RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 FCGR3AP08637 254 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 DUX4L2P0CJ85 424 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 DUX4L3P0CJ86 424 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 DUX4L5P0CJ88 424 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 DUX4L6P0CJ89 424 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 DUX4L7P0CJ90 424 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 AKAIN1P0CW23 69 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 PSG7Q13046 419 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 ITPR1Q14643 2758 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 MRGPRG-AS1Q2M3A8 158 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 ZFAND6Q6FIF0 208 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 DUX4L9Q6RFH8 374 aaPredicted RBP3.07□□□□□ -1.92
MCF2-203ENST00000370576 MDP1Q86V88 176 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 EXOC3-AS1Q8N2X6 119 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 FAAP24Q9BTP7 215 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 SCRT1Q9BWW7 348 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 TMEM59Q9BXS4 323 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 Q9HAA7 133 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 DUX4Q9UBX2 424 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 PCNX2A6NKB5 2137 aa3.07□□□□□ -1.92
MCF2-203ENST00000370576 DUS4LO95620 317 aaKnown RBP3.06□□□□□ -1.92
MCF2-203ENST00000370576 ABOP16442 354 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 ZNF93P35789 620 aaPredicted RBP3.06□□□□□ -1.92
MCF2-203ENST00000370576 DEFA1P59665 94 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 DEFA3P59666 94 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 CX3CL1P78423 397 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 IZUMO4Q1ZYL8 232 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 Q6ZRG5 221 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 SLC35E3Q7Z769 313 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 SAMD12Q8N8I0 201 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 OR10AD1Q8NGE0 317 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 OR5AP2Q8NGF4 316 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 FNDC9Q8TBE3 224 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 GNB1LQ9BYB4 327 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 TMEM126AQ9H061 195 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 SCP2D1Q9UJQ7 156 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 PRNDQ9UKY0 176 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 ST3GAL6Q9Y274 331 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 ZFHX2Q9C0A1 2572 aaPredicted RBP3.06□□□□□ -1.92
MCF2-203ENST00000370576 UBR5O95071 2799 aaPredicted RBP3.06□□□□□ -1.92
MCF2-203ENST00000370576 SSNA1O43805 119 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 NDUFS7O75251 213 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 ATG12O94817 140 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 CD2P06729 351 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 MYOD1P15172 320 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 AZU1P20160 251 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 APOC4P55056 127 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 LPAL2Q16609 132 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 NOTCH2NLQ7Z3S9 236 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 SNX29P2Q8IUI4 249 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 FMC1Q96HJ9 113 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 DIRAS2Q96HU8 199 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 C2orf48Q96LS8 159 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 RARRES2Q99969 163 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 NAT8BQ9UHF3 227 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 TNFSF18Q9UNG2 199 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 CHD6Q8TD26 2715 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 DYSFO75923 2080 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 A0A096LNT2 108 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 IGHV3-15A0A0B4J1V0 119 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 A0A0G2JLM5 398 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 ZNF705EA8MWA4 302 aaPredicted RBP3.06□□□□□ -1.92
MCF2-203ENST00000370576 PDCD6O75340 191 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 MRPL33O75394 65 aaKnown RBP3.06□□□□□ -1.92
MCF2-203ENST00000370576 COL8A1P27658 744 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 SAA4P35542 130 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 ZNF101Q8IZC7 436 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 MUC15Q8N387 334 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 LINC00337Q8N6G1 96 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 FAM218AQ96MZ4 157 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 FBXL15Q9H469 300 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 MAP6D1Q9H9H5 199 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 OR1A1Q9P1Q5 309 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 HSPB8Q9UJY1 196 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 DSCAMO60469 2012 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 CMYA5Q8N3K9 4069 aa3.06□□□□□ -1.92
MCF2-203ENST00000370576 IGKV1D-8A0A087WSZ0 117 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 C1QL1O75973 258 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 SFT2D2O95562 160 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 SCTP09683 121 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 CECR9P0C854 216 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 LSM3P62310 102 aaKnown RBP3.05□□□□□ -1.92
MCF2-203ENST00000370576 PRR3P79522 188 aaKnown RBP3.05□□□□□ -1.92
MCF2-203ENST00000370576 MXD1Q05195 221 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 TMEM187Q14656 261 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 NMSQ5H8A3 153 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 PDZD9Q8IXQ8 264 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 C11orf42Q8N5U0 333 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.05□□□□□ -1.92
MCF2-203ENST00000370576 OR13A1Q8NGR1 328 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 ZNF431Q8TF32 576 aaPredicted RBP3.05□□□□□ -1.92
MCF2-203ENST00000370576 TNFAIP8L1Q8WVP5 186 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 AQP10Q96PS8 301 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 CYTL1Q9NRR1 136 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 KALRNO60229 2985 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 CFAP47Q6ZTR5 3102 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 ANK3Q12955 4377 aaKnown RBP3.05□□□□□ -1.92
MCF2-203ENST00000370576 CD300LBA8K4G0 201 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 DEFB108AA8MXU0 73 aa3.05□□□□□ -1.92
MCF2-203ENST00000370576 FNDC10F2Z333 226 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms