RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 HBG2P69892 147 aa7□□□□□ -1.29
TPM3-213ENST00000368545 OR4A47Q6IF82 309 aa7□□□□□ -1.29
TPM3-213ENST00000368545 STPG2Q8N412 459 aa7□□□□□ -1.29
TPM3-213ENST00000368545 PNKDQ8N490 385 aa7□□□□□ -1.29
TPM3-213ENST00000368545 OR4A5Q8NH83 315 aa7□□□□□ -1.29
TPM3-213ENST00000368545 LRRC20Q8TCA0 184 aa7□□□□□ -1.29
TPM3-213ENST00000368545 DTD1Q8TEA8 209 aa7□□□□□ -1.29
TPM3-213ENST00000368545 LHX4Q969G2 390 aa7□□□□□ -1.29
TPM3-213ENST00000368545 RPEQ96AT9 228 aa7□□□□□ -1.29
TPM3-213ENST00000368545 FLYWCH2Q96CP2 140 aaKnown RBP7□□□□□ -1.29
TPM3-213ENST00000368545 CLCC1Q96S66 551 aa7□□□□□ -1.29
TPM3-213ENST00000368545 QTRT1Q9BXR0 403 aaKnown RBP7□□□□□ -1.29
TPM3-213ENST00000368545 TMEM14BQ9NUH8 114 aa7□□□□□ -1.29
TPM3-213ENST00000368545 PRNDQ9UKY0 176 aa7□□□□□ -1.29
TPM3-213ENST00000368545 IFNA17P01571 189 aa7□□□□□ -1.29
TPM3-213ENST00000368545 ARG1P05089 322 aa7□□□□□ -1.29
TPM3-213ENST00000368545 HTR1DP28221 377 aa7□□□□□ -1.29
TPM3-213ENST00000368545 REG1BP48304 166 aa7□□□□□ -1.29
TPM3-213ENST00000368545 CAMLGP49069 296 aa7□□□□□ -1.29
TPM3-213ENST00000368545 OR2B8PP59922 312 aa7□□□□□ -1.29
TPM3-213ENST00000368545 LCN2P80188 198 aa7□□□□□ -1.29
TPM3-213ENST00000368545 PAX2Q02962 417 aa7□□□□□ -1.29
TPM3-213ENST00000368545 RPL7L1Q6DKI1 246 aaKnown RBP7□□□□□ -1.29
TPM3-213ENST00000368545 VKORC1L1Q8N0U8 176 aa7□□□□□ -1.29
TPM3-213ENST00000368545 OR1S2Q8NGQ3 325 aa7□□□□□ -1.29
TPM3-213ENST00000368545 RNASE8Q8TDE3 154 aaKnown RBP7□□□□□ -1.29
TPM3-213ENST00000368545 SIRT7Q9NRC8 400 aa7□□□□□ -1.29
TPM3-213ENST00000368545 FKBP11Q9NYL4 201 aa7□□□□□ -1.29
TPM3-213ENST00000368545 NUP50Q9UKX7 468 aa7□□□□□ -1.29
TPM3-213ENST00000368545 NBEAL1Q6ZS30 2694 aa7□□□□□ -1.29
TPM3-213ENST00000368545 RPS10-NUDT3A0A1W2PQS6 291 aa6.99□□□□□ -1.29
TPM3-213ENST00000368545 CEBPZOSA8MTT3 80 aa6.99□□□□□ -1.29
TPM3-213ENST00000368545 ODF3BA8MYP8 253 aa6.99□□□□□ -1.29
TPM3-213ENST00000368545 LEUTXA8MZ59 168 aa6.99□□□□□ -1.29
TPM3-213ENST00000368545 DFFBO76075 338 aa6.99□□□□□ -1.29
TPM3-213ENST00000368545 VMO1Q7Z5L0 202 aa6.99□□□□□ -1.29
TPM3-213ENST00000368545 PUSL1Q8N0Z8 303 aaKnown RBP6.99□□□□□ -1.29
TPM3-213ENST00000368545 OR5C1Q8NGR4 320 aa6.99□□□□□ -1.29
TPM3-213ENST00000368545 ATP5SQ99766 215 aa6.99□□□□□ -1.29
TPM3-213ENST00000368545 ZNF747Q9BV97 191 aa6.99□□□□□ -1.29
TPM3-213ENST00000368545 SMIM3Q9BZL3 60 aa6.99□□□□□ -1.29
TPM3-213ENST00000368545 AAMDCQ9H7C9 122 aa6.99□□□□□ -1.29
TPM3-213ENST00000368545 ZNF257Q9Y2Q1 563 aa6.99□□□□□ -1.29
TPM3-213ENST00000368545 INSIG2Q9Y5U4 225 aa6.99□□□□□ -1.29
TPM3-213ENST00000368545 CSMD1Q96PZ7 3565 aa6.99□□□□□ -1.29
TPM3-213ENST00000368545 TET2Q6N021 2002 aaPredicted RBP6.99□□□□□ -1.29
TPM3-213ENST00000368545 IGHV1-3A0A0C4DH29 117 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 OOSP1A8MZH6 123 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 H3BP45 60 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 LY6LH3BQJ8 138 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 UPK2O00526 184 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 KBTBD11O94819 623 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 SAA1P0DJI8 122 aaPredicted RBP6.98□□□□□ -1.29
TPM3-213ENST00000368545 USF1P22415 310 aaPredicted RBP6.98□□□□□ -1.29
TPM3-213ENST00000368545 LGALS7P47929 136 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 B2MP61769 119 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 DIAPH2-AS1Q14236 149 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 SPANXN5Q5MJ07 72 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 MINOS1Q5TGZ0 78 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 TMEM14EPQ6UXP3 125 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 OR5B3Q8NH48 314 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 GRAMD2BQ96HH9 432 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 TSNAXQ99598 290 aaKnown RBP6.98□□□□□ -1.29
TPM3-213ENST00000368545 SIRPDQ9H106 197 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 ARV1Q9H2C2 271 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 HIPK2Q9H2X6 1198 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 DPM3Q9P2X0 92 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 STRAPQ9Y3F4 350 aaKnown RBP6.98□□□□□ -1.29
TPM3-213ENST00000368545 MINOS1-NBL1R4GNA1 71 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 ARHGAP32A7KAX9 2087 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 AKAP6Q13023 2319 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 LINC00862A6NCI5 91 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 CST7O76096 145 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 DYNLT3P51808 116 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 DVL1P1P54792 670 aaPredicted RBP6.98□□□□□ -1.29
TPM3-213ENST00000368545 DLX1P56177 255 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 HSPE1P61604 102 aaKnown RBP6.98□□□□□ -1.29
TPM3-213ENST00000368545 TMEM267Q0VDI3 215 aaPredicted RBP6.98□□□□□ -1.29
TPM3-213ENST00000368545 VMA21Q3ZAQ7 101 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 TPTE2P1Q5T6R2 138 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 PDZD9Q8IXQ8 264 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 PINX1Q96BK5 328 aaKnown RBP6.98□□□□□ -1.29
TPM3-213ENST00000368545 RNF5Q99942 180 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 GINS3Q9BRX5 216 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 ENY2Q9NPA8 101 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 TCF19Q9Y242 345 aa6.98□□□□□ -1.29
TPM3-213ENST00000368545 SRRM4A7MD48 611 aaKnown RBP6.97□□□□□ -1.29
TPM3-213ENST00000368545 NMBP08949 121 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 SEC11BP0C7V7 166 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 METTL15P1P0C7V9 234 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 HOXA1P49639 335 aaPredicted RBP6.97□□□□□ -1.29
TPM3-213ENST00000368545 BLOC1S1P78537 153 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 CLINT1Q14677 625 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 HCP5Q6MZN7 132 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 MOB3BQ86TA1 216 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 TMEM167AQ8TBQ9 72 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 TMED6Q8WW62 240 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 TMEM18Q96B42 140 aa6.97□□□□□ -1.29
TPM3-213ENST00000368545 PARD6GQ9BYG4 376 aaPredicted RBP6.97□□□□□ -1.29
TPM3-213ENST00000368545 TBL2Q9Y4P3 447 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms