RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 MGST2Q99735 147 aa11.38□□□□□ -0.59
LDB3-204ENST00000372066 CTDSP1Q9GZU7 261 aa11.38□□□□□ -0.59
LDB3-204ENST00000372066 TMEM133Q9H2Q1 129 aa11.38□□□□□ -0.59
LDB3-204ENST00000372066 NAT8Q9UHE5 227 aa11.38□□□□□ -0.59
LDB3-204ENST00000372066 PXMP4Q9Y6I8 212 aa11.38□□□□□ -0.59
LDB3-204ENST00000372066 TEX50A0A1B0GTY4 177 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 ZNF727A8MUV8 499 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 SLC25A16P16260 332 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 CD81P60033 236 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 RPL8P62917 257 aaKnown RBP11.37□□□□□ -0.59
LDB3-204ENST00000372066 VMA21Q3ZAQ7 101 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 CYB5R2Q6BCY4 276 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 C1QL4Q86Z23 238 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 TGIF2LXQ8IUE1 241 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 MRPL41Q8IXM3 137 aaKnown RBP11.37□□□□□ -0.59
LDB3-204ENST00000372066 C8orf46Q8TAG6 207 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 NANPQ8TBE9 248 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 COMMD5Q9GZQ3 224 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 RAB1BQ9H0U4 201 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 SDF2L1Q9HCN8 221 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 hCG_1809904A0A1W2PP81 198 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 A0A1W2PR64 198 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 A0A1W2PRV1 198 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 SRRM4A7MD48 611 aaKnown RBP11.37□□□□□ -0.59
LDB3-204ENST00000372066 PDE6DO43924 150 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 LGALS7P47929 136 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 PRRX1P54821 245 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 ERHP84090 104 aaKnown RBP11.37□□□□□ -0.59
LDB3-204ENST00000372066 HNF4GQ14541 408 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 ARSJQ5FYB0 599 aaPredicted RBP11.37□□□□□ -0.59
LDB3-204ENST00000372066 WDR25Q64LD2 544 aaPredicted RBP11.37□□□□□ -0.59
LDB3-204ENST00000372066 TMEM144Q7Z5S9 345 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 HINT2Q9BX68 163 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 MIOXQ9UGB7 285 aa11.37□□□□□ -0.59
LDB3-204ENST00000372066 MXRA5Q9NR99 2828 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 F6UZH7 168 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 TGOLN2O43493 480 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 YIF1AO95070 293 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 CXorf1O96002 111 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 STAG3L2P0CL84 134 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 STAG3L3P0CL85 134 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 EFNA4P52798 201 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 B2MP61769 119 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 RHOBP62745 196 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 FAM24BQ8N5W8 94 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 OR8B3Q8NGG8 313 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 C10orf105Q8TEF2 133 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 NEU4Q8WWR8 484 aaPredicted RBP11.36□□□□□ -0.59
LDB3-204ENST00000372066 CACNG8Q8WXS5 425 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 ISOC2Q96AB3 205 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 SLC35E1Q96K37 410 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 OR8B2Q96RD0 313 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 SMIM7Q9BQ49 75 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 NDUFA4L2Q9NRX3 87 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 ZNRD1Q9P1U0 126 aa11.36□□□□□ -0.59
LDB3-204ENST00000372066 AMMECR1Q9Y4X0 333 aaPredicted RBP11.36□□□□□ -0.59
LDB3-204ENST00000372066 CR1P17927 2039 aa11.35□□□□□ -0.59
LDB3-204ENST00000372066 CLDN34H7C241 214 aa11.35□□□□□ -0.59
LDB3-204ENST00000372066 MT-CO2P00403 227 aa11.35□□□□□ -0.59
LDB3-204ENST00000372066 RNASE2P10153 161 aaKnown RBP11.35□□□□□ -0.59
LDB3-204ENST00000372066 GPX4P36969 197 aaPredicted RBP11.35□□□□□ -0.59
LDB3-204ENST00000372066 RND2P52198 227 aa11.35□□□□□ -0.59
LDB3-204ENST00000372066 SUB1P53999 127 aaKnown RBP eCLIP11.35□□□□□ -0.59
LDB3-204ENST00000372066 HABP2Q14520 560 aaPredicted RBP11.35□□□□□ -0.59
LDB3-204ENST00000372066 TMEM241Q24JQ0 296 aa11.35□□□□□ -0.59
LDB3-204ENST00000372066 BEND2Q8NDZ0 799 aa11.35□□□□□ -0.59
LDB3-204ENST00000372066 TIMD4Q96H15 378 aa11.35□□□□□ -0.59
LDB3-204ENST00000372066 C19orf24Q9BVV8 132 aa11.35□□□□□ -0.59
LDB3-204ENST00000372066 TMEM160Q9NX00 188 aa11.35□□□□□ -0.59
LDB3-204ENST00000372066 ARL2-SNX15V9GYD0 113 aa11.35□□□□□ -0.59
LDB3-204ENST00000372066 LY6HO94772 140 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 VENTXO95231 258 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 IGHV4-31P0DP07 118 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 ERVFRD-1P60508 538 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 PRR20EP86478 221 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 PRR20CP86479 221 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 PRR20DP86480 221 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 PRR20BP86481 221 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 PRR20AP86496 221 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 HLA-DRB5Q30154 266 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 MIC13Q5XKP0 118 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 ZNF841Q6ZN19 808 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 PNKDQ8N490 385 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 C11orf42Q8N5U0 333 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 OR4F5Q8NH21 305 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 RNASEH2CQ8TDP1 164 aaKnown RBP11.34□□□□□ -0.59
LDB3-204ENST00000372066 OR4F4Q96R69 305 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 TMPRSS5Q9H3S3 457 aa11.34□□□□□ -0.59
LDB3-204ENST00000372066 IGHV2-26A0A0B4J1V2 119 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 C11orf94C9JXX5 98 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 HMGB3O15347 200 aaKnown RBP11.33□□□□□ -0.6
LDB3-204ENST00000372066 PAGE4O60829 102 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 IGLV1-47P01700 117 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 OPN1MWP04001 364 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 OPN1MW2P0DN77 364 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 OPN1MW3P0DN78 364 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 COL8A2P25067 703 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 CD69Q07108 199 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 STPG3Q8N7X2 389 aa11.33□□□□□ -0.6
LDB3-204ENST00000372066 TEX45Q8NA69 505 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms