RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 PRDX2P32119 198 aa8.62□□□□□ -1.03
PRPF38B-201ENST00000370021 PRB3Q04118 309 aaPredicted RBP8.62□□□□□ -1.03
PRPF38B-201ENST00000370021 FOXL2NBQ6ZUU3 175 aa8.62□□□□□ -1.03
PRPF38B-201ENST00000370021 LINC00173Q6ZV60 143 aa8.62□□□□□ -1.03
PRPF38B-201ENST00000370021 WDR86Q86TI4 376 aa8.62□□□□□ -1.03
PRPF38B-201ENST00000370021 OR10W1Q8NGF6 305 aa8.62□□□□□ -1.03
PRPF38B-201ENST00000370021 ORAOV1Q8WV07 137 aa8.62□□□□□ -1.03
PRPF38B-201ENST00000370021 H1FXQ92522 213 aaKnown RBP8.62□□□□□ -1.03
PRPF38B-201ENST00000370021 TMEM45BQ96B21 275 aa8.62□□□□□ -1.03
PRPF38B-201ENST00000370021 MUC3AQ02505 3323 aa8.62□□□□□ -1.03
PRPF38B-201ENST00000370021 OR2M7Q8NG81 312 aa8.62□□□□□ -1.03
PRPF38B-201ENST00000370021 KLF14Q8TD94 323 aaPredicted RBP8.62□□□□□ -1.03
PRPF38B-201ENST00000370021 CST9LQ9H4G1 147 aa8.62□□□□□ -1.03
PRPF38B-201ENST00000370021 PRDM6Q9NQX0 595 aa8.62□□□□□ -1.03
PRPF38B-201ENST00000370021 V9GYV3 84 aa8.62□□□□□ -1.03
PRPF38B-201ENST00000370021 PCNX2A6NKB5 2137 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 MPDU1O75352 247 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 NMUP48645 174 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 CX3CL1P78423 397 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 PEAR1Q5VY43 1037 aaPredicted RBP8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 HCP5Q6MZN7 132 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 TMEM136Q6ZRR5 245 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 C18orf32Q8TCD1 76 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 B3GALT5-AS1P59052 145 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 LINC00596Q86U02 117 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 MOGAT3Q86VF5 341 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 BPIFA4PQ86YQ2 179 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 ZBTB34Q8NCN2 500 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 OR52E5Q8NH55 327 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 CORO2AQ92828 525 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 MAP1LC3CQ9BXW4 147 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 PKIBQ9C010 78 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 SSUH2Q9Y2M2 353 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 ACACAQ13085 2346 aa8.61□□□□□ -1.03
PRPF38B-201ENST00000370021 IGHV3-72A0A0B4J1Y9 119 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 H3BUT2 72 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 RBX1P62877 108 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 TMEM164Q5U3C3 297 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 OR4S2Q8NH73 311 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 NUDT11Q96G61 164 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 PAXXQ9BUH6 204 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 TTTY12Q9BZ98 90 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 GAGE12BA1L429 117 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 PAX1P15863 534 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 COL8A1P27658 744 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 IL11RAQ14626 422 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 EBLN2Q6P2I7 272 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 Q6ZS49 121 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 OR2V2Q96R30 315 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 IGHV2OR16-5A0A0B4J2B6 119 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 GFRA3O60609 400 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 MOSP00540 346 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 P01737 135 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 C6orf15Q6UXA7 325 aaPredicted RBP8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 FA2HQ7L5A8 372 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 OR1L4Q8NGR5 311 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 CT55Q8WUE5 264 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 NPIPB3Q92617 1050 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 C5orf30Q96GV9 206 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 COQ2Q96H96 371 aa8.6□□□□□ -1.03
PRPF38B-201ENST00000370021 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 GNG7O60262 68 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 DUTP33316 252 aaKnown RBP8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 MEOX1P50221 254 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 HSPE1P61604 102 aaKnown RBP8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 Q0VG73 95 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 VWC2Q2TAL6 325 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 TMEM177Q53S58 311 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 OCIAD2Q56VL3 154 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 VWA1Q6PCB0 445 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 NOTCH3Q9UM47 2321 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 NAV3Q8IVL0 2385 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 DNPH1O43598 174 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 SAP30O75446 220 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 CRYABP02511 175 aaKnown RBP8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 C8orf88P0DMB2 117 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 Q0VFX4 171 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 ATP1A1-AS1Q5TC04 95 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 SNRNP40Q96DI7 357 aaKnown RBP8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 SIT1Q9Y3P8 196 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 HCFC1P51610 2035 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 PMS2P5A8MQ11 134 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 ISLRO14498 428 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 ERHP84090 104 aaKnown RBP8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 TBR1Q16650 682 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 ZNF718Q3SXZ3 478 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 NUP35Q8NFH5 326 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 NUDT10Q8NFP7 164 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 HES4Q9HCC6 221 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 CPAMD8Q8IZJ3 1885 aa8.59□□□□□ -1.03
PRPF38B-201ENST00000370021 IGLV3-19P01714 112 aa8.58□□□□□ -1.04
PRPF38B-201ENST00000370021 CLDN18P56856 261 aa8.58□□□□□ -1.04
PRPF38B-201ENST00000370021 ARF6P62330 175 aa8.58□□□□□ -1.04
PRPF38B-201ENST00000370021 C10orf113Q5VZT2 155 aa8.58□□□□□ -1.04
PRPF38B-201ENST00000370021 Q6ZR03 302 aa8.58□□□□□ -1.04
PRPF38B-201ENST00000370021 PPP1R32Q7Z5V6 425 aa8.58□□□□□ -1.04
PRPF38B-201ENST00000370021 PRNTQ86SH4 94 aa8.58□□□□□ -1.04
PRPF38B-201ENST00000370021 PDPNQ86YL7 162 aa8.58□□□□□ -1.04
PRPF38B-201ENST00000370021 SPACA3Q8IXA5 215 aa8.58□□□□□ -1.04
PRPF38B-201ENST00000370021 TXNDC17Q9BRA2 123 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms