RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 RBMXP38159 391 aaKnown RBP7.31□□□□□ -1.24
UBR4-201ENST00000375218 KCTD18Q6PI47 426 aaPredicted RBP7.31□□□□□ -1.24
UBR4-201ENST00000375218 CIARTQ8N365 385 aaPredicted RBP7.31□□□□□ -1.24
UBR4-201ENST00000375218 OR2A1Q8NGT9 310 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 DCTN5Q9BTE1 182 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 INAFM2P0DMQ5 153 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 NFYAP23511 347 aaPredicted RBP7.31□□□□□ -1.24
UBR4-201ENST00000375218 GAGE2BQ13066 116 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 GAGE2EQ4V326 116 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 SLC22A24Q8N4F4 322 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 SLIRPQ9GZT3 109 aaKnown RBP7.31□□□□□ -1.24
UBR4-201ENST00000375218 GAGE2DQ9UEU5 116 aa7.31□□□□□ -1.24
UBR4-201ENST00000375218 XKRYO14609 159 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 GPANK1O95872 356 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 TGFBR1P36897 503 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 TAS2R46P59540 309 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 LEG1Q6P5S2 330 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 NT5CQ8TCD5 201 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 SIGLEC7Q9Y286 467 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 PLAC8L1A1L4L8 177 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 GGTLC3B5MD39 225 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 SOCS2O14508 198 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 LYZL6O75951 148 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 TMEM187Q14656 261 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 CST6Q15828 149 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 C9orf153Q5TBE3 101 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 SPATA3Q8NHX4 192 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 WDR61Q9GZS3 305 aaKnown RBP7.3□□□□□ -1.24
UBR4-201ENST00000375218 MPDZO75970 2070 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 TRAV5A0A0B4J249 113 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 GRIFINA4D1Z8 144 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 DPM2O94777 84 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 ATP5G1P05496 136 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 INPP1P49441 399 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 HBG1P69891 147 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 HBG2P69892 147 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 KCNRGQ8N5I3 272 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 PLEKHB2Q96CS7 222 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 POLR2IP36954 125 aaKnown RBP7.3□□□□□ -1.24
UBR4-201ENST00000375218 ENDOGQ14249 297 aaKnown RBP7.3□□□□□ -1.24
UBR4-201ENST00000375218 CLECL1Q8IZS7 167 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 STAG3L4Q8TBR4 150 aa7.3□□□□□ -1.24
UBR4-201ENST00000375218 YTHDF2Q9Y5A9 579 aaKnown RBP7.3□□□□□ -1.24
UBR4-201ENST00000375218 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.29□□□□□ -1.24
UBR4-201ENST00000375218 CYB5AP00167 134 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 STATHP02808 62 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 ATP1B1P05026 303 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 RPL18AQ02543 176 aaKnown RBP7.29□□□□□ -1.24
UBR4-201ENST00000375218 PAX8Q06710 450 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 CTF1Q16619 201 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 ACP7Q6ZNF0 438 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 RHNO1Q9BSD3 238 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 TM2D2Q9BX73 214 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 J3QT63 122 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 OVOL1O14753 267 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 TRGC1P0CF51 173 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 CRYBB3P26998 211 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 SPANXN4Q5MJ08 99 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 ZNF626Q68DY1 528 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 SHISA6Q6ZSJ9 500 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 ZNF550Q7Z398 422 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 ZNF835Q9Y2P0 537 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 UBL3O95164 117 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 Q5XG85 94 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 VN1R4Q7Z5H5 301 aa7.29□□□□□ -1.24
UBR4-201ENST00000375218 MCTS1Q9ULC4 181 aaKnown RBP7.29□□□□□ -1.24
UBR4-201ENST00000375218 NOP16Q9Y3C1 178 aaKnown RBP7.29□□□□□ -1.24
UBR4-201ENST00000375218 C7orf77A4D0Y5 90 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 TACSTD2P09758 323 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 FABP5Q01469 135 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 SLC25A30Q5SVS4 291 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 C10orf91Q5T1B1 145 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 LINC00596Q86U02 117 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 OR4C3Q8NH37 302 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 SDF2Q99470 211 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 CHST6Q9GZX3 395 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 TRAV8-4A0A0B4J246 113 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 GEMIN2O14893 280 aaKnown RBP7.28□□□□□ -1.24
UBR4-201ENST00000375218 GABARAPO95166 117 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 CLPSP04118 112 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 SCTP09683 121 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 CD59P13987 128 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 Q6ZUT4 128 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 RNF7Q9UBF6 113 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 TTC28Q96AY4 2481 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 FFAR1O14842 300 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 HLA-DRB1P01911 266 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 TPT1P13693 172 aaKnown RBP7.28□□□□□ -1.24
UBR4-201ENST00000375218 MTPNP58546 118 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 DIAPH2-AS1Q14236 149 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 PLK5Q496M5 336 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 SLC25A34Q6PIV7 304 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 DNM1P46Q6ZS02 220 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 BANF2Q9H503 90 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 TAAR2Q9P1P5 351 aa7.28□□□□□ -1.24
UBR4-201ENST00000375218 F11RQ9Y624 299 aaKnown RBP7.28□□□□□ -1.24
UBR4-201ENST00000375218 M0R1X1 148 aa7.27□□□□□ -1.25
UBR4-201ENST00000375218 TAX1BP3O14907 124 aa7.27□□□□□ -1.25
UBR4-201ENST00000375218 LMX1BO60663 402 aa7.27□□□□□ -1.25
UBR4-201ENST00000375218 OR2A4O95047 310 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms