RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 LINC01545Q5VT33 79 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 ADAMTSL5Q6ZMM2 481 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 SPAG8Q99932 426 aaPredicted RBP7.87□□□□□ -1.15
SF3A3-201ENST00000373019 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.87□□□□□ -1.15
SF3A3-201ENST00000373019 FRYQ5TBA9 3013 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 ZNF318Q5VUA4 2279 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 SPTAN1Q13813 2472 aaKnown RBP7.87□□□□□ -1.15
SF3A3-201ENST00000373019 TRBV6-6A0A0A6YYG2 114 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 NPIPB11E5RHQ5 1161 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 CELA3AP09093 270 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 TMEM177Q53S58 311 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 PRAMEF5Q5TYX0 476 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 PRAMEF6Q5VXH4 476 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 TMEM54Q969K7 222 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 KCNS2Q9ULS6 477 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 BOKQ9UMX3 212 aaPredicted RBP7.87□□□□□ -1.15
SF3A3-201ENST00000373019 A0A1W2PPC4 97 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 ATP5G2Q06055 141 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 LTC4SQ16873 150 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 SLC25A53Q5H9E4 307 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 ZNF257Q9Y2Q1 563 aa7.87□□□□□ -1.15
SF3A3-201ENST00000373019 H0Y8G0 127 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 CER1O95813 267 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 RPL30P62888 115 aaKnown RBP7.86□□□□□ -1.15
SF3A3-201ENST00000373019 TIGITQ495A1 244 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 NHLRC2Q8NBF2 726 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 UBALD1Q8TB05 177 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 C5orf30Q96GV9 206 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 SS18L2Q9UHA2 77 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 DMDP11532 3685 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 TRAV24A0A0B4J272 114 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 FBLL1A6NHQ2 334 aaKnown RBP7.86□□□□□ -1.15
SF3A3-201ENST00000373019 PRSS46E5RG02 174 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 TNFRSF13BO14836 293 aaPredicted RBP7.86□□□□□ -1.15
SF3A3-201ENST00000373019 NEURL1O76050 574 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 FCGR2BP31994 310 aaPredicted RBP7.86□□□□□ -1.15
SF3A3-201ENST00000373019 FOXA3P55318 350 aaPredicted RBP7.86□□□□□ -1.15
SF3A3-201ENST00000373019 TCF15Q12870 199 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 COLCA1Q6ZS62 124 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 ASCL5Q7RTU5 278 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 TEX45Q8NA69 505 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 CHCHD1Q96BP2 118 aaKnown RBP7.86□□□□□ -1.15
SF3A3-201ENST00000373019 ABHD17AQ96GS6 310 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 MS4A5Q9H3V2 200 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 ZNF355PQ9NSJ1 428 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 PSG8Q9UQ74 426 aa7.86□□□□□ -1.15
SF3A3-201ENST00000373019 KLRC4-KLRK1H3BQV0 150 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 DHHO43323 396 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 MPDU1O75352 247 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 PATE4P0C8F1 98 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 SUMO3P55854 103 aaPredicted RBP7.85□□□□□ -1.15
SF3A3-201ENST00000373019 ZNF816Q0VGE8 651 aaPredicted RBP7.85□□□□□ -1.15
SF3A3-201ENST00000373019 WFDC2Q14508 124 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 CEACAM16Q2WEN9 425 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 KRTAP27-1Q3LI81 207 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 SSMEM1Q8WWF3 244 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 TAAR6Q96RI8 345 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 SH2D2AQ9NP31 389 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 IDI2-AS1Q9NZ38 188 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 JPT1Q9UK76 154 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 OR11H12B2RN74 326 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 FABP2P12104 132 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 CAMPP49913 170 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 GUSBP1Q15486 140 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 SAMD5Q5TGI4 173 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 FAM27BQ5VT28 67 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 TEPPQ6URK8 271 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 LINC00696Q6ZRV3 163 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 PIP4P2Q8N4L2 257 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 OR11H1Q8NG94 326 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 OR11H2Q8NH07 326 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 MAP1LC3CQ9BXW4 147 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 KCNIP1Q9NZI2 227 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 CACNA1AO00555 2505 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 A0A1B0GXF2 115 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 NCR2O95944 276 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 ARL4DP49703 201 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 PDLIM3Q53GG5 364 aaPredicted RBP7.85□□□□□ -1.15
SF3A3-201ENST00000373019 ZNF645Q8N7E2 425 aa7.85□□□□□ -1.15
SF3A3-201ENST00000373019 MRPL16Q9NX20 251 aaKnown RBP7.85□□□□□ -1.15
SF3A3-201ENST00000373019 GGTLC3B5MD39 225 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 TLX3O43711 291 aaPredicted RBP7.84□□□□□ -1.15
SF3A3-201ENST00000373019 ZIC3O60481 467 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 INSL3P51460 131 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 FA2HQ7L5A8 372 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 BOD1L2Q8IYS8 172 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 SNRNP40Q96DI7 357 aaKnown RBP7.84□□□□□ -1.15
SF3A3-201ENST00000373019 VGLL1Q99990 258 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 LSM4Q9Y4Z0 139 aaKnown RBP7.84□□□□□ -1.15
SF3A3-201ENST00000373019 INSIG2Q9Y5U4 225 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 IGLV3-19P01714 112 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 CRYGCP07315 174 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 SPINK2P20155 84 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 NBL1P41271 181 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 ZNF138P52744 262 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 AESQ08117 197 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 EIF4EBP1Q13541 118 aaPredicted RBP7.84□□□□□ -1.15
SF3A3-201ENST00000373019 SH2D6Q7Z4S9 175 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 ZNF503Q96F45 646 aa7.84□□□□□ -1.15
SF3A3-201ENST00000373019 C1QTNF5Q9BXJ0 243 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms