RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 LFNGQ8NES3 379 aa12.62□□□□□ -0.39
LMNA-203ENST00000368297 TAF15Q92804 592 aaKnown RBP eCLIP12.62□□□□□ -0.39
LMNA-203ENST00000368297 TMEM160Q9NX00 188 aa12.62□□□□□ -0.39
LMNA-203ENST00000368297 HLA-DRB1P01911 266 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 CX3CL1P78423 397 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 SSBP2P81877 361 aaPredicted RBP12.61□□□□□ -0.39
LMNA-203ENST00000368297 VWC2Q2TAL6 325 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 ZNF562Q6V9R5 426 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 ETV3LQ6ZN32 361 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 C16orf82Q7Z2V1 217 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 SSMEM1Q8WWF3 244 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 ARPC1AQ92747 370 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 NARS2Q96I59 477 aaKnown RBP12.61□□□□□ -0.39
LMNA-203ENST00000368297 FBXO7Q9Y3I1 522 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 FLNBO75369 2602 aaKnown RBP12.61□□□□□ -0.39
LMNA-203ENST00000368297 A0A1B0GW64 132 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 SH2D7A6NKC9 451 aaPredicted RBP12.61□□□□□ -0.39
LMNA-203ENST00000368297 HOXA3O43365 443 aaPredicted RBP12.61□□□□□ -0.39
LMNA-203ENST00000368297 IFNA4P05014 189 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 APELAP0DMC3 54 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 OR13C7P0DN81 318 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 SNCAP37840 140 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 C9orf152Q5JTZ5 239 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 RBMS3Q6XE24 437 aaKnown RBP12.61□□□□□ -0.39
LMNA-203ENST00000368297 ZNF709Q8N972 641 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 SLC24A4Q8NFF2 622 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 BPIFCQ8NFQ6 507 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 LINC00052Q96N35 136 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 PRDM13Q9H4Q3 707 aa12.61□□□□□ -0.39
LMNA-203ENST00000368297 TNCP24821 2201 aa12.6□□□□□ -0.39
LMNA-203ENST00000368297 C17orf112F2Z3M2 114 aa12.6□□□□□ -0.39
LMNA-203ENST00000368297 M0QZK8 103 aa12.6□□□□□ -0.39
LMNA-203ENST00000368297 H2AFB1P0C5Y9 115 aa12.6□□□□□ -0.39
LMNA-203ENST00000368297 NPY1RP25929 384 aa12.6□□□□□ -0.39
LMNA-203ENST00000368297 SCGB2A2Q13296 93 aa12.6□□□□□ -0.39
LMNA-203ENST00000368297 CENPVQ7Z7K6 275 aaPredicted RBP12.6□□□□□ -0.39
LMNA-203ENST00000368297 FAM103A1Q9BTL3 118 aaKnown RBP12.6□□□□□ -0.39
LMNA-203ENST00000368297 RSG1Q9BU20 258 aa12.6□□□□□ -0.39
LMNA-203ENST00000368297 TREM1Q9NP99 234 aa12.6□□□□□ -0.39
LMNA-203ENST00000368297 OTOGQ6ZRI0 2925 aa12.59□□□□□ -0.39
LMNA-203ENST00000368297 IGHV7-81A0A0B4J1V7 117 aa12.59□□□□□ -0.39
LMNA-203ENST00000368297 TEX22C9J3V5 150 aa12.59□□□□□ -0.39
LMNA-203ENST00000368297 HBE1P02100 147 aa12.59□□□□□ -0.39
LMNA-203ENST00000368297 REG1AP05451 166 aa12.59□□□□□ -0.39
LMNA-203ENST00000368297 FGF7P21781 194 aa12.59□□□□□ -0.39
LMNA-203ENST00000368297 FHITP49789 147 aa12.59□□□□□ -0.39
LMNA-203ENST00000368297 DLK1P80370 383 aa12.59□□□□□ -0.39
LMNA-203ENST00000368297 WT1-ASQ06250 92 aa12.59□□□□□ -0.39
LMNA-203ENST00000368297 SUN5Q8TC36 379 aa12.59□□□□□ -0.39
LMNA-203ENST00000368297 HSPB9Q9BQS6 159 aa12.59□□□□□ -0.39
LMNA-203ENST00000368297 PBDC1Q9BVG4 233 aa12.59□□□□□ -0.39
LMNA-203ENST00000368297 VPREB3Q9UKI3 123 aa12.59□□□□□ -0.39
LMNA-203ENST00000368297 ACANP16112 2415 aa12.59□□□□□ -0.39
LMNA-203ENST00000368297 IGLC7A0M8Q6 106 aa12.58□□□□□ -0.4
LMNA-203ENST00000368297 INS-IGF2F8WCM5 200 aa12.58□□□□□ -0.4
LMNA-203ENST00000368297 SOX15O60248 233 aa12.58□□□□□ -0.4
LMNA-203ENST00000368297 MPDU1O75352 247 aa12.58□□□□□ -0.4
LMNA-203ENST00000368297 MBP02144 154 aa12.58□□□□□ -0.4
LMNA-203ENST00000368297 AREGP15514 252 aa12.58□□□□□ -0.4
LMNA-203ENST00000368297 PEA15Q15121 130 aa12.58□□□□□ -0.4
LMNA-203ENST00000368297 Q71RC1 249 aaPredicted RBP12.58□□□□□ -0.4
LMNA-203ENST00000368297 RFNGQ9Y644 331 aa12.58□□□□□ -0.4
LMNA-203ENST00000368297 CELSR1Q9NYQ6 3014 aa12.58□□□□□ -0.4
LMNA-203ENST00000368297 TMEM218A2RU14 115 aa12.57□□□□□ -0.4
LMNA-203ENST00000368297 AGPAT2O15120 278 aa12.57□□□□□ -0.4
LMNA-203ENST00000368297 AMY1AP04745 511 aa12.57□□□□□ -0.4
LMNA-203ENST00000368297 RNASE2P10153 161 aaKnown RBP12.57□□□□□ -0.4
LMNA-203ENST00000368297 SRD5A1P18405 259 aa12.57□□□□□ -0.4
LMNA-203ENST00000368297 SUB1P53999 127 aaKnown RBP eCLIP12.57□□□□□ -0.4
LMNA-203ENST00000368297 NDPQ00604 133 aa12.57□□□□□ -0.4
LMNA-203ENST00000368297 TMEM41BQ5BJD5 291 aa12.57□□□□□ -0.4
LMNA-203ENST00000368297 SRSF8Q9BRL6 282 aaKnown RBP12.57□□□□□ -0.4
LMNA-203ENST00000368297 CDC42EP3Q9UKI2 254 aa12.57□□□□□ -0.4
LMNA-203ENST00000368297 PLXNB1O43157 2135 aa12.57□□□□□ -0.4
LMNA-203ENST00000368297 TUSC1Q2TAM9 212 aa12.57□□□□□ -0.4
LMNA-203ENST00000368297 GSX1Q9H4S2 264 aaPredicted RBP12.57□□□□□ -0.4
LMNA-203ENST00000368297 WDR83OSQ9Y284 106 aa12.57□□□□□ -0.4
LMNA-203ENST00000368297 TLN2Q9Y4G6 2542 aa12.56□□□□□ -0.4
LMNA-203ENST00000368297 ZNF469Q96JG9 3925 aaPredicted RBP12.56□□□□□ -0.4
LMNA-203ENST00000368297 SMCO3A2RU48 225 aa12.56□□□□□ -0.4
LMNA-203ENST00000368297 C2orf83Q53S99 150 aa12.56□□□□□ -0.4
LMNA-203ENST00000368297 TMEM170AQ8WVE7 144 aa12.56□□□□□ -0.4
LMNA-203ENST00000368297 DUX5Q96PT3 197 aa12.56□□□□□ -0.4
LMNA-203ENST00000368297 P2RX4Q99571 388 aa12.56□□□□□ -0.4
LMNA-203ENST00000368297 NPCDR1Q9BY65 106 aa12.56□□□□□ -0.4
LMNA-203ENST00000368297 CYSRT1A8MQ03 144 aa12.55□□□□□ -0.4
LMNA-203ENST00000368297 FNDC10F2Z333 226 aa12.55□□□□□ -0.4
LMNA-203ENST00000368297 ATP6V0E1O15342 81 aa12.55□□□□□ -0.4
LMNA-203ENST00000368297 CD5P06127 495 aa12.55□□□□□ -0.4
LMNA-203ENST00000368297 MDKP21741 143 aaPredicted RBP12.55□□□□□ -0.4
LMNA-203ENST00000368297 AKR1C1Q04828 323 aa12.55□□□□□ -0.4
LMNA-203ENST00000368297 GUK1Q16774 197 aa12.55□□□□□ -0.4
LMNA-203ENST00000368297 ECSCRQ19T08 205 aa12.55□□□□□ -0.4
LMNA-203ENST00000368297 BSXQ3C1V8 233 aa12.55□□□□□ -0.4
LMNA-203ENST00000368297 SFT2D1Q8WV19 159 aa12.55□□□□□ -0.4
LMNA-203ENST00000368297 EIF5A2Q9GZV4 153 aaKnown RBP12.55□□□□□ -0.4
LMNA-203ENST00000368297 NPVFQ9HCQ7 196 aa12.55□□□□□ -0.4
LMNA-203ENST00000368297 KCNIP2Q9NS61 270 aa12.55□□□□□ -0.4
LMNA-203ENST00000368297 RPRMQ9NS64 109 aa12.55□□□□□ -0.4
LMNA-203ENST00000368297 TRAV1-1A0A0B4J248 108 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms