RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 FAM90A10PA6NDY2 464 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 FAM90A18PA6NE21 464 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 FAM90A16PA6NEW6 464 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 FAM90A20PA6NIJ5 464 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 FAM90A8PA6NJQ4 464 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 FAM90A7PA6NKC0 464 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 FAM90A22PA8MWA6 464 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 FAM90A12PA8MX19 464 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 FAM90A5PA8MXJ8 464 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 FAM90A23PA8MXZ1 464 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 FAM90A15PP0C7V4 464 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 FAM90A13PP0C7W8 464 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 FAM90A14PP0C7W9 464 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 FAM90A24PP0C7X0 464 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 GATAD1Q8WUU5 269 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 LOC390937A0A1W2PQ73 354 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 PET117Q6UWS5 81 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 CEP290O15078 2479 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 KBTBD11-OT1A0A1B0GTJ5 212 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 PYYP10082 97 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 DEPPQ9NTK1 212 aa12.33□□□□□ -0.44
NOTCH4-201ENST00000375023 OR11H12B2RN74 326 aa12.32□□□□□ -0.44
NOTCH4-201ENST00000375023 OR11H1Q8NG94 326 aa12.32□□□□□ -0.44
NOTCH4-201ENST00000375023 OR11H2Q8NH07 326 aa12.32□□□□□ -0.44
NOTCH4-201ENST00000375023 FER1L5A0AVI2 2057 aa12.32□□□□□ -0.44
NOTCH4-201ENST00000375023 SDF2L1Q9HCN8 221 aa12.32□□□□□ -0.44
NOTCH4-201ENST00000375023 VENTXO95231 258 aa12.32□□□□□ -0.44
NOTCH4-201ENST00000375023 LCNL1Q6ZST4 164 aa12.32□□□□□ -0.44
NOTCH4-201ENST00000375023 KLHL30-AS1Q8NEE0 82 aa12.32□□□□□ -0.44
NOTCH4-201ENST00000375023 RNASE6Q93091 150 aaKnown RBP12.32□□□□□ -0.44
NOTCH4-201ENST00000375023 DPRXA6NFQ7 191 aa12.32□□□□□ -0.44
NOTCH4-201ENST00000375023 RAB9AP51151 201 aa12.32□□□□□ -0.44
NOTCH4-201ENST00000375023 UBE2E2Q96LR5 201 aa12.32□□□□□ -0.44
NOTCH4-201ENST00000375023 SPRR3Q9UBC9 169 aa12.32□□□□□ -0.44
NOTCH4-201ENST00000375023 FAM90A26D6RGX4 464 aa12.32□□□□□ -0.44
NOTCH4-201ENST00000375023 DDTP30046 118 aa12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 NPDC1Q9NQX5 325 aaPredicted RBP12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 SRSF4Q08170 494 aaKnown RBP12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 TMEM42Q69YG0 159 aa12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 ASCL2Q99929 193 aa12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 C17orf100A8MU93 164 aa12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 FOXF2Q12947 444 aa12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 OR10J3Q5JRS4 329 aa12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 C10orf126Q8N4M7 172 aa12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 PGPEP1LA6NFU8 196 aa12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 LINC00614P0C842 121 aa12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 COX5BP10606 129 aa12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 FAM169BQ8N8A8 192 aa12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 FER1L6-AS1Q8NA97 138 aa12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 OR10W1Q8NGF6 305 aa12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 HIST1H2BAQ96A08 127 aa12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 CNTFRP26992 372 aa12.31□□□□□ -0.44
NOTCH4-201ENST00000375023 THBDP07204 575 aa12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 HOXB1P14653 301 aaPredicted RBP12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 NEU4Q8WWR8 484 aaPredicted RBP12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 RTBDNQ9BSG5 229 aaPredicted RBP12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 MRPS16Q9Y3D3 137 aaKnown RBP12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 TMEM50AO95807 157 aa12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 SAPCD1Q5SSQ6 148 aa12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 EREGO14944 169 aa12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 LY6HO94772 140 aa12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 GZMBP10144 247 aa12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 STRCP1A6NGW2 1772 aa12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 HIGD1CA8MV81 97 aa12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 NXT2Q9NPJ8 142 aaKnown RBP12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 FOXD3Q9UJU5 478 aaPredicted RBP12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 ZNF600Q6ZNG1 722 aa12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 GTF3AQ92664 365 aaKnown RBP12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 GGACTQ9BVM4 153 aa12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 HOXA5P20719 270 aa12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 ANXA2RQ3ZCQ2 193 aa12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 FAM89BQ8N5H3 189 aa12.3□□□□□ -0.44
NOTCH4-201ENST00000375023 IGKV1D-13A0A0B4J2D9 117 aa12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 A0A0G2JLM5 398 aa12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 CA1P00915 261 aaPredicted RBP12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 IGKV1-13P0DP09 117 aa12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 FGFBP3Q8TAT2 258 aa12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 AICDAQ9GZX7 198 aa12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 PLXNA1Q9UIW2 1896 aa12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 CFHR3Q02985 330 aa12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 ZNF688P0C7X2 276 aa12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 RHOGP84095 191 aa12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 ZIC4Q8N9L1 334 aa12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 TMEM167AQ8TBQ9 72 aa12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 RPP21Q9H633 154 aaKnown RBP12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 LSM4Q9Y4Z0 139 aaKnown RBP12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 SELLP14151 372 aa12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 C5orf24Q7Z6I8 188 aa12.29□□□□□ -0.44
NOTCH4-201ENST00000375023 TBX6O95947 436 aaPredicted RBP12.28□□□□□ -0.44
NOTCH4-201ENST00000375023 ZNF329Q86UD4 541 aa12.28□□□□□ -0.44
NOTCH4-201ENST00000375023 LRTM2Q8N967 370 aa12.28□□□□□ -0.44
NOTCH4-201ENST00000375023 SPAG8Q99932 426 aaPredicted RBP12.28□□□□□ -0.44
NOTCH4-201ENST00000375023 LYZL4Q96KX0 146 aa12.28□□□□□ -0.44
NOTCH4-201ENST00000375023 IL36BQ9NZH7 164 aa12.28□□□□□ -0.44
NOTCH4-201ENST00000375023 TRAV5A0A0B4J249 113 aa12.28□□□□□ -0.44
NOTCH4-201ENST00000375023 IFITM2Q01629 132 aa12.28□□□□□ -0.44
NOTCH4-201ENST00000375023 ZMAT4Q9H898 229 aa12.28□□□□□ -0.44
NOTCH4-201ENST00000375023 TP53BP1Q12888 1972 aaPredicted RBP12.28□□□□□ -0.44
NOTCH4-201ENST00000375023 TRAV2A0A0B4J234 112 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms