RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 WT1-ASQ06250 92 aa11.18□□□□□ -0.62
SHC1-202ENST00000368445 ELOBQ15370 118 aa11.18□□□□□ -0.62
SHC1-202ENST00000368445 FAM103A1Q9BTL3 118 aaKnown RBP11.18□□□□□ -0.62
SHC1-202ENST00000368445 LOC105371242A0A075B767 164 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 GCHFRP30047 84 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 VWC2Q2TAL6 325 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 HLA-DRB5Q30154 266 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 TMEM177Q53S58 311 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 TMEM144Q7Z5S9 345 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 LINC00574Q9H8X3 128 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 SCO2A0A1W2PP80 73 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 C22orf46C9J442 243 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 FAM3BP58499 235 aaPredicted RBP11.17□□□□□ -0.62
SHC1-202ENST00000368445 RPL23P62829 140 aaKnown RBP11.17□□□□□ -0.62
SHC1-202ENST00000368445 SUMO1P63165 101 aaKnown RBP11.17□□□□□ -0.62
SHC1-202ENST00000368445 LCN2P80188 198 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 OR4X1Q8NH49 305 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 ZNF596Q8TC21 504 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 TUBA4BQ9H853 241 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 HTR1DP28221 377 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 GALR1P47211 349 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 FRZBQ92765 325 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 S4R3C0 116 aa11.17□□□□□ -0.62
SHC1-202ENST00000368445 IGHV1-3A0A0C4DH29 117 aa11.16□□□□□ -0.62
SHC1-202ENST00000368445 B4DEV8 164 aa11.16□□□□□ -0.62
SHC1-202ENST00000368445 TMEM250H0YL14 139 aa11.16□□□□□ -0.62
SHC1-202ENST00000368445 AREGP15514 252 aa11.16□□□□□ -0.62
SHC1-202ENST00000368445 CD69Q07108 199 aa11.16□□□□□ -0.62
SHC1-202ENST00000368445 POU2AF1Q16633 256 aa11.16□□□□□ -0.62
SHC1-202ENST00000368445 C12orf57Q99622 126 aa11.16□□□□□ -0.62
SHC1-202ENST00000368445 SSBP3Q9BWW4 388 aaPredicted RBP11.16□□□□□ -0.62
SHC1-202ENST00000368445 TRAV5A0A0B4J249 113 aa11.16□□□□□ -0.62
SHC1-202ENST00000368445 BUB1B-PAK6H3BSN5 160 aa11.16□□□□□ -0.62
SHC1-202ENST00000368445 TIMM23O14925 209 aa11.16□□□□□ -0.62
SHC1-202ENST00000368445 LGALS7P47929 136 aa11.16□□□□□ -0.62
SHC1-202ENST00000368445 ZNF90Q03938 601 aa11.16□□□□□ -0.62
SHC1-202ENST00000368445 CYP2G1PQ6ZSU1 146 aa11.16□□□□□ -0.62
SHC1-202ENST00000368445 KDF1Q8NAX2 398 aaPredicted RBP11.16□□□□□ -0.62
SHC1-202ENST00000368445 OR1B1Q8NGR6 318 aa11.16□□□□□ -0.62
SHC1-202ENST00000368445 ELOVL1Q9BW60 279 aa11.16□□□□□ -0.62
SHC1-202ENST00000368445 NDUFA4L2Q9NRX3 87 aa11.16□□□□□ -0.62
SHC1-202ENST00000368445 IGKV1OR2-108A0A075B7D4 117 aa11.15□□□□□ -0.62
SHC1-202ENST00000368445 F6UZH7 168 aa11.15□□□□□ -0.62
SHC1-202ENST00000368445 STAG3L2P0CL84 134 aa11.15□□□□□ -0.62
SHC1-202ENST00000368445 STAG3L3P0CL85 134 aa11.15□□□□□ -0.62
SHC1-202ENST00000368445 MMD2Q8IY49 270 aa11.15□□□□□ -0.62
SHC1-202ENST00000368445 TMEM167AQ8TBQ9 72 aa11.15□□□□□ -0.62
SHC1-202ENST00000368445 BLNKQ8WV28 456 aa11.15□□□□□ -0.62
SHC1-202ENST00000368445 GSX1Q9H4S2 264 aaPredicted RBP11.15□□□□□ -0.62
SHC1-202ENST00000368445 MDFIC2A0A1B0GVS7 189 aa11.15□□□□□ -0.62
SHC1-202ENST00000368445 A0A1W2PPI3 338 aa11.15□□□□□ -0.62
SHC1-202ENST00000368445 PPP5D1E7EU14 171 aa11.15□□□□□ -0.62
SHC1-202ENST00000368445 IGHV2-70P01814 119 aa11.15□□□□□ -0.62
SHC1-202ENST00000368445 MRPL41Q8IXM3 137 aaKnown RBP11.15□□□□□ -0.62
SHC1-202ENST00000368445 TECRQ9NZ01 308 aaKnown RBP11.15□□□□□ -0.62
SHC1-202ENST00000368445 SLC45A2Q9UMX9 530 aa11.15□□□□□ -0.62
SHC1-202ENST00000368445 H3BTX0 84 aa11.15□□□□□ -0.63
SHC1-202ENST00000368445 PDE6DO43924 150 aa11.15□□□□□ -0.63
SHC1-202ENST00000368445 RBP4P02753 201 aa11.15□□□□□ -0.63
SHC1-202ENST00000368445 MGST1P10620 155 aaKnown RBP11.15□□□□□ -0.63
SHC1-202ENST00000368445 SFTPCP11686 197 aa11.15□□□□□ -0.63
SHC1-202ENST00000368445 RPL29P47914 159 aaKnown RBP11.15□□□□□ -0.63
SHC1-202ENST00000368445 TAS2R45P59539 299 aa11.15□□□□□ -0.63
SHC1-202ENST00000368445 UBE2L3P68036 154 aaKnown RBP11.15□□□□□ -0.63
SHC1-202ENST00000368445 SSBP2P81877 361 aaPredicted RBP11.15□□□□□ -0.63
SHC1-202ENST00000368445 FBXL19-AS1Q494R0 122 aa11.15□□□□□ -0.63
SHC1-202ENST00000368445 SERTAD4Q9NUC0 356 aa11.15□□□□□ -0.63
SHC1-202ENST00000368445 FCN1O00602 326 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 TOX4O94842 621 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 C2orf83Q53S99 150 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 PPP1R27Q86WC6 154 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 SLC25A33Q9BSK2 321 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 AMMECR1Q9Y4X0 333 aaPredicted RBP11.14□□□□□ -0.63
SHC1-202ENST00000368445 LSM4Q9Y4Z0 139 aaKnown RBP11.14□□□□□ -0.63
SHC1-202ENST00000368445 ZNF462Q96JM2 2506 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 FLNCQ14315 2725 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 CREBBPQ92793 2442 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 CRYBB3P26998 211 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 S100A2P29034 98 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 C11orf42Q8N5U0 333 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 YTHDF2Q9Y5A9 579 aaKnown RBP11.14□□□□□ -0.63
SHC1-202ENST00000368445 USP9XQ93008 2570 aaPredicted RBP11.14□□□□□ -0.63
SHC1-202ENST00000368445 SPINK4O60575 86 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 CLN5O75503 358 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 PRB4P10163 310 aaPredicted RBP11.14□□□□□ -0.63
SHC1-202ENST00000368445 AARDQ4LEZ3 155 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 Q8N7P7 452 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 OR5AU1Q8NGC0 362 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 TMEM37Q8WXS4 190 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 ST6GALNAC6Q969X2 333 aa11.14□□□□□ -0.63
SHC1-202ENST00000368445 A0A087WWC5 75 aa11.13□□□□□ -0.63
SHC1-202ENST00000368445 PRSS46E5RG02 174 aa11.13□□□□□ -0.63
SHC1-202ENST00000368445 TNFRSF13BO14836 293 aaPredicted RBP11.13□□□□□ -0.63
SHC1-202ENST00000368445 NPPCP23582 126 aa11.13□□□□□ -0.63
SHC1-202ENST00000368445 DLX6P56179 175 aa11.13□□□□□ -0.63
SHC1-202ENST00000368445 ZNF841Q6ZN19 808 aa11.13□□□□□ -0.63
SHC1-202ENST00000368445 SGK494Q96LW2 274 aa11.13□□□□□ -0.63
SHC1-202ENST00000368445 FNDC4Q9H6D8 234 aaPredicted RBP11.13□□□□□ -0.63
SHC1-202ENST00000368445 DNAJC4Q9NNZ3 241 aa11.13□□□□□ -0.63
SHC1-202ENST00000368445 TNFRSF19Q9NS68 423 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms