RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 CGB3P0DN86 165 aa17.26■□□□□ 0.35
UPF3A-202ENST00000375299 CGB7P0DN87 165 aa17.26■□□□□ 0.35
UPF3A-202ENST00000375299 TSPOP30536 169 aa17.26■□□□□ 0.35
UPF3A-202ENST00000375299 PCP4P48539 62 aa17.26■□□□□ 0.35
UPF3A-202ENST00000375299 DEFB123Q8N688 67 aa17.26■□□□□ 0.35
UPF3A-202ENST00000375299 NHLRC2Q8NBF2 726 aa17.26■□□□□ 0.35
UPF3A-202ENST00000375299 ADTRPQ96IZ2 230 aa17.26■□□□□ 0.35
UPF3A-202ENST00000375299 SLC25A33Q9BSK2 321 aa17.26■□□□□ 0.35
UPF3A-202ENST00000375299 ZNF257Q9Y2Q1 563 aa17.26■□□□□ 0.35
UPF3A-202ENST00000375299 MRPS16Q9Y3D3 137 aaKnown RBP17.26■□□□□ 0.35
UPF3A-202ENST00000375299 SP9P0CG40 484 aa17.26■□□□□ 0.35
UPF3A-202ENST00000375299 GUSBP1Q15486 140 aa17.26■□□□□ 0.35
UPF3A-202ENST00000375299 ATP1A1-AS1Q5TC04 95 aa17.26■□□□□ 0.35
UPF3A-202ENST00000375299 DHRS13Q6UX07 377 aa17.26■□□□□ 0.35
UPF3A-202ENST00000375299 C1orf162Q8NEQ5 155 aaPredicted RBP17.26■□□□□ 0.35
UPF3A-202ENST00000375299 FAM168AQ92567 244 aa17.26■□□□□ 0.35
UPF3A-202ENST00000375299 KNTC1P50748 2209 aa17.25■□□□□ 0.35
UPF3A-202ENST00000375299 MAJINQ3KP22 176 aa17.25■□□□□ 0.35
UPF3A-202ENST00000375299 LYG1Q8N1E2 194 aa17.25■□□□□ 0.35
UPF3A-202ENST00000375299 SSBP3Q9BWW4 388 aaPredicted RBP17.25■□□□□ 0.35
UPF3A-202ENST00000375299 ASCL3Q9NQ33 180 aa17.25■□□□□ 0.35
UPF3A-202ENST00000375299 IGHV2OR16-5A0A0B4J2B6 119 aa17.25■□□□□ 0.35
UPF3A-202ENST00000375299 TNXAQ16473 311 aa17.25■□□□□ 0.35
UPF3A-202ENST00000375299 LCN12Q6JVE5 192 aa17.25■□□□□ 0.35
UPF3A-202ENST00000375299 SPACA3Q8IXA5 215 aa17.25■□□□□ 0.35
UPF3A-202ENST00000375299 MRPL32Q9BYC8 188 aaKnown RBP17.25■□□□□ 0.35
UPF3A-202ENST00000375299 UPK2O00526 184 aa17.24■□□□□ 0.35
UPF3A-202ENST00000375299 C2orf83Q53S99 150 aa17.24■□□□□ 0.35
UPF3A-202ENST00000375299 PLA2G2CQ5R387 149 aa17.24■□□□□ 0.35
UPF3A-202ENST00000375299 MBD6Q96DN6 1003 aa17.24■□□□□ 0.35
UPF3A-202ENST00000375299 RAB9BQ9NP90 201 aa17.24■□□□□ 0.35
UPF3A-202ENST00000375299 HSBP1O75506 76 aa17.24■□□□□ 0.35
UPF3A-202ENST00000375299 IGLV1-44P01699 117 aa17.24■□□□□ 0.35
UPF3A-202ENST00000375299 HINT1P49773 126 aaPredicted RBP17.24■□□□□ 0.35
UPF3A-202ENST00000375299 PTTG1IPP53801 180 aa17.24■□□□□ 0.35
UPF3A-202ENST00000375299 VWA1Q6PCB0 445 aa17.24■□□□□ 0.35
UPF3A-202ENST00000375299 FAM231DQ6ZW35 169 aa17.24■□□□□ 0.35
UPF3A-202ENST00000375299 TMEM178AQ8NBL3 297 aa17.24■□□□□ 0.35
UPF3A-202ENST00000375299 OR5B3Q8NH48 314 aa17.24■□□□□ 0.35
UPF3A-202ENST00000375299 OR9G1Q8NH87 305 aa17.24■□□□□ 0.35
UPF3A-202ENST00000375299 PRR14LQ5THK1 2151 aa17.24■□□□□ 0.35
UPF3A-202ENST00000375299 IGHV2-26A0A0B4J1V2 119 aa17.23■□□□□ 0.35
UPF3A-202ENST00000375299 IGHV1-18A0A0C4DH31 117 aa17.23■□□□□ 0.35
UPF3A-202ENST00000375299 CCL25O15444 150 aa17.23■□□□□ 0.35
UPF3A-202ENST00000375299 CFHR2P36980 270 aa17.23■□□□□ 0.35
UPF3A-202ENST00000375299 UBE2L3P68036 154 aaKnown RBP17.23■□□□□ 0.35
UPF3A-202ENST00000375299 SLC25A2Q9BXI2 301 aa17.23■□□□□ 0.35
UPF3A-202ENST00000375299 FAM181BA6NEQ2 426 aa17.23■□□□□ 0.35
UPF3A-202ENST00000375299 ATP5IP56385 69 aaPredicted RBP17.23■□□□□ 0.35
UPF3A-202ENST00000375299 KLF5Q13887 457 aaPredicted RBP17.23■□□□□ 0.35
UPF3A-202ENST00000375299 FAM167A-AS1Q96KT0 104 aa17.23■□□□□ 0.35
UPF3A-202ENST00000375299 BET1LQ9NYM9 111 aa17.23■□□□□ 0.35
UPF3A-202ENST00000375299 DSCAML1Q8TD84 2053 aa17.23■□□□□ 0.35
UPF3A-202ENST00000375299 KBTBD11-OT1A0A1B0GTJ5 212 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 KIR2DL2P43627 348 aaPredicted RBP17.22■□□□□ 0.35
UPF3A-202ENST00000375299 MFAP2P55001 183 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 MLANAQ16655 118 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 HES3Q5TGS1 186 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 ASPHD1Q5U4P2 390 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 GRAMD2BQ96HH9 432 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 LINC00479Q96M42 142 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 NCOR1P1Q9H4R4 102 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 NCOR1O75376 2440 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 TRAV9-2A0A087WT02 112 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 TEX50A0A1B0GTY4 177 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 M0R2Z0 102 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 GDF5OSQ5U4N7 250 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 OR1L8Q8NGR8 309 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 OR2V2Q96R30 315 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 SAP30LQ9HAJ7 183 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 ZNF355PQ9NSJ1 428 aa17.22■□□□□ 0.35
UPF3A-202ENST00000375299 TANC2Q9HCD6 1990 aa17.21■□□□□ 0.35
UPF3A-202ENST00000375299 TRAV5A0A0B4J249 113 aa17.21■□□□□ 0.35
UPF3A-202ENST00000375299 PSMB11A5LHX3 300 aa17.21■□□□□ 0.35
UPF3A-202ENST00000375299 TOMM40O96008 361 aa17.21■□□□□ 0.35
UPF3A-202ENST00000375299 RNASE2P10153 161 aaKnown RBP17.21■□□□□ 0.35
UPF3A-202ENST00000375299 CD69Q07108 199 aa17.21■□□□□ 0.35
UPF3A-202ENST00000375299 TBR1Q16650 682 aa17.21■□□□□ 0.35
UPF3A-202ENST00000375299 MORN5Q5VZ52 161 aa17.21■□□□□ 0.35
UPF3A-202ENST00000375299 EBLN2Q6P2I7 272 aa17.21■□□□□ 0.35
UPF3A-202ENST00000375299 NUP35Q8NFH5 326 aa17.21■□□□□ 0.35
UPF3A-202ENST00000375299 OR8B3Q8NGG8 313 aa17.21■□□□□ 0.35
UPF3A-202ENST00000375299 OR8B2Q96RD0 313 aa17.21■□□□□ 0.35
UPF3A-202ENST00000375299 COX11Q9Y6N1 276 aa17.21■□□□□ 0.35
UPF3A-202ENST00000375299 KLF3P57682 345 aaPredicted RBP17.21■□□□□ 0.34
UPF3A-202ENST00000375299 SPRNQ5BIV9 151 aa17.21■□□□□ 0.34
UPF3A-202ENST00000375299 UNQ5815/PRO19632Q6UWF5 114 aa17.21■□□□□ 0.34
UPF3A-202ENST00000375299 MOGAT3Q86VF5 341 aa17.21■□□□□ 0.34
UPF3A-202ENST00000375299 LEMD1Q68G75 181 aa17.2■□□□□ 0.34
UPF3A-202ENST00000375299 TNFRSF19Q9NS68 423 aa17.2■□□□□ 0.34
UPF3A-202ENST00000375299 AMMECR1Q9Y4X0 333 aaPredicted RBP17.2■□□□□ 0.34
UPF3A-202ENST00000375299 GNG10P50151 68 aa17.2■□□□□ 0.34
UPF3A-202ENST00000375299 UBE2G1P62253 170 aa17.2■□□□□ 0.34
UPF3A-202ENST00000375299 MSMPQ1L6U9 139 aa17.2■□□□□ 0.34
UPF3A-202ENST00000375299 Q56UQ5 140 aa17.2■□□□□ 0.34
UPF3A-202ENST00000375299 NUDT10Q8NFP7 164 aa17.2■□□□□ 0.34
UPF3A-202ENST00000375299 SNRNP40Q96DI7 357 aaKnown RBP17.2■□□□□ 0.34
UPF3A-202ENST00000375299 NUDT11Q96G61 164 aa17.2■□□□□ 0.34
UPF3A-202ENST00000375299 LOXL4Q96JB6 756 aa17.2■□□□□ 0.34
UPF3A-202ENST00000375299 HEATR1Q9H583 2144 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms