 0.26
SRM-201ENST00000376957 MLXQ9UH92 298 aa16.69■□□□□ 0.26
SRM-201ENST00000376957 ZNF785A8K8V0 405 aa16.68■□□□□ 0.26
SRM-201ENST00000376957 F8W735 103 aaPredicted RBP16.68■□□□□ 0.26
SRM-201ENST00000376957 ADMP35318 185 aa16.68■□□□□ 0.26
SRM-201ENST00000376957 ETFRF1Q6IPR1 90 aa16.68■□□□□ 0.26
SRM-201ENST00000376957 TMEM61Q8N0U2 210 aa16.68■□□□□ 0.26
SRM-201ENST00000376957 OR52B4Q8NGK2 314 aa16.68■□□□□ 0.26
SRM-201ENST00000376957 WDR89Q96FK6 387 aaPredicted RBP16.68■□□□□ 0.26
SRM-201ENST00000376957 C19orf73Q9NVV2 129 aa16.68■□□□□ 0.26
SRM-201ENST00000376957 TRAV30A0A087WSZ9 112 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms