RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 OR8B2Q96RD0 313 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 HIST1H2BNQ99877 126 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 HIST1H2BMQ99879 126 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 CLEC7AQ9BXN2 247 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 TPSG1Q9NRR2 321 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 DOK5Q9P104 306 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 PKD1L2Q7Z442 2459 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 NAV3Q8IVL0 2385 aa16.32■□□□□ 0.2
VSX1-202ENST00000376709 FOXH1O75593 365 aa16.32■□□□□ 0.2
VSX1-202ENST00000376709 LY6HO94772 140 aa16.32■□□□□ 0.2
VSX1-202ENST00000376709 IGLV1-47P01700 117 aa16.32■□□□□ 0.2
VSX1-202ENST00000376709 S100PP25815 95 aa16.32■□□□□ 0.2
VSX1-202ENST00000376709 SUB1P53999 127 aaKnown RBP eCLIP16.32■□□□□ 0.2
VSX1-202ENST00000376709 MIR17HGQ75NE6 70 aa16.32■□□□□ 0.2
VSX1-202ENST00000376709 ACY3Q96HD9 319 aa16.32■□□□□ 0.2
VSX1-202ENST00000376709 FUT9Q9Y231 359 aa16.32■□□□□ 0.2
VSX1-202ENST00000376709 CGB1A6NKQ9 187 aa16.31■□□□□ 0.2
VSX1-202ENST00000376709 GPX4P36969 197 aaPredicted RBP16.31■□□□□ 0.2
VSX1-202ENST00000376709 GALR1P47211 349 aa16.31■□□□□ 0.2
VSX1-202ENST00000376709 ANAPC16Q96DE5 110 aa16.31■□□□□ 0.2
VSX1-202ENST00000376709 YTHDF2Q9Y5A9 579 aaKnown RBP16.31■□□□□ 0.2
VSX1-202ENST00000376709 INSIG2Q9Y5U4 225 aa16.31■□□□□ 0.2
VSX1-202ENST00000376709 S100A9P06702 114 aaKnown RBP16.31■□□□□ 0.2
VSX1-202ENST00000376709 COX7A1P24310 79 aa16.31■□□□□ 0.2
VSX1-202ENST00000376709 OR2T6Q8NHC8 308 aa16.31■□□□□ 0.2
VSX1-202ENST00000376709 BUB1B-PAK6H3BSN5 160 aa16.3■□□□□ 0.2
VSX1-202ENST00000376709 LINC01551Q86U37 167 aa16.3■□□□□ 0.2
VSX1-202ENST00000376709 TCEAL7Q9BRU2 100 aa16.3■□□□□ 0.2
VSX1-202ENST00000376709 CBLN4Q9NTU7 201 aa16.3■□□□□ 0.2
VSX1-202ENST00000376709 MIOXQ9UGB7 285 aa16.3■□□□□ 0.2
VSX1-202ENST00000376709 SCO2A0A1W2PP80 73 aa16.3■□□□□ 0.2
VSX1-202ENST00000376709 TGOLN2O43493 480 aa16.3■□□□□ 0.2
VSX1-202ENST00000376709 RBP4P02753 201 aa16.3■□□□□ 0.2
VSX1-202ENST00000376709 RNASEH2CQ8TDP1 164 aaKnown RBP16.3■□□□□ 0.2
VSX1-202ENST00000376709 ELOVL1Q9BW60 279 aa16.3■□□□□ 0.2
VSX1-202ENST00000376709 AURKAIP1Q9NWT8 199 aaPredicted RBP16.3■□□□□ 0.2
VSX1-202ENST00000376709 ONECUT1Q9UBC0 465 aa16.3■□□□□ 0.2
VSX1-202ENST00000376709 IGHV1-3A0A0C4DH29 117 aa16.29■□□□□ 0.2
VSX1-202ENST00000376709 PFN1P07737 140 aaKnown RBP16.29■□□□□ 0.2
VSX1-202ENST00000376709 HOXA5P20719 270 aa16.29■□□□□ 0.2
VSX1-202ENST00000376709 PSG5Q15238 335 aa16.29■□□□□ 0.2
VSX1-202ENST00000376709 BEND2Q8NDZ0 799 aa16.29■□□□□ 0.2
VSX1-202ENST00000376709 FRZBQ92765 325 aa16.29■□□□□ 0.2
VSX1-202ENST00000376709 TIMD4Q96H15 378 aa16.29■□□□□ 0.2
VSX1-202ENST00000376709 PLXNB1O43157 2135 aa16.29■□□□□ 0.2
VSX1-202ENST00000376709 A0A1W2PPI3 338 aa16.28■□□□□ 0.2
VSX1-202ENST00000376709 TEX45Q8NA69 505 aa16.28■□□□□ 0.2
VSX1-202ENST00000376709 C19orf24Q9BVV8 132 aa16.28■□□□□ 0.2
VSX1-202ENST00000376709 TECRQ9NZ01 308 aaKnown RBP16.28■□□□□ 0.2
VSX1-202ENST00000376709 HIVEP3Q5T1R4 2406 aa16.28■□□□□ 0.2
VSX1-202ENST00000376709 IFITM10A6NMD0 228 aa16.28■□□□□ 0.2
VSX1-202ENST00000376709 REG1AP05451 166 aa16.28■□□□□ 0.2
VSX1-202ENST00000376709 TRGC1P0CF51 173 aa16.28■□□□□ 0.2
VSX1-202ENST00000376709 C4orf17Q53FE4 359 aa16.28■□□□□ 0.2
VSX1-202ENST00000376709 C8orf46Q8TAG6 207 aa16.28■□□□□ 0.2
VSX1-202ENST00000376709 RPEQ96AT9 228 aa16.28■□□□□ 0.2
VSX1-202ENST00000376709 AMMECR1Q9Y4X0 333 aaPredicted RBP16.28■□□□□ 0.2
VSX1-202ENST00000376709 PGPEP1LA6NFU8 196 aa16.27■□□□□ 0.2
VSX1-202ENST00000376709 OR7C2O60412 319 aa16.27■□□□□ 0.2
VSX1-202ENST00000376709 LIPFP07098 398 aa16.27■□□□□ 0.2
VSX1-202ENST00000376709 UQCRFS1P47985 274 aa16.27■□□□□ 0.2
VSX1-202ENST00000376709 TNXAQ16473 311 aa16.27■□□□□ 0.2
VSX1-202ENST00000376709 MMD2Q8IY49 270 aa16.27■□□□□ 0.2
VSX1-202ENST00000376709 TMEM167BQ9NRX6 74 aa16.27■□□□□ 0.2
VSX1-202ENST00000376709 CNTFRP26992 372 aa16.27■□□□□ 0.19
VSX1-202ENST00000376709 TAS2R45P59539 299 aa16.27■□□□□ 0.19
VSX1-202ENST00000376709 CLEC12BQ2HXU8 276 aa16.27■□□□□ 0.19
VSX1-202ENST00000376709 MRGPRG-AS1Q2M3A8 158 aa16.27■□□□□ 0.19
VSX1-202ENST00000376709 MRPL41Q8IXM3 137 aaKnown RBP16.27■□□□□ 0.19
VSX1-202ENST00000376709 UHRF2Q96PU4 802 aa16.27■□□□□ 0.19
VSX1-202ENST00000376709 FNDC4Q9H6D8 234 aaPredicted RBP16.27■□□□□ 0.19
VSX1-202ENST00000376709 A0A1W2PPQ1 181 aa16.26■□□□□ 0.19
VSX1-202ENST00000376709 IGHV3-48P01763 117 aa16.26■□□□□ 0.19
VSX1-202ENST00000376709 SOD3P08294 240 aa16.26■□□□□ 0.19
VSX1-202ENST00000376709 OR5G3P0C626 314 aa16.26■□□□□ 0.19
VSX1-202ENST00000376709 CDX1P47902 265 aaPredicted RBP16.26■□□□□ 0.19
VSX1-202ENST00000376709 PRSS8Q16651 343 aa16.26■□□□□ 0.19
VSX1-202ENST00000376709 PQLC2Q6ZP29 291 aa16.26■□□□□ 0.19
VSX1-202ENST00000376709 PNKDQ8N490 385 aa16.26■□□□□ 0.19
VSX1-202ENST00000376709 TRBV20OR9-2A0A075B6H5 130 aa16.26■□□□□ 0.19
VSX1-202ENST00000376709 PHOX2AO14813 284 aa16.26■□□□□ 0.19
VSX1-202ENST00000376709 NPIPB3Q92617 1050 aa16.26■□□□□ 0.19
VSX1-202ENST00000376709 PPP5D1E7EU14 171 aa16.25■□□□□ 0.19
VSX1-202ENST00000376709 RPL27AP46776 148 aaKnown RBP16.25■□□□□ 0.19
VSX1-202ENST00000376709 ZNF114Q8NC26 417 aa16.25■□□□□ 0.19
VSX1-202ENST00000376709 TMEM37Q8WXS4 190 aa16.25■□□□□ 0.19
VSX1-202ENST00000376709 SPTBN1Q01082 2364 aaKnown RBP16.25■□□□□ 0.19
VSX1-202ENST00000376709 IGLC7A0M8Q6 106 aa16.24■□□□□ 0.19
VSX1-202ENST00000376709 C22orf46C9J442 243 aa16.24■□□□□ 0.19
VSX1-202ENST00000376709 CD99P14209 185 aa16.24■□□□□ 0.19
VSX1-202ENST00000376709 SSBP2P81877 361 aaPredicted RBP16.24■□□□□ 0.19
VSX1-202ENST00000376709 GFI1BQ5VTD9 330 aa16.24■□□□□ 0.19
VSX1-202ENST00000376709 C11orf71Q6IPW1 123 aa16.24■□□□□ 0.19
VSX1-202ENST00000376709 HCP5Q6MZN7 132 aa16.24■□□□□ 0.19
VSX1-202ENST00000376709 KCNIP4Q6PIL6 250 aa16.24■□□□□ 0.19
VSX1-202ENST00000376709 NEU4Q8WWR8 484 aaPredicted RBP16.24■□□□□ 0.19
VSX1-202ENST00000376709 PYGO2Q9BRQ0 406 aa16.24■□□□□ 0.19
VSX1-202ENST00000376709 SRD5A3Q9H8P0 318 aa16.24■□□□□ 0.19
VSX1-202ENST00000376709 NIT2Q9NQR4 276 aa16.24■□□□□ 0.19
VSX1-202ENST00000376709 SIGLEC9Q9Y336 463 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms