RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 COL6A5A8TX70 2615 aa10.75□□□□□ -0.69
TPM3-211ENST00000368531 I3L521 148 aa10.75□□□□□ -0.69
TPM3-211ENST00000368531 CCL24O00175 119 aa10.75□□□□□ -0.69
TPM3-211ENST00000368531 MBPP02686 304 aaPredicted RBP10.75□□□□□ -0.69
TPM3-211ENST00000368531 PF4P02776 101 aa10.75□□□□□ -0.69
TPM3-211ENST00000368531 LGALS1P09382 135 aaKnown RBP10.75□□□□□ -0.69
TPM3-211ENST00000368531 NPY1RP25929 384 aa10.75□□□□□ -0.69
TPM3-211ENST00000368531 S100A10P60903 97 aa10.75□□□□□ -0.69
TPM3-211ENST00000368531 OR11H1Q8NG94 326 aa10.75□□□□□ -0.69
TPM3-211ENST00000368531 OR4F17Q8NGA8 305 aa10.75□□□□□ -0.69
TPM3-211ENST00000368531 OR1L6Q8NGR2 347 aa10.75□□□□□ -0.69
TPM3-211ENST00000368531 OR1N2Q8NGR9 330 aa10.75□□□□□ -0.69
TPM3-211ENST00000368531 DPF1Q92782 380 aa10.75□□□□□ -0.69
TPM3-211ENST00000368531 WDR89Q96FK6 387 aaPredicted RBP10.75□□□□□ -0.69
TPM3-211ENST00000368531 RAX2Q96IS3 184 aa10.75□□□□□ -0.69
TPM3-211ENST00000368531 OR4F4Q96R69 305 aa10.75□□□□□ -0.69
TPM3-211ENST00000368531 MED28Q9H204 178 aa10.75□□□□□ -0.69
TPM3-211ENST00000368531 RCL1Q9Y2P8 373 aaKnown RBP10.75□□□□□ -0.69
TPM3-211ENST00000368531 IGHV4OR15-8A0A075B7B6 117 aa10.74□□□□□ -0.69
TPM3-211ENST00000368531 A0A087WW49 117 aa10.74□□□□□ -0.69
TPM3-211ENST00000368531 H3BP45 60 aa10.74□□□□□ -0.69
TPM3-211ENST00000368531 MT-CO2P00403 227 aa10.74□□□□□ -0.69
TPM3-211ENST00000368531 TRBV12-3P01733 135 aa10.74□□□□□ -0.69
TPM3-211ENST00000368531 FCN2Q15485 313 aa10.74□□□□□ -0.69
TPM3-211ENST00000368531 MLANAQ16655 118 aa10.74□□□□□ -0.69
TPM3-211ENST00000368531 SPANXN5Q5MJ07 72 aa10.74□□□□□ -0.69
TPM3-211ENST00000368531 ZNF343Q6P1L6 599 aa10.74□□□□□ -0.69
TPM3-211ENST00000368531 CLEC19AQ6UXS0 136 aa10.74□□□□□ -0.69
TPM3-211ENST00000368531 EEF1AKMT3Q96AZ1 226 aa10.74□□□□□ -0.69
TPM3-211ENST00000368531 ZC4H2Q9NQZ6 224 aa10.74□□□□□ -0.69
TPM3-211ENST00000368531 PSENENQ9NZ42 101 aa10.74□□□□□ -0.69
TPM3-211ENST00000368531 K7EIM0 57 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 K7EPK0 472 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 HSPB1P04792 205 aaKnown RBP10.73□□□□□ -0.69
TPM3-211ENST00000368531 IFNA4P05014 189 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 OPRK1P41145 380 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 H2BFSP57053 126 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 RAB32Q13637 225 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 KLK9Q2XQG4 91 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 BSXQ3C1V8 233 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 LRRC37A5PQ49AS3 106 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 C2orf83Q53S99 150 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 ETV3LQ6ZN32 361 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 UBAC2Q8NBM4 344 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 SCARB1Q8WTV0 552 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 TMEM170AQ8WVE7 144 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 CXorf58Q96LI9 332 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 CIB3Q96Q77 187 aaPredicted RBP10.73□□□□□ -0.69
TPM3-211ENST00000368531 PEF1Q9UBV8 284 aaKnown RBP10.73□□□□□ -0.69
TPM3-211ENST00000368531 KLK9Q9UKQ9 250 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 U3KQ87 197 aa10.73□□□□□ -0.69
TPM3-211ENST00000368531 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.72□□□□□ -0.69
TPM3-211ENST00000368531 C15orf62A8K5M9 175 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 PPP5D1E7EU14 171 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 I3L2K1 104 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 L7N2F9 121 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 OR8U8P0C7N1 319 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 CXCL3P19876 107 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 MYCNOSP40205 109 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 SLURP1P55000 103 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 VAMP2P63027 116 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 RUNX1Q01196 453 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 ZNF616Q08AN1 781 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 Q56UQ5 140 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 ACSM6Q6P461 480 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 NOXA1Q86UR1 476 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 OR11H7Q8NGC8 314 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 VN1R17PQ8TDU5 208 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 CCDC140Q96MF4 163 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 OR4C12Q96R67 309 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 RANGRFQ9HD47 186 aaPredicted RBP10.72□□□□□ -0.69
TPM3-211ENST00000368531 C21orf62Q9NYP8 219 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 PLA2G2EQ9NZK7 142 aa10.72□□□□□ -0.69
TPM3-211ENST00000368531 TRBV7-1A0A0A6YYK4 115 aa10.71□□□□□ -0.69
TPM3-211ENST00000368531 LINC01619G3V211 115 aa10.71□□□□□ -0.69
TPM3-211ENST00000368531 CORTO00230 105 aa10.71□□□□□ -0.69
TPM3-211ENST00000368531 TMEM50AO95807 157 aa10.71□□□□□ -0.69
TPM3-211ENST00000368531 CLEC3BP05452 202 aa10.71□□□□□ -0.69
TPM3-211ENST00000368531 GPR183P32249 361 aa10.71□□□□□ -0.69
TPM3-211ENST00000368531 BCAP31P51572 246 aa10.71□□□□□ -0.69
TPM3-211ENST00000368531 PAX9P55771 341 aa10.71□□□□□ -0.69
TPM3-211ENST00000368531 RRAS2P62070 204 aaPredicted RBP10.71□□□□□ -0.69
TPM3-211ENST00000368531 RAB11AP62491 216 aa10.71□□□□□ -0.69
TPM3-211ENST00000368531 RPP30P78346 268 aaKnown RBP10.71□□□□□ -0.69
TPM3-211ENST00000368531 CYCSP99999 105 aaKnown RBP10.71□□□□□ -0.69
TPM3-211ENST00000368531 IL15RAQ13261 267 aa10.71□□□□□ -0.69
TPM3-211ENST00000368531 ZNF502Q8TBZ5 544 aa10.71□□□□□ -0.69
TPM3-211ENST00000368531 SMIM8Q96KF7 97 aa10.71□□□□□ -0.69
TPM3-211ENST00000368531 RAB40CQ96S21 281 aa10.71□□□□□ -0.69
TPM3-211ENST00000368531 NMES1Q9C002 83 aa10.71□□□□□ -0.69
TPM3-211ENST00000368531 FNDC4Q9H6D8 234 aaPredicted RBP10.71□□□□□ -0.69
TPM3-211ENST00000368531 TENM1Q9UKZ4 2725 aa10.71□□□□□ -0.69
TPM3-211ENST00000368531 STRAPQ9Y3F4 350 aaKnown RBP10.71□□□□□ -0.69
TPM3-211ENST00000368531 STAB1Q9NY15 2570 aa10.7□□□□□ -0.7
TPM3-211ENST00000368531 OR2T8A6NH00 312 aa10.7□□□□□ -0.7
TPM3-211ENST00000368531 ARL3P36405 182 aa10.7□□□□□ -0.7
TPM3-211ENST00000368531 MFAP4P55083 255 aa10.7□□□□□ -0.7
TPM3-211ENST00000368531 PVRIGQ6DKI7 326 aa10.7□□□□□ -0.7
TPM3-211ENST00000368531 MRPL36Q9P0J6 103 aaKnown RBP10.7□□□□□ -0.7
TPM3-211ENST00000368531 IGHV3-35A0A0C4DH35 117 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms