RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 ARPC5O15511 151 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 ST8SIA3O43173 380 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 TSC22D2O75157 780 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 MFAP2P55001 183 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 SRPXP78539 464 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 EXOSC2Q13868 293 aaKnown RBP11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 KLK9Q2XQG4 91 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 LAMTOR1Q6IAA8 161 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 ZNF343Q6P1L6 599 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 C9orf62Q8N4C0 152 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 NECAP1Q8NC96 275 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 DPF1Q92782 380 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 GPR146Q96CH1 333 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 USMG5Q96IX5 58 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 FBXL7Q9UJT9 491 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 KLK9Q9UKQ9 250 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 HSPB1P04792 205 aaKnown RBP11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 DEFA4P12838 97 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 HSPE1P61604 102 aaKnown RBP11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 PRCDQ00LT1 54 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 ATP5G2Q06055 141 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 C15orf32Q32M92 178 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 ZNF429Q86V71 674 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 LRTM2Q8N967 370 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 IL22RA2Q969J5 263 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 NXPH3O95157 252 aa11.6□□□□□ -0.55
SMPDL3A-201ENST00000368440 IGHV3-23P01764 117 aa11.6□□□□□ -0.55
SMPDL3A-201ENST00000368440 OR8U8P0C7N1 319 aa11.6□□□□□ -0.55
SMPDL3A-201ENST00000368440 AP2S1P53680 142 aaPredicted RBP11.6□□□□□ -0.55
SMPDL3A-201ENST00000368440 CYCSP99999 105 aaKnown RBP11.6□□□□□ -0.55
SMPDL3A-201ENST00000368440 HSD17B13Q7Z5P4 300 aaPredicted RBP11.6□□□□□ -0.55
SMPDL3A-201ENST00000368440 DCUN1D4Q92564 292 aa11.6□□□□□ -0.55
SMPDL3A-201ENST00000368440 DLX4Q92988 240 aaPredicted RBP11.6□□□□□ -0.55
SMPDL3A-201ENST00000368440 RCC1LQ96I51 464 aaKnown RBP11.6□□□□□ -0.55
SMPDL3A-201ENST00000368440 NMES1Q9C002 83 aa11.6□□□□□ -0.55
SMPDL3A-201ENST00000368440 NOTCH1P46531 2555 aa11.6□□□□□ -0.55
SMPDL3A-201ENST00000368440 MPC2O95563 127 aa11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 RAB32Q13637 225 aa11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 BEAN1Q3B7T3 259 aa11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 ZBTB8BQ8NAP8 495 aaPredicted RBP11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 ASB13Q8WXK3 278 aa11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 MBD2Q9UBB5 411 aa11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 CACNG5Q9UF02 275 aa11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 LSM5Q9Y4Y9 91 aaKnown RBP11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 F11RQ9Y624 299 aaKnown RBP11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 MFSD2BA6NFX1 497 aa11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 FGL1Q08830 312 aa11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 LGALSLQ3ZCW2 172 aaPredicted RBP11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 C11orf87Q6NUJ2 197 aa11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 THAP6Q8TBB0 222 aa11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 CCDC140Q96MF4 163 aa11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 PEF1Q9UBV8 284 aaKnown RBP11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 TMED3Q9Y3Q3 217 aa11.59□□□□□ -0.55
SMPDL3A-201ENST00000368440 IFNA17P01571 189 aa11.58□□□□□ -0.56
SMPDL3A-201ENST00000368440 HIST1H1BP16401 226 aaKnown RBP11.58□□□□□ -0.56
SMPDL3A-201ENST00000368440 CXCL2P19875 107 aa11.58□□□□□ -0.56
SMPDL3A-201ENST00000368440 HOXD3P31249 432 aaPredicted RBP11.58□□□□□ -0.56
SMPDL3A-201ENST00000368440 NMSQ5H8A3 153 aa11.58□□□□□ -0.56
SMPDL3A-201ENST00000368440 ZNF546Q86UE3 836 aa11.58□□□□□ -0.56
SMPDL3A-201ENST00000368440 OR2C3Q8N628 320 aa11.58□□□□□ -0.56
SMPDL3A-201ENST00000368440 PLEKHA3Q9HB20 300 aa11.58□□□□□ -0.56
SMPDL3A-201ENST00000368440 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.57□□□□□ -0.56
SMPDL3A-201ENST00000368440 BMPR1BO00238 502 aa11.57□□□□□ -0.56
SMPDL3A-201ENST00000368440 AARDQ4LEZ3 155 aa11.57□□□□□ -0.56
SMPDL3A-201ENST00000368440 SLC25A24Q6NUK1 477 aa11.57□□□□□ -0.56
SMPDL3A-201ENST00000368440 OR5AC2Q9NZP5 309 aa11.57□□□□□ -0.56
SMPDL3A-201ENST00000368440 IGHV3-21A0A0B4J1V1 117 aa11.57□□□□□ -0.56
SMPDL3A-201ENST00000368440 PPP5D1E7EU14 171 aa11.57□□□□□ -0.56
SMPDL3A-201ENST00000368440 H0YIZ8 118 aa11.57□□□□□ -0.56
SMPDL3A-201ENST00000368440 L7N2F9 121 aa11.57□□□□□ -0.56
SMPDL3A-201ENST00000368440 OVOL1O14753 267 aa11.57□□□□□ -0.56
SMPDL3A-201ENST00000368440 DEFA6Q01524 100 aa11.57□□□□□ -0.56
SMPDL3A-201ENST00000368440 KPRPQ5T749 579 aaPredicted RBP11.57□□□□□ -0.56
SMPDL3A-201ENST00000368440 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.57□□□□□ -0.56
SMPDL3A-201ENST00000368440 MBPP02686 304 aaPredicted RBP11.56□□□□□ -0.56
SMPDL3A-201ENST00000368440 PRB2P02812 416 aaPredicted RBP11.56□□□□□ -0.56
SMPDL3A-201ENST00000368440 CLEC19AQ6UXS0 136 aa11.56□□□□□ -0.56
SMPDL3A-201ENST00000368440 RNF126Q9BV68 326 aa11.56□□□□□ -0.56
SMPDL3A-201ENST00000368440 MFFQ9GZY8 342 aa11.56□□□□□ -0.56
SMPDL3A-201ENST00000368440 NOTCH3Q9UM47 2321 aa11.56□□□□□ -0.56
SMPDL3A-201ENST00000368440 SEC14L6B5MCN3 397 aa11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 HOXA1P49639 335 aaPredicted RBP11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 IL15RAQ13261 267 aa11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 ZNF114Q8NC26 417 aa11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 OR1P1Q8NH06 330 aa11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 OR1S1Q8NH92 325 aa11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 EEF1AKMT3Q96AZ1 226 aa11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 MCRIP2Q9BUT9 160 aaKnown RBP11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 MAGT1Q9H0U3 335 aa11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 DUXBA0A1W2PPF3 345 aa11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 INS-IGF2F8WCM5 200 aa11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 K7EIM0 57 aa11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 ZP3P21754 424 aa11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 SPCS3P61009 180 aa11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 ERHP84090 104 aaKnown RBP11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 IFITM2Q01629 132 aa11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 SMCO1Q147U7 214 aa11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 OR52E5Q8NH55 327 aa11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 ZNF502Q8TBZ5 544 aa11.55□□□□□ -0.56
SMPDL3A-201ENST00000368440 ARL6Q9H0F7 186 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms