RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 CXorf1O96002 111 aa9.16□□□□□ -0.94
HDAC6-203ENST00000376619 MFAP2P55001 183 aa9.16□□□□□ -0.94
HDAC6-203ENST00000376619 TMEM200BQ69YZ2 307 aa9.16□□□□□ -0.94
HDAC6-203ENST00000376619 LINC00518Q8N0U6 118 aa9.16□□□□□ -0.94
HDAC6-203ENST00000376619 LINC00479Q96M42 142 aa9.16□□□□□ -0.94
HDAC6-203ENST00000376619 SEBOXQ9HB31 216 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-203ENST00000376619 ZFHX4Q86UP3 3567 aa9.16□□□□□ -0.94
HDAC6-203ENST00000376619 ZNF253O75346 499 aa9.16□□□□□ -0.94
HDAC6-203ENST00000376619 RPL29P47914 159 aaKnown RBP9.16□□□□□ -0.94
HDAC6-203ENST00000376619 IL15RAQ13261 267 aa9.16□□□□□ -0.94
HDAC6-203ENST00000376619 SPSB3Q6PJ21 355 aa9.16□□□□□ -0.94
HDAC6-203ENST00000376619 HAPLN4Q86UW8 402 aa9.16□□□□□ -0.94
HDAC6-203ENST00000376619 PDPNQ86YL7 162 aa9.16□□□□□ -0.94
HDAC6-203ENST00000376619 OR4C13Q8NGP0 309 aa9.16□□□□□ -0.94
HDAC6-203ENST00000376619 RNASE7Q9H1E1 156 aaKnown RBP9.16□□□□□ -0.94
HDAC6-203ENST00000376619 GNG5P63218 68 aa9.16□□□□□ -0.94
HDAC6-203ENST00000376619 RASL11BQ9BPW5 248 aa9.16□□□□□ -0.94
HDAC6-203ENST00000376619 PAXXQ9BUH6 204 aa9.16□□□□□ -0.94
HDAC6-203ENST00000376619 MBD3L4A6NDZ8 208 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-203ENST00000376619 MBD3L3A6NE82 208 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-203ENST00000376619 MBD3L5A6NJ08 208 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-203ENST00000376619 ZNF785A8K8V0 405 aa9.15□□□□□ -0.94
HDAC6-203ENST00000376619 AMTP48728 403 aa9.15□□□□□ -0.94
HDAC6-203ENST00000376619 RNASEKQ6P5S7 137 aaKnown RBP9.15□□□□□ -0.94
HDAC6-203ENST00000376619 TREML4Q6UXN2 200 aa9.15□□□□□ -0.94
HDAC6-203ENST00000376619 C1QL4Q86Z23 238 aa9.15□□□□□ -0.94
HDAC6-203ENST00000376619 MBD3L2Q8NHZ7 208 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-203ENST00000376619 VSTM2AQ8TAG5 236 aa9.15□□□□□ -0.94
HDAC6-203ENST00000376619 FKBP11Q9NYL4 201 aa9.15□□□□□ -0.94
HDAC6-203ENST00000376619 HSPB7Q9UBY9 170 aa9.15□□□□□ -0.94
HDAC6-203ENST00000376619 ANAPC10Q9UM13 185 aa9.15□□□□□ -0.94
HDAC6-203ENST00000376619 WASHC3Q9Y3C0 194 aa9.15□□□□□ -0.94
HDAC6-203ENST00000376619 ZNF729A6NN14 1252 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-203ENST00000376619 APOBEC3AP31941 199 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-203ENST00000376619 SRSF4Q08170 494 aaKnown RBP9.15□□□□□ -0.94
HDAC6-203ENST00000376619 ZNF506Q5JVG8 444 aa9.15□□□□□ -0.94
HDAC6-203ENST00000376619 PRNTQ86SH4 94 aa9.15□□□□□ -0.94
HDAC6-203ENST00000376619 NCKAP5O14513 1909 aa9.15□□□□□ -0.95
HDAC6-203ENST00000376619 A0A1B0GUS0 222 aa9.15□□□□□ -0.95
HDAC6-203ENST00000376619 CHEK1O14757 476 aa9.15□□□□□ -0.95
HDAC6-203ENST00000376619 S100A8P05109 93 aa9.15□□□□□ -0.95
HDAC6-203ENST00000376619 AGAP20933 346 aa9.15□□□□□ -0.95
HDAC6-203ENST00000376619 CNTFRP26992 372 aa9.15□□□□□ -0.95
HDAC6-203ENST00000376619 FCGR2BP31994 310 aaPredicted RBP9.15□□□□□ -0.95
HDAC6-203ENST00000376619 ERVK11-1P61568 191 aa9.15□□□□□ -0.95
HDAC6-203ENST00000376619 PNRC1Q12796 327 aaPredicted RBP9.15□□□□□ -0.95
HDAC6-203ENST00000376619 MANBALQ9NQG1 85 aa9.15□□□□□ -0.95
HDAC6-203ENST00000376619 HSBP1O75506 76 aa9.14□□□□□ -0.95
HDAC6-203ENST00000376619 CRISP2P16562 243 aa9.14□□□□□ -0.95
HDAC6-203ENST00000376619 GCHFRP30047 84 aa9.14□□□□□ -0.95
HDAC6-203ENST00000376619 ATOH7Q8N100 152 aa9.14□□□□□ -0.95
HDAC6-203ENST00000376619 MBNL3Q9NUK0 354 aaKnown RBP9.14□□□□□ -0.95
HDAC6-203ENST00000376619 PAM16Q9Y3D7 125 aa9.14□□□□□ -0.95
HDAC6-203ENST00000376619 J3QW42 95 aa9.14□□□□□ -0.95
HDAC6-203ENST00000376619 FOXA3P55318 350 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-203ENST00000376619 SIGLECL1Q8N7X8 197 aa9.14□□□□□ -0.95
HDAC6-203ENST00000376619 OR1L6Q8NGR2 347 aa9.14□□□□□ -0.95
HDAC6-203ENST00000376619 TMEM18Q96B42 140 aa9.14□□□□□ -0.95
HDAC6-203ENST00000376619 NAGKQ9UJ70 344 aa9.14□□□□□ -0.95
HDAC6-203ENST00000376619 E7EQL1 145 aa9.14□□□□□ -0.95
HDAC6-203ENST00000376619 GATCO43716 136 aaKnown RBP9.14□□□□□ -0.95
HDAC6-203ENST00000376619 HTN1P15515 57 aa9.14□□□□□ -0.95
HDAC6-203ENST00000376619 KIR2DS2P43631 304 aa9.14□□□□□ -0.95
HDAC6-203ENST00000376619 RPL23P62829 140 aaKnown RBP9.14□□□□□ -0.95
HDAC6-203ENST00000376619 WFDC3Q8IUB2 231 aa9.14□□□□□ -0.95
HDAC6-203ENST00000376619 C15orf62A8K5M9 175 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 FAM90A26D6RGX4 464 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 YPEL1O60688 119 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 DPPA3Q6W0C5 159 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 BORCS7Q96B45 105 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 YPEL2Q96QA6 119 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 SLC25A33Q9BSK2 321 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 IFI27L2Q9H2X8 130 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 CT45A10P0DMU9 189 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 ZNF726P1Q15940 193 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 LINC00305Q7Z4B0 112 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 ZNF430Q9H8G1 570 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-203ENST00000376619 CHODLQ9H9P2 273 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 COL4A2P08572 1712 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 CXorf65A6NEN9 183 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 PRB1P04280 392 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 HTR1DP28221 377 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 TIMP3P35625 211 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 CENPWQ5EE01 88 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 GAFA1Q96PS6 74 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 TXN2Q99757 166 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 SPOCK3Q9BQ16 436 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 DNAJC4Q9NNZ3 241 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 TPSG1Q9NRR2 321 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 COL8A1P27658 744 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 VN1R17PQ8TDU5 208 aa9.13□□□□□ -0.95
HDAC6-203ENST00000376619 RPUSD1Q9UJJ7 312 aaKnown RBP9.13□□□□□ -0.95
HDAC6-203ENST00000376619 SRRM4A7MD48 611 aaKnown RBP9.12□□□□□ -0.95
HDAC6-203ENST00000376619 ACAA1P09110 424 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-203ENST00000376619 G0S2P27469 103 aa9.12□□□□□ -0.95
HDAC6-203ENST00000376619 ELOBQ15370 118 aa9.12□□□□□ -0.95
HDAC6-203ENST00000376619 MAPK1IP1LQ8NDC0 245 aa9.12□□□□□ -0.95
HDAC6-203ENST00000376619 SDF2L1Q9HCN8 221 aa9.12□□□□□ -0.95
HDAC6-203ENST00000376619 FOXA2Q9Y261 457 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-203ENST00000376619 OR2J3O76001 311 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 301.6 ms