RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 LY86O95711 162 aa11.59□□□□□ -0.55
HSPG2-201ENST00000374673 HSPB1P04792 205 aaKnown RBP11.59□□□□□ -0.55
HSPG2-201ENST00000374673 ZNF616Q08AN1 781 aa11.59□□□□□ -0.55
HSPG2-201ENST00000374673 C11orf87Q6NUJ2 197 aa11.59□□□□□ -0.55
HSPG2-201ENST00000374673 OR1N2Q8NGR9 330 aa11.59□□□□□ -0.55
HSPG2-201ENST00000374673 EEF1AKMT3Q96AZ1 226 aa11.59□□□□□ -0.55
HSPG2-201ENST00000374673 C2orf50Q96LR7 162 aa11.59□□□□□ -0.55
HSPG2-201ENST00000374673 DUX3Q96PT4 197 aa11.59□□□□□ -0.55
HSPG2-201ENST00000374673 CIB3Q96Q77 187 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-201ENST00000374673 ALG5Q9Y673 324 aa11.59□□□□□ -0.55
HSPG2-201ENST00000374673 U3KQ87 197 aa11.59□□□□□ -0.55
HSPG2-201ENST00000374673 IGHV4OR15-8A0A075B7B6 117 aa11.58□□□□□ -0.56
HSPG2-201ENST00000374673 A0A087WW49 117 aa11.58□□□□□ -0.56
HSPG2-201ENST00000374673 TRBV7-1A0A0A6YYK4 115 aa11.58□□□□□ -0.56
HSPG2-201ENST00000374673 FAM25EA8MYX2 175 aa11.58□□□□□ -0.56
HSPG2-201ENST00000374673 LINC01619G3V211 115 aa11.58□□□□□ -0.56
HSPG2-201ENST00000374673 I3L2K1 104 aa11.58□□□□□ -0.56
HSPG2-201ENST00000374673 K7EIM0 57 aa11.58□□□□□ -0.56
HSPG2-201ENST00000374673 NPY1RP25929 384 aa11.58□□□□□ -0.56
HSPG2-201ENST00000374673 ATP5IP56385 69 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-201ENST00000374673 NOXA1Q86UR1 476 aa11.58□□□□□ -0.56
HSPG2-201ENST00000374673 ZNF502Q8TBZ5 544 aa11.58□□□□□ -0.56
HSPG2-201ENST00000374673 MISP3Q96FF7 219 aa11.58□□□□□ -0.56
HSPG2-201ENST00000374673 CCDC140Q96MF4 163 aa11.58□□□□□ -0.56
HSPG2-201ENST00000374673 ATP6V0BQ99437 205 aa11.58□□□□□ -0.56
HSPG2-201ENST00000374673 MAGT1Q9H0U3 335 aa11.58□□□□□ -0.56
HSPG2-201ENST00000374673 RANGRFQ9HD47 186 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-201ENST00000374673 GSKIPQ9P0R6 139 aa11.58□□□□□ -0.56
HSPG2-201ENST00000374673 PEF1Q9UBV8 284 aaKnown RBP11.58□□□□□ -0.56
HSPG2-201ENST00000374673 WRBO00258 174 aa11.57□□□□□ -0.56
HSPG2-201ENST00000374673 GOSR2O14653 212 aa11.57□□□□□ -0.56
HSPG2-201ENST00000374673 SSNA1O43805 119 aa11.57□□□□□ -0.56
HSPG2-201ENST00000374673 SCGB1D2O95969 90 aa11.57□□□□□ -0.56
HSPG2-201ENST00000374673 MT-CO2P00403 227 aa11.57□□□□□ -0.56
HSPG2-201ENST00000374673 OR8U8P0C7N1 319 aa11.57□□□□□ -0.56
HSPG2-201ENST00000374673 IAPPP10997 89 aa11.57□□□□□ -0.56
HSPG2-201ENST00000374673 POLR2GP62487 172 aaKnown RBP eCLIP11.57□□□□□ -0.56
HSPG2-201ENST00000374673 IL15RAQ13261 267 aa11.57□□□□□ -0.56
HSPG2-201ENST00000374673 LINC00482Q8N8I6 264 aa11.57□□□□□ -0.56
HSPG2-201ENST00000374673 SCARB1Q8WTV0 552 aa11.57□□□□□ -0.56
HSPG2-201ENST00000374673 TMEM170AQ8WVE7 144 aa11.57□□□□□ -0.56
HSPG2-201ENST00000374673 DPF1Q92782 380 aa11.57□□□□□ -0.56
HSPG2-201ENST00000374673 S4R3C0 116 aa11.57□□□□□ -0.56
HSPG2-201ENST00000374673 ANKRD34BA5PLL1 514 aa11.56□□□□□ -0.56
HSPG2-201ENST00000374673 IFNA10P01566 189 aa11.56□□□□□ -0.56
HSPG2-201ENST00000374673 TRBV12-3P01733 135 aa11.56□□□□□ -0.56
HSPG2-201ENST00000374673 IGHV3-23P01764 117 aa11.56□□□□□ -0.56
HSPG2-201ENST00000374673 MBPP02686 304 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-201ENST00000374673 FCGR2BP31994 310 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-201ENST00000374673 TREML4Q6UXN2 200 aa11.56□□□□□ -0.56
HSPG2-201ENST00000374673 RNASEH2CQ8TDP1 164 aaKnown RBP11.56□□□□□ -0.56
HSPG2-201ENST00000374673 PINX1Q96BK5 328 aaKnown RBP11.56□□□□□ -0.56
HSPG2-201ENST00000374673 C21orf62Q9NYP8 219 aa11.56□□□□□ -0.56
HSPG2-201ENST00000374673 RCL1Q9Y2P8 373 aaKnown RBP11.56□□□□□ -0.56
HSPG2-201ENST00000374673 IGHV3-21A0A0B4J1V1 117 aa11.55□□□□□ -0.56
HSPG2-201ENST00000374673 C15orf62A8K5M9 175 aa11.55□□□□□ -0.56
HSPG2-201ENST00000374673 ZP3P21754 424 aa11.55□□□□□ -0.56
HSPG2-201ENST00000374673 RPP30P78346 268 aaKnown RBP11.55□□□□□ -0.56
HSPG2-201ENST00000374673 CLEC19AQ6UXS0 136 aa11.55□□□□□ -0.56
HSPG2-201ENST00000374673 WFDC9Q8NEX5 89 aa11.55□□□□□ -0.56
HSPG2-201ENST00000374673 RAB40CQ96S21 281 aa11.55□□□□□ -0.56
HSPG2-201ENST00000374673 NMES1Q9C002 83 aa11.55□□□□□ -0.56
HSPG2-201ENST00000374673 FNDC4Q9H6D8 234 aaPredicted RBP11.55□□□□□ -0.56
HSPG2-201ENST00000374673 RPS10-NUDT3A0A1W2PQS6 291 aa11.54□□□□□ -0.56
HSPG2-201ENST00000374673 F8W735 103 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-201ENST00000374673 K7EPK0 472 aa11.54□□□□□ -0.56
HSPG2-201ENST00000374673 BMPR1BO00238 502 aa11.54□□□□□ -0.56
HSPG2-201ENST00000374673 SSSCA1O60232 199 aa11.54□□□□□ -0.56
HSPG2-201ENST00000374673 SIX6O95475 246 aa11.54□□□□□ -0.56
HSPG2-201ENST00000374673 CLEC3BP05452 202 aa11.54□□□□□ -0.56
HSPG2-201ENST00000374673 HOXD3P31249 432 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-201ENST00000374673 OPRK1P41145 380 aa11.54□□□□□ -0.56
HSPG2-201ENST00000374673 SLURP1P55000 103 aa11.54□□□□□ -0.56
HSPG2-201ENST00000374673 MFAP4P55083 255 aa11.54□□□□□ -0.56
HSPG2-201ENST00000374673 TAS2R30P59541 319 aa11.54□□□□□ -0.56
HSPG2-201ENST00000374673 CYCSP99999 105 aaKnown RBP11.54□□□□□ -0.56
HSPG2-201ENST00000374673 SMIM8Q96KF7 97 aa11.54□□□□□ -0.56
HSPG2-201ENST00000374673 TXN2Q99757 166 aa11.54□□□□□ -0.56
HSPG2-201ENST00000374673 GAR1Q9NY12 217 aaKnown RBP11.54□□□□□ -0.56
HSPG2-201ENST00000374673 MGAT4CQ9UBM8 478 aa11.54□□□□□ -0.56
HSPG2-201ENST00000374673 PPP5D1E7EU14 171 aa11.53□□□□□ -0.56
HSPG2-201ENST00000374673 GGCTO75223 188 aaKnown RBP11.53□□□□□ -0.56
HSPG2-201ENST00000374673 TMEM50AO95807 157 aa11.53□□□□□ -0.56
HSPG2-201ENST00000374673 CD33P20138 364 aa11.53□□□□□ -0.56
HSPG2-201ENST00000374673 GPR183P32249 361 aa11.53□□□□□ -0.56
HSPG2-201ENST00000374673 ARL3P36405 182 aa11.53□□□□□ -0.56
HSPG2-201ENST00000374673 PAX9P55771 341 aa11.53□□□□□ -0.56
HSPG2-201ENST00000374673 H2BFSP57053 126 aa11.53□□□□□ -0.56
HSPG2-201ENST00000374673 RAB11AP62491 216 aa11.53□□□□□ -0.56
HSPG2-201ENST00000374673 RPEL1Q2QD12 228 aa11.53□□□□□ -0.56
HSPG2-201ENST00000374673 BSCL2Q96G97 398 aaPredicted RBP11.53□□□□□ -0.56
HSPG2-201ENST00000374673 OR4C12Q96R67 309 aa11.53□□□□□ -0.56
HSPG2-201ENST00000374673 PSENENQ9NZ42 101 aa11.53□□□□□ -0.56
HSPG2-201ENST00000374673 LSM5Q9Y4Y9 91 aaKnown RBP11.53□□□□□ -0.56
HSPG2-201ENST00000374673 WNK1Q9H4A3 2382 aa11.53□□□□□ -0.56
HSPG2-201ENST00000374673 TRRAPQ9Y4A5 3859 aa11.53□□□□□ -0.56
HSPG2-201ENST00000374673 H3BP45 60 aa11.52□□□□□ -0.57
HSPG2-201ENST00000374673 TGOLN2O43493 480 aa11.52□□□□□ -0.57
HSPG2-201ENST00000374673 TSC22D2O75157 780 aa11.52□□□□□ -0.57
HSPG2-201ENST00000374673 IFNA4P05014 189 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms