RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 SOX15O60248 233 aa12.45□□□□□ -0.42
PFDN4-201ENST00000371419 IGKV1-5P01602 117 aa12.45□□□□□ -0.42
PFDN4-201ENST00000371419 OR9G9P0C7N8 305 aa12.45□□□□□ -0.42
PFDN4-201ENST00000371419 KHDC1LQ5JSQ8 128 aa12.45□□□□□ -0.42
PFDN4-201ENST00000371419 ASPHD1Q5U4P2 390 aa12.45□□□□□ -0.42
PFDN4-201ENST00000371419 UBAC2Q8NBM4 344 aa12.45□□□□□ -0.42
PFDN4-201ENST00000371419 RNF141Q8WVD5 230 aa12.45□□□□□ -0.42
PFDN4-201ENST00000371419 PCNPQ8WW12 178 aaKnown RBP12.45□□□□□ -0.42
PFDN4-201ENST00000371419 LYRM2Q9NU23 88 aaPredicted RBP12.45□□□□□ -0.42
PFDN4-201ENST00000371419 PRNDQ9UKY0 176 aa12.45□□□□□ -0.42
PFDN4-201ENST00000371419 SSSCA1O60232 199 aa12.44□□□□□ -0.42
PFDN4-201ENST00000371419 RPLP1P05386 114 aaKnown RBP12.44□□□□□ -0.42
PFDN4-201ENST00000371419 APELAP0DMC3 54 aa12.44□□□□□ -0.42
PFDN4-201ENST00000371419 PF4V1P10720 104 aa12.44□□□□□ -0.42
PFDN4-201ENST00000371419 MYOD1P15172 320 aa12.44□□□□□ -0.42
PFDN4-201ENST00000371419 RPL23AP62750 156 aaKnown RBP12.44□□□□□ -0.42
PFDN4-201ENST00000371419 BAXQ07812 192 aa12.44□□□□□ -0.42
PFDN4-201ENST00000371419 NSUN5P1Q3KNT7 163 aa12.44□□□□□ -0.42
PFDN4-201ENST00000371419 LCNL1Q6ZST4 164 aa12.44□□□□□ -0.42
PFDN4-201ENST00000371419 OR5T1Q8NG75 326 aa12.44□□□□□ -0.42
PFDN4-201ENST00000371419 FKBP11Q9NYL4 201 aa12.44□□□□□ -0.42
PFDN4-201ENST00000371419 CACNG5Q9UF02 275 aa12.44□□□□□ -0.42
PFDN4-201ENST00000371419 A0A1W2PRX2 142 aa12.43□□□□□ -0.42
PFDN4-201ENST00000371419 C15orf61A6NNL5 157 aa12.43□□□□□ -0.42
PFDN4-201ENST00000371419 ADARB2-AS1A8MUL3 147 aa12.43□□□□□ -0.42
PFDN4-201ENST00000371419 TEX22C9J3V5 150 aa12.43□□□□□ -0.42
PFDN4-201ENST00000371419 E7EUB6 86 aa12.43□□□□□ -0.42
PFDN4-201ENST00000371419 P0C879 139 aa12.43□□□□□ -0.42
PFDN4-201ENST00000371419 CAV2P51636 162 aa12.43□□□□□ -0.42
PFDN4-201ENST00000371419 OR2B8PP59922 312 aa12.43□□□□□ -0.42
PFDN4-201ENST00000371419 EWSR1Q01844 656 aaKnown RBP eCLIP12.43□□□□□ -0.42
PFDN4-201ENST00000371419 RPL7L1Q6DKI1 246 aaKnown RBP12.43□□□□□ -0.42
PFDN4-201ENST00000371419 OR4A16Q8NH70 328 aa12.43□□□□□ -0.42
PFDN4-201ENST00000371419 KLK15Q9H2R5 256 aa12.43□□□□□ -0.42
PFDN4-201ENST00000371419 OR51B2Q9Y5P1 312 aa12.43□□□□□ -0.42
PFDN4-201ENST00000371419 TRRAPQ9Y4A5 3859 aa12.43□□□□□ -0.42
PFDN4-201ENST00000371419 TEX50A0A1B0GTY4 177 aa12.42□□□□□ -0.42
PFDN4-201ENST00000371419 A0A1B0GW64 132 aa12.42□□□□□ -0.42
PFDN4-201ENST00000371419 MED6O75586 246 aa12.42□□□□□ -0.42
PFDN4-201ENST00000371419 RAB9AP51151 201 aa12.42□□□□□ -0.42
PFDN4-201ENST00000371419 FAM74A1Q5RGS3 127 aa12.42□□□□□ -0.42
PFDN4-201ENST00000371419 TMEM252Q8N6L7 170 aa12.42□□□□□ -0.42
PFDN4-201ENST00000371419 OR1L8Q8NGR8 309 aa12.42□□□□□ -0.42
PFDN4-201ENST00000371419 FAM110DQ8TAY7 271 aaPredicted RBP12.42□□□□□ -0.42
PFDN4-201ENST00000371419 CXorf58Q96LI9 332 aa12.42□□□□□ -0.42
PFDN4-201ENST00000371419 QTRT1Q9BXR0 403 aaKnown RBP12.42□□□□□ -0.42
PFDN4-201ENST00000371419 MAGT1Q9H0U3 335 aa12.42□□□□□ -0.42
PFDN4-201ENST00000371419 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.42□□□□□ -0.42
PFDN4-201ENST00000371419 ZNF355PQ9NSJ1 428 aa12.42□□□□□ -0.42
PFDN4-201ENST00000371419 TMEM14BQ9NUH8 114 aa12.42□□□□□ -0.42
PFDN4-201ENST00000371419 FAM24AA6NFZ4 105 aa12.41□□□□□ -0.42
PFDN4-201ENST00000371419 CGB1A6NKQ9 187 aa12.41□□□□□ -0.42
PFDN4-201ENST00000371419 H3BUA1 57 aa12.41□□□□□ -0.42
PFDN4-201ENST00000371419 SYNGR2O43760 224 aa12.41□□□□□ -0.42
PFDN4-201ENST00000371419 RBMXL2O75526 392 aaKnown RBP12.41□□□□□ -0.42
PFDN4-201ENST00000371419 TAS2R30P59541 319 aa12.41□□□□□ -0.42
PFDN4-201ENST00000371419 ZNF266Q14584 549 aa12.41□□□□□ -0.42
PFDN4-201ENST00000371419 IZUMO4Q1ZYL8 232 aa12.41□□□□□ -0.42
PFDN4-201ENST00000371419 Q6ZRM9 215 aa12.41□□□□□ -0.42
PFDN4-201ENST00000371419 HSD17B13Q7Z5P4 300 aaPredicted RBP12.41□□□□□ -0.42
PFDN4-201ENST00000371419 TTC9CQ8N5M4 171 aa12.41□□□□□ -0.42
PFDN4-201ENST00000371419 OR5B3Q8NH48 314 aa12.41□□□□□ -0.42
PFDN4-201ENST00000371419 MYOZ3Q8TDC0 251 aa12.41□□□□□ -0.42
PFDN4-201ENST00000371419 TMED6Q8WW62 240 aa12.41□□□□□ -0.42
PFDN4-201ENST00000371419 MS4A10Q96PG2 267 aa12.41□□□□□ -0.42
PFDN4-201ENST00000371419 SRSF8Q9BRL6 282 aaKnown RBP12.41□□□□□ -0.42
PFDN4-201ENST00000371419 SMIM3Q9BZL3 60 aa12.41□□□□□ -0.42
PFDN4-201ENST00000371419 ARV1Q9H2C2 271 aa12.41□□□□□ -0.42
PFDN4-201ENST00000371419 VWFP04275 2813 aa12.41□□□□□ -0.42
PFDN4-201ENST00000371419 BRI3O95415 125 aa12.4□□□□□ -0.42
PFDN4-201ENST00000371419 CDX1P47902 265 aaPredicted RBP12.4□□□□□ -0.42
PFDN4-201ENST00000371419 EIF4E3Q8N5X7 224 aaKnown RBP12.4□□□□□ -0.42
PFDN4-201ENST00000371419 SAT2Q96F10 170 aaPredicted RBP12.4□□□□□ -0.42
PFDN4-201ENST00000371419 SMIM8Q96KF7 97 aa12.4□□□□□ -0.42
PFDN4-201ENST00000371419 HINT2Q9BX68 163 aa12.4□□□□□ -0.42
PFDN4-201ENST00000371419 NDUFA4L2Q9NRX3 87 aa12.4□□□□□ -0.42
PFDN4-201ENST00000371419 CACFD1Q9UGQ2 172 aa12.4□□□□□ -0.42
PFDN4-201ENST00000371419 ZNF257Q9Y2Q1 563 aa12.4□□□□□ -0.42
PFDN4-201ENST00000371419 WNK1Q9H4A3 2382 aa12.4□□□□□ -0.42
PFDN4-201ENST00000371419 IGSF23A1L1A6 192 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 MFSD2BA6NFX1 497 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 NPIPB5A8MRT5 1133 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 NUDT19A8MXV4 375 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 LY86O95711 162 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 TRGV3P03979 118 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 SEC11BP0C7V7 166 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 AREGP15514 252 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 PAX9P55771 341 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 TPPP2P59282 170 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 NHLH2Q02577 135 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 KIAA0141Q14154 515 aaPredicted RBP12.4□□□□□ -0.43
PFDN4-201ENST00000371419 ZNF429Q86V71 674 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 STX12Q86Y82 276 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 ZNF491Q8N8L2 437 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 KLHL30-AS1Q8NEE0 82 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 OR4F17Q8NGA8 305 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 UBE2E2Q96LR5 201 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 OR4F4Q96R69 305 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 GINS3Q9BRX5 216 aa12.4□□□□□ -0.43
PFDN4-201ENST00000371419 IGLC7A0M8Q6 106 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms