RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 TEX261Q6UWH6 196 aa8.62□□□□□ -1.03
HLA-DQA1-202ENST00000374949 OR2T6Q8NHC8 308 aa8.62□□□□□ -1.03
HLA-DQA1-202ENST00000374949 RASL11BQ9BPW5 248 aa8.62□□□□□ -1.03
HLA-DQA1-202ENST00000374949 CGB1A6NKQ9 187 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 C15orf62A8K5M9 175 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 E7EUB6 86 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 JTBO76095 146 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 CA2P00918 260 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 IFNA7P01567 189 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 OR8U8P0C7N1 319 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 FXYD3Q14802 87 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 C10orf55Q5SWW7 151 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 RPL7L1Q6DKI1 246 aaKnown RBP8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 ZNF562Q6V9R5 426 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 HSD17B13Q7Z5P4 300 aaPredicted RBP8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 STPG2Q8N412 459 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 TMEM217Q8N7C4 229 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 Q8N9W7 124 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 OR10P1Q8NGE3 313 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 OR10W1Q8NGF6 305 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 OR5C1Q8NGR4 320 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 ST8SIA2Q92186 375 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 RBM14Q96PK6 669 aaKnown RBP8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 SRSF8Q9BRL6 282 aaKnown RBP8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 WFDC1Q9HC57 220 aa8.61□□□□□ -1.03
HLA-DQA1-202ENST00000374949 A6NDX4 124 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 PMS2P5A8MQ11 134 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 FBXO24O75426 580 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 DFFBO76075 338 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 OR13C7P0DN81 318 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 CD28P10747 220 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 TPT1P13693 172 aaKnown RBP8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 NPY1RP25929 384 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 SLC38A11Q08AI6 406 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 ARL16Q0P5N6 197 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 CLINT1Q14677 625 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 C2orf83Q53S99 150 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 OR8G2PQ6IF36 304 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 ETV3LQ6ZN32 361 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 ZNF767PQ75MW2 155 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 HAPLN4Q86UW8 402 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 BAP18Q8IXM2 172 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 UBAC2Q8NBM4 344 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 ZNF680Q8NEM1 530 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 SLC24A4Q8NFF2 622 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 STOML3Q8TAV4 291 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 SRSF12Q8WXF0 261 aaKnown RBP8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 PINX1Q96BK5 328 aaKnown RBP8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 ATP5SQ99766 215 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 SLC25A33Q9BSK2 321 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 NPFFR1Q9GZQ6 430 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 PITPNC1Q9UKF7 332 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 DNAH3Q8TD57 4116 aa8.6□□□□□ -1.03
HLA-DQA1-202ENST00000374949 A0A1B0GW64 132 aa8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 RGS13O14921 159 aa8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 FGF16O43320 207 aa8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 CFDP00746 253 aaPredicted RBP8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 IFNA5P01569 189 aa8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 HLA-DRB1P01911 266 aa8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 IFNA4P05014 189 aa8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 RNASE2P10153 161 aaKnown RBP8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 CX3CL1P78423 397 aa8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 SSBP2P81877 361 aaPredicted RBP8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 WT1-ASQ06250 92 aa8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 ZNF266Q14584 549 aa8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 BSXQ3C1V8 233 aa8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 LILRB2Q8N423 598 aa8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 PHYHIPLQ96FC7 376 aa8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 GGACTQ9BVM4 153 aa8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 ZNF702PQ9H963 129 aa8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 MOB4Q9Y3A3 225 aa8.59□□□□□ -1.03
HLA-DQA1-202ENST00000374949 TENM3Q9P273 2699 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 IGLC7A0M8Q6 106 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 ADARB2-AS1A8MUL3 147 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 TEX22C9J3V5 150 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 M0QZK8 103 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 EXOSC2Q13868 293 aaKnown RBP8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 EIF5AL1Q6IS14 154 aaKnown RBP8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 SLC25A24Q6NUK1 477 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 C16orf82Q7Z2V1 217 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 TMEM219Q86XT9 240 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 C5orf56Q8N8D9 126 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 SCGB1C1Q8TD33 95 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 ABHD5Q8WTS1 349 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 TMEM170AQ8WVE7 144 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 ARPC1AQ92747 370 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 P2RX4Q99571 388 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 CITED2Q99967 270 aaPredicted RBP8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 GINS3Q9BRX5 216 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 ARV1Q9H2C2 271 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 SERTAD4Q9NUC0 356 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 UBQLN2Q9UHD9 624 aa8.58□□□□□ -1.04
HLA-DQA1-202ENST00000374949 IGHV7-81A0A0B4J1V7 117 aa8.57□□□□□ -1.04
HLA-DQA1-202ENST00000374949 AREGP15514 252 aa8.57□□□□□ -1.04
HLA-DQA1-202ENST00000374949 DLK1P80370 383 aa8.57□□□□□ -1.04
HLA-DQA1-202ENST00000374949 NDUFA11Q86Y39 141 aa8.57□□□□□ -1.04
HLA-DQA1-202ENST00000374949 ZNF114Q8NC26 417 aa8.57□□□□□ -1.04
HLA-DQA1-202ENST00000374949 OR4F17Q8NGA8 305 aa8.57□□□□□ -1.04
HLA-DQA1-202ENST00000374949 RNASEH2CQ8TDP1 164 aaKnown RBP8.57□□□□□ -1.04
HLA-DQA1-202ENST00000374949 SCARB1Q8WTV0 552 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms