RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 CCL25O15444 150 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 CNIH1O95406 144 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 CNTFRP26992 372 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 MBNL2Q5VZF2 373 aaKnown RBP8.87□□□□□ -0.99
CXCL12-203ENST00000374429 MUC15Q8N387 334 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 C1orf162Q8NEQ5 155 aaPredicted RBP8.87□□□□□ -0.99
CXCL12-203ENST00000374429 OR4S2Q8NH73 311 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 CLDND2Q8NHS1 167 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 TMEM147Q9BVK8 224 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 IFI27L2Q9H2X8 130 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 TPSG1Q9NRR2 321 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 TMEM106BQ9NUM4 274 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 PITPNC1Q9UKF7 332 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 HBE1P02100 147 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 AMBPP02760 352 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 ARL14EPLP0DKL9 152 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 BCL2P10415 239 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 NPY1RP25929 384 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 TNXAQ16473 311 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 LRRC75BQ2VPJ9 315 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 TMEM200BQ69YZ2 307 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 OR9G1Q8NH87 305 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 RITA1Q96K30 269 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 ZNF714Q96N38 554 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 GAFA1Q96PS6 74 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 ACTR3CQ9C0K3 210 aaPredicted RBP8.87□□□□□ -0.99
CXCL12-203ENST00000374429 CSTL1Q9H114 145 aa8.87□□□□□ -0.99
CXCL12-203ENST00000374429 F6UZH7 168 aa8.86□□□□□ -0.99
CXCL12-203ENST00000374429 HPRT1P00492 218 aa8.86□□□□□ -0.99
CXCL12-203ENST00000374429 GCGP01275 180 aa8.86□□□□□ -0.99
CXCL12-203ENST00000374429 RIPPLY3P57055 190 aa8.86□□□□□ -0.99
CXCL12-203ENST00000374429 C17orf58Q2M2W7 97 aa8.86□□□□□ -0.99
CXCL12-203ENST00000374429 LSM10Q969L4 123 aaKnown RBP8.86□□□□□ -0.99
CXCL12-203ENST00000374429 KIAA1456Q9P272 454 aa8.86□□□□□ -0.99
CXCL12-203ENST00000374429 PXMP4Q9Y6I8 212 aa8.86□□□□□ -0.99
CXCL12-203ENST00000374429 MOSP00540 346 aa8.86□□□□□ -0.99
CXCL12-203ENST00000374429 TIMP3P35625 211 aa8.86□□□□□ -0.99
CXCL12-203ENST00000374429 RTL8BQ17RB0 113 aa8.86□□□□□ -0.99
CXCL12-203ENST00000374429 LDLRAD2Q5SZI1 272 aa8.86□□□□□ -0.99
CXCL12-203ENST00000374429 RNASE6Q93091 150 aaKnown RBP8.86□□□□□ -0.99
CXCL12-203ENST00000374429 FAM210BQ96KR6 192 aa8.86□□□□□ -0.99
CXCL12-203ENST00000374429 HRNRQ86YZ3 2850 aaPredicted RBP8.86□□□□□ -0.99
CXCL12-203ENST00000374429 A0A1W2PN81 502 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 KLRD1Q13241 179 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 GUSBP1Q15486 140 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 TMEM41BQ5BJD5 291 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 PCGF1Q9BSM1 259 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 UBTD1Q9HAC8 227 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 IGHV1-69-2A0A0G2JMI3 117 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 NCBP2LA6PVI3 153 aaKnown RBP8.85□□□□□ -0.99
CXCL12-203ENST00000374429 C22orf46C9J442 243 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 IFNA1P01562 189 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 IGHV3-23P01764 117 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 OR10J1P30954 320 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 LOXL3P58215 753 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 PSG5Q15238 335 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 LFNGQ8NES3 379 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 IDI2-AS1Q9NZ38 188 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 TRAV5A0A0B4J249 113 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 C15orf62A8K5M9 175 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 E7EUB6 86 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 IFNL4K9M1U5 179 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 APOA2P02652 100 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 SAA1P0DJI8 122 aaPredicted RBP8.85□□□□□ -0.99
CXCL12-203ENST00000374429 VAMP3Q15836 100 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 KLF17Q5JT82 389 aaPredicted RBP8.85□□□□□ -0.99
CXCL12-203ENST00000374429 EAF1Q96JC9 268 aaPredicted RBP8.85□□□□□ -0.99
CXCL12-203ENST00000374429 HES4Q9HCC6 221 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 NGBQ9NPG2 151 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 PAM16Q9Y3D7 125 aa8.85□□□□□ -0.99
CXCL12-203ENST00000374429 XKRY2A2RUG3 117 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 SH2D7A6NKC9 451 aaPredicted RBP8.84□□□□□ -0.99
CXCL12-203ENST00000374429 H7BYZ3 331 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 PAX1P15863 534 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 NHLH1Q02575 133 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 WDR73Q6P4I2 378 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 TMEM18Q96B42 140 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 FLYWCH2Q96CP2 140 aaKnown RBP8.84□□□□□ -0.99
CXCL12-203ENST00000374429 HSPB7Q9UBY9 170 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 VPS13CQ709C8 3753 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 IGSF10Q6WRI0 2623 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 LMO1P25800 156 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 UQCRFS1P47985 274 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 MEF2BQ02080 365 aaPredicted RBP8.84□□□□□ -0.99
CXCL12-203ENST00000374429 TMEM95Q3KNT9 176 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 PARLQ9H300 379 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 TNFRSF19Q9NS68 423 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 FKBP11Q9NYL4 201 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 C2CD3Q4AC94 2353 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 C17orf112F2Z3M2 114 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 SELENOTP62341 195 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 FXYD3Q14802 87 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 Q6ZS49 121 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 ZCCHC14Q8WYQ9 949 aaKnown RBP8.84□□□□□ -0.99
CXCL12-203ENST00000374429 OR5B12Q96R08 314 aa8.84□□□□□ -0.99
CXCL12-203ENST00000374429 SLC17A3O00476 420 aa8.83□□□□□ -1
CXCL12-203ENST00000374429 CT45A6P0DMU7 189 aa8.83□□□□□ -1
CXCL12-203ENST00000374429 CT45A5P0DMU8 189 aa8.83□□□□□ -1
CXCL12-203ENST00000374429 CT45A7P0DMV0 189 aa8.83□□□□□ -1
CXCL12-203ENST00000374429 SUMO1P63165 101 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms