RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 MFAP4P55083 255 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 TAS2R46P59540 309 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 UBE2NLQ5JXB2 153 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 TMEM69Q5SWH9 247 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 OR6F1Q8NGZ6 308 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 PINX1Q96BK5 328 aaKnown RBP7.61□□□□□ -1.19
CLRN3-201ENST00000368671 ZNF414Q96IQ9 312 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 CMTM3Q96MX0 182 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 TSC22D3Q99576 134 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 RARRES2Q99969 163 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 CSTL1Q9H114 145 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 FBXL17Q9UF56 701 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 ANAPC10Q9UM13 185 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.6□□□□□ -1.19
CLRN3-201ENST00000368671 I3L2K1 104 aa7.6□□□□□ -1.19
CLRN3-201ENST00000368671 GNG7O60262 68 aa7.6□□□□□ -1.19
CLRN3-201ENST00000368671 MT-CO2P00403 227 aa7.6□□□□□ -1.19
CLRN3-201ENST00000368671 EIF4EP06730 217 aaKnown RBP7.6□□□□□ -1.19
CLRN3-201ENST00000368671 HLA-DMAP28067 261 aa7.6□□□□□ -1.19
CLRN3-201ENST00000368671 CMC4P56277 68 aaPredicted RBP7.6□□□□□ -1.19
CLRN3-201ENST00000368671 NANOS2P60321 138 aaKnown RBP7.6□□□□□ -1.19
CLRN3-201ENST00000368671 SAMD12Q8N8I0 201 aa7.6□□□□□ -1.19
CLRN3-201ENST00000368671 OR1P1Q8NH06 330 aa7.6□□□□□ -1.19
CLRN3-201ENST00000368671 OR4A16Q8NH70 328 aa7.6□□□□□ -1.19
CLRN3-201ENST00000368671 GATAD1Q8WUU5 269 aa7.6□□□□□ -1.19
CLRN3-201ENST00000368671 KRTAP4-12Q9BQ66 201 aa7.6□□□□□ -1.19
CLRN3-201ENST00000368671 TMEM14BQ9NUH8 114 aa7.6□□□□□ -1.19
CLRN3-201ENST00000368671 TRAV14DV4A0A0A6YYC5 116 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 TMEM127O75204 238 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 CA1P00915 261 aaPredicted RBP7.59□□□□□ -1.19
CLRN3-201ENST00000368671 NAT1P18440 290 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 S100GP29377 79 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 PRSS3P35030 304 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 HRH1P35367 487 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 TSPAN5P62079 268 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 LSM3P62310 102 aaKnown RBP7.59□□□□□ -1.19
CLRN3-201ENST00000368671 RBMS2Q15434 407 aaKnown RBP7.59□□□□□ -1.19
CLRN3-201ENST00000368671 SPINK9Q5DT21 86 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 FAM90A2PQ658T7 463 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 LGALS9CQ6DKI2 356 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 TCF24Q7RTU0 167 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 H2BFWTQ7Z2G1 175 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 TBC1D26Q86UD7 250 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 CROCCP3Q8IVE0 287 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 CADM3Q8N126 398 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 OR11H2Q8NH07 326 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 C11orf45Q8TAV5 145 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 OR10C1Q96KK4 312 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 TXN2Q99757 166 aa7.59□□□□□ -1.19
CLRN3-201ENST00000368671 NXF2Q9GZY0 626 aaKnown RBP7.59□□□□□ -1.19
CLRN3-201ENST00000368671 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.59□□□□□ -1.19
CLRN3-201ENST00000368671 IGHV3-66A0A0C4DH42 116 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 DEFB4AO15263 64 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 ST8SIA3O43173 380 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 IGKV1-39P01597 117 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 IGKV1D-39P04432 117 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 IFNA4P05014 189 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 RPS19P39019 145 aaKnown RBP7.58□□□□□ -1.2
CLRN3-201ENST00000368671 PAFAH1B2P68402 229 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 PRCDQ00LT1 54 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 LEMD1Q68G75 181 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 LPCAT3Q6P1A2 487 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 LYSMD2Q8IV50 215 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 ST8SIA2Q92186 375 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 MRGPRFQ96AM1 343 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 SEC22AQ96IW7 307 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 GINS3Q9BRX5 216 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 KRTAP17-1Q9BYP8 105 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 MFFQ9GZY8 342 aa7.58□□□□□ -1.2
CLRN3-201ENST00000368671 KRTAP9-6A0A140TA67 174 aa7.57□□□□□ -1.2
CLRN3-201ENST00000368671 DNASE2O00115 360 aaPredicted RBP7.57□□□□□ -1.2
CLRN3-201ENST00000368671 APOHP02749 345 aaPredicted RBP7.57□□□□□ -1.2
CLRN3-201ENST00000368671 DEFB131AP59861 70 aa7.57□□□□□ -1.2
CLRN3-201ENST00000368671 RPL11P62913 178 aaKnown RBP7.57□□□□□ -1.2
CLRN3-201ENST00000368671 ERHP84090 104 aaKnown RBP7.57□□□□□ -1.2
CLRN3-201ENST00000368671 TMEM187Q14656 261 aa7.57□□□□□ -1.2
CLRN3-201ENST00000368671 IZUMO4Q1ZYL8 232 aa7.57□□□□□ -1.2
CLRN3-201ENST00000368671 TOMM20LQ6UXN7 152 aa7.57□□□□□ -1.2
CLRN3-201ENST00000368671 ZNF114Q8NC26 417 aa7.57□□□□□ -1.2
CLRN3-201ENST00000368671 C11orf68Q9H3H3 251 aaKnown RBP7.57□□□□□ -1.2
CLRN3-201ENST00000368671 DFFBO76075 338 aa7.56□□□□□ -1.2
CLRN3-201ENST00000368671 HSPE1P61604 102 aaKnown RBP7.56□□□□□ -1.2
CLRN3-201ENST00000368671 KCTD21Q4G0X4 260 aa7.56□□□□□ -1.2
CLRN3-201ENST00000368671 ZNF600Q6ZNG1 722 aa7.56□□□□□ -1.2
CLRN3-201ENST00000368671 SNX29P2Q8IUI4 249 aa7.56□□□□□ -1.2
CLRN3-201ENST00000368671 LILRB2Q8N423 598 aa7.56□□□□□ -1.2
CLRN3-201ENST00000368671 FAM24BQ8N5W8 94 aa7.56□□□□□ -1.2
CLRN3-201ENST00000368671 SLC35G3Q8N808 338 aa7.56□□□□□ -1.2
CLRN3-201ENST00000368671 DUSP18Q8NEJ0 188 aa7.56□□□□□ -1.2
CLRN3-201ENST00000368671 GPX8Q8TED1 209 aa7.56□□□□□ -1.2
CLRN3-201ENST00000368671 C2CD4CQ8TF44 421 aa7.56□□□□□ -1.2
CLRN3-201ENST00000368671 MS4A6AQ9H2W1 248 aa7.56□□□□□ -1.2
CLRN3-201ENST00000368671 VSIRQ9H7M9 311 aa7.56□□□□□ -1.2
CLRN3-201ENST00000368671 FAM212BQ9NTI7 297 aaPredicted RBP7.56□□□□□ -1.2
CLRN3-201ENST00000368671 COMMD3Q9UBI1 195 aa7.56□□□□□ -1.2
CLRN3-201ENST00000368671 RABAC1Q9UI14 185 aa7.56□□□□□ -1.2
CLRN3-201ENST00000368671 PUS1Q9Y606 427 aaKnown RBP eCLIP7.56□□□□□ -1.2
CLRN3-201ENST00000368671 PGAM2P15259 253 aa7.55□□□□□ -1.2
CLRN3-201ENST00000368671 RCVRNP35243 200 aa7.55□□□□□ -1.2
CLRN3-201ENST00000368671 SNCAP37840 140 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms