RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 GNG13Q9P2W3 67 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 UBR5O95071 2799 aaPredicted RBP10.35□□□□□ -0.75
TRIM40-206ENST00000376724 CRYBG3Q68DQ2 2970 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 SVEP1Q4LDE5 3571 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 PLXNB1O43157 2135 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 FAM208BQ5VWN6 2430 aa10.35□□□□□ -0.75
TRIM40-206ENST00000376724 MOSP00540 346 aa10.34□□□□□ -0.75
TRIM40-206ENST00000376724 SNRNP70P08621 437 aaKnown RBP10.34□□□□□ -0.75
TRIM40-206ENST00000376724 FBLN7Q53RD9 439 aa10.34□□□□□ -0.75
TRIM40-206ENST00000376724 C15orf54Q8N8G6 183 aa10.34□□□□□ -0.75
TRIM40-206ENST00000376724 MBD3L1Q8WWY6 194 aa10.34□□□□□ -0.75
TRIM40-206ENST00000376724 GGTLC1Q9BX51 225 aa10.34□□□□□ -0.75
TRIM40-206ENST00000376724 ZFP92A6NM28 416 aa10.34□□□□□ -0.75
TRIM40-206ENST00000376724 NDUFS8O00217 210 aa10.34□□□□□ -0.75
TRIM40-206ENST00000376724 BTF3P20290 206 aaKnown RBP10.34□□□□□ -0.75
TRIM40-206ENST00000376724 COMPP49747 757 aaPredicted RBP10.34□□□□□ -0.75
TRIM40-206ENST00000376724 ACOT6Q3I5F7 207 aaPredicted RBP10.34□□□□□ -0.75
TRIM40-206ENST00000376724 EAF1Q96JC9 268 aaPredicted RBP10.34□□□□□ -0.75
TRIM40-206ENST00000376724 P2RX4Q99571 388 aa10.34□□□□□ -0.75
TRIM40-206ENST00000376724 RNF5Q99942 180 aa10.34□□□□□ -0.75
TRIM40-206ENST00000376724 ACTR3CQ9C0K3 210 aaPredicted RBP10.34□□□□□ -0.75
TRIM40-206ENST00000376724 LSM4Q9Y4Z0 139 aaKnown RBP10.34□□□□□ -0.75
TRIM40-206ENST00000376724 DMRT1Q9Y5R6 373 aa10.34□□□□□ -0.75
TRIM40-206ENST00000376724 PXMP4Q9Y6I8 212 aa10.34□□□□□ -0.75
TRIM40-206ENST00000376724 SPG11Q96JI7 2443 aa10.34□□□□□ -0.75
TRIM40-206ENST00000376724 TRAV1-1A0A0B4J248 108 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 VWC2LB2RUY7 222 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 INS-IGF2F8WCM5 200 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 NBR2O15453 112 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 IGHV3-48P01763 117 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 AREGP15514 252 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 OPRK1P41145 380 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 UBE2E1P51965 193 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 CEBPGP53567 150 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 SUB1P53999 127 aaKnown RBP eCLIP10.33□□□□□ -0.76
TRIM40-206ENST00000376724 ATP5IP56385 69 aaPredicted RBP10.33□□□□□ -0.76
TRIM40-206ENST00000376724 GAMTQ14353 236 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 MINOS1Q5TGZ0 78 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 CCDC144NLQ6NUI1 221 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 C19orf35Q6ZS72 473 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 SMCO4Q9NRQ5 59 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 MINOS1-NBL1R4GNA1 71 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 CTXND1A0A1B0GTU2 59 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 IGLC7A0M8Q6 106 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 CYB5BO43169 146 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 CNIH1O95406 144 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 MAS1LP35410 378 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 CD69Q07108 199 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 FABP9Q0Z7S8 132 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 RAB31Q13636 194 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 OR2T6Q8NHC8 308 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 RAB24Q969Q5 203 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 ACY3Q96HD9 319 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 TMPRSS5Q9H3S3 457 aa10.33□□□□□ -0.76
TRIM40-206ENST00000376724 IGHV3OR16-10A0A075B7F0 116 aa10.32□□□□□ -0.76
TRIM40-206ENST00000376724 NCBP2LA6PVI3 153 aaKnown RBP10.32□□□□□ -0.76
TRIM40-206ENST00000376724 YIF1AO95070 293 aa10.32□□□□□ -0.76
TRIM40-206ENST00000376724 SAA4P35542 130 aa10.32□□□□□ -0.76
TRIM40-206ENST00000376724 STPG3Q8N7X2 389 aa10.32□□□□□ -0.76
TRIM40-206ENST00000376724 OR2T10Q8NGZ9 312 aa10.32□□□□□ -0.76
TRIM40-206ENST00000376724 SRSF12Q8WXF0 261 aaKnown RBP10.32□□□□□ -0.76
TRIM40-206ENST00000376724 SLC35B3Q9H1N7 401 aa10.32□□□□□ -0.76
TRIM40-206ENST00000376724 A0A1W2PPV4 95 aa10.31□□□□□ -0.76
TRIM40-206ENST00000376724 GPX4P36969 197 aaPredicted RBP10.31□□□□□ -0.76
TRIM40-206ENST00000376724 CDC34P49427 236 aaPredicted RBP10.31□□□□□ -0.76
TRIM40-206ENST00000376724 SSBP2P81877 361 aaPredicted RBP10.31□□□□□ -0.76
TRIM40-206ENST00000376724 ICAM4Q14773 271 aa10.31□□□□□ -0.76
TRIM40-206ENST00000376724 AKIRIN2Q53H80 203 aa10.31□□□□□ -0.76
TRIM40-206ENST00000376724 TMEM144Q7Z5S9 345 aa10.31□□□□□ -0.76
TRIM40-206ENST00000376724 MRPL41Q8IXM3 137 aaKnown RBP10.31□□□□□ -0.76
TRIM40-206ENST00000376724 MISP3Q96FF7 219 aa10.31□□□□□ -0.76
TRIM40-206ENST00000376724 LRRK2Q5S007 2527 aa10.31□□□□□ -0.76
TRIM40-206ENST00000376724 IGKV1OR2-108A0A075B7D4 117 aa10.31□□□□□ -0.76
TRIM40-206ENST00000376724 OOSP1A8MZH6 123 aa10.31□□□□□ -0.76
TRIM40-206ENST00000376724 FNDC10F2Z333 226 aa10.31□□□□□ -0.76
TRIM40-206ENST00000376724 ZNF506Q5JVG8 444 aa10.31□□□□□ -0.76
TRIM40-206ENST00000376724 ABHD5Q8WTS1 349 aa10.31□□□□□ -0.76
TRIM40-206ENST00000376724 HIST1H2BAQ96A08 127 aa10.31□□□□□ -0.76
TRIM40-206ENST00000376724 SLC35E1Q96K37 410 aa10.31□□□□□ -0.76
TRIM40-206ENST00000376724 FNDC4Q9H6D8 234 aaPredicted RBP10.31□□□□□ -0.76
TRIM40-206ENST00000376724 POLR3KQ9Y2Y1 108 aaPredicted RBP10.31□□□□□ -0.76
TRIM40-206ENST00000376724 TBL2Q9Y4P3 447 aaKnown RBP10.31□□□□□ -0.76
TRIM40-206ENST00000376724 NAV3Q8IVL0 2385 aa10.3□□□□□ -0.76
TRIM40-206ENST00000376724 IGHV3-21A0A0B4J1V1 117 aa10.3□□□□□ -0.76
TRIM40-206ENST00000376724 CENPVL3A0A0U1RRI6 287 aa10.3□□□□□ -0.76
TRIM40-206ENST00000376724 LOC102723971A0A1B0GUV8 181 aa10.3□□□□□ -0.76
TRIM40-206ENST00000376724 TEX22C9J3V5 150 aa10.3□□□□□ -0.76
TRIM40-206ENST00000376724 CLN5O75503 358 aa10.3□□□□□ -0.76
TRIM40-206ENST00000376724 GATA2P23769 480 aaPredicted RBP10.3□□□□□ -0.76
TRIM40-206ENST00000376724 OR10J1P30954 320 aa10.3□□□□□ -0.76
TRIM40-206ENST00000376724 ZNF124Q15973 351 aa10.3□□□□□ -0.76
TRIM40-206ENST00000376724 FAM120AOSQ5T036 256 aa10.3□□□□□ -0.76
TRIM40-206ENST00000376724 NPBQ8NG41 125 aa10.3□□□□□ -0.76
TRIM40-206ENST00000376724 RNASEH2CQ8TDP1 164 aaKnown RBP10.3□□□□□ -0.76
TRIM40-206ENST00000376724 MALSU1Q96EH3 234 aa10.3□□□□□ -0.76
TRIM40-206ENST00000376724 FAM103A1Q9BTL3 118 aaKnown RBP10.3□□□□□ -0.76
TRIM40-206ENST00000376724 KCNIP2Q9NS61 270 aa10.3□□□□□ -0.76
TRIM40-206ENST00000376724 CSMD2Q7Z408 3487 aa10.3□□□□□ -0.76
TRIM40-206ENST00000376724 NPFFO15130 113 aa10.29□□□□□ -0.76
TRIM40-206ENST00000376724 NDUFA3O95167 84 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms