RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 PLEKHA3Q9HB20 300 aa7.49□□□□□ -1.21
CD48-202ENST00000368046 C21orf62Q9NYP8 219 aa7.49□□□□□ -1.21
CD48-202ENST00000368046 SMAD5-AS1Q9Y6J3 95 aa7.49□□□□□ -1.21
CD48-202ENST00000368046 PRKDCP78527 4128 aaKnown RBP7.49□□□□□ -1.21
CD48-202ENST00000368046 DNAH3Q8TD57 4116 aa7.49□□□□□ -1.21
CD48-202ENST00000368046 ELOA3CA0A087WX78 387 aaPredicted RBP7.48□□□□□ -1.21
CD48-202ENST00000368046 ZNF320A2RRD8 509 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 K7EIM0 57 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 TGOLN2O43493 480 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 ANXA3P12429 323 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 FOLR2P14207 255 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 CBLN1P23435 193 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 GPR183P32249 361 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 SUB1P53999 127 aaKnown RBP eCLIP7.48□□□□□ -1.21
CD48-202ENST00000368046 SUPT4H1P63272 117 aaKnown RBP7.48□□□□□ -1.21
CD48-202ENST00000368046 CD69Q07108 199 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 BAK1Q16611 211 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 AARDQ4LEZ3 155 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 TMEM128Q5BJH2 165 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 TMEM268Q5VZI3 342 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 ZNF57Q68EA5 555 aaPredicted RBP7.48□□□□□ -1.21
CD48-202ENST00000368046 SPSB3Q6PJ21 355 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 ADAMTSL5Q6ZMM2 481 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 SLC35G3Q8N808 338 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 OR2K2Q8NGT1 345 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 OR52E5Q8NH55 327 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 BSCL2Q96G97 398 aaPredicted RBP7.48□□□□□ -1.21
CD48-202ENST00000368046 TXN2Q99757 166 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 PALMDQ9NP74 551 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 GAR1Q9NY12 217 aaKnown RBP7.48□□□□□ -1.21
CD48-202ENST00000368046 CACFD1Q9UGQ2 172 aa7.48□□□□□ -1.21
CD48-202ENST00000368046 IGHV3-21A0A0B4J1V1 117 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 PIGBOS1A0A0B4J2F0 54 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 NAP1L6A6NFF2 107 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 OR2T8A6NH00 312 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 C2orf70A6NJV1 201 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 I3L2K1 104 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 CTSGP08311 255 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 NHLRC4P0CG21 123 aaPredicted RBP7.47□□□□□ -1.21
CD48-202ENST00000368046 FCGR2BP31994 310 aaPredicted RBP7.47□□□□□ -1.21
CD48-202ENST00000368046 INPP1P49441 399 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 MFAP4P55083 255 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 ELLP55199 621 aaPredicted RBP7.47□□□□□ -1.21
CD48-202ENST00000368046 SPCS3P61009 180 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 DEFB114Q30KQ6 69 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 SPINK9Q5DT21 86 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 PVRIGQ6DKI7 326 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 LCN12Q6JVE5 192 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 HAPLN4Q86UW8 402 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 LGI3Q8N145 548 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 Q8N1Y9 231 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 MISP3Q96FF7 219 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 KRTAP4-9Q9BYQ8 210 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 ZNF436Q9C0F3 470 aaPredicted RBP7.47□□□□□ -1.21
CD48-202ENST00000368046 ENY2Q9NPA8 101 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 ZC4H2Q9NQZ6 224 aa7.47□□□□□ -1.21
CD48-202ENST00000368046 TECRQ9NZ01 308 aaKnown RBP7.47□□□□□ -1.21
CD48-202ENST00000368046 A0A0B4J2A0 478 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 ZNF785A8K8V0 405 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 A8MWP6 167 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 F8W735 103 aaPredicted RBP7.46□□□□□ -1.22
CD48-202ENST00000368046 MT-CO2P00403 227 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 C8orf88P0DMB2 117 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 SRPXP78539 464 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 TM4SF20Q53R12 229 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 Q56UQ5 140 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 TRIQKQ629K1 86 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 LYZL2Q7Z4W2 148 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 TMED4Q7Z7H5 227 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 UBAC2Q8NBM4 344 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 UXS1Q8NBZ7 420 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 MARC2Q969Z3 335 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 SDHCQ99643 169 aaPredicted RBP7.46□□□□□ -1.22
CD48-202ENST00000368046 CHRDL1Q9BU40 450 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 MRPL27Q9P0M9 148 aaKnown RBP7.46□□□□□ -1.22
CD48-202ENST00000368046 CACNG5Q9UF02 275 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 SHPKQ9UHJ6 478 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 UFC1Q9Y3C8 167 aa7.46□□□□□ -1.22
CD48-202ENST00000368046 IGHV3-35A0A0C4DH35 117 aa7.45□□□□□ -1.22
CD48-202ENST00000368046 TMEM213A2RRL7 107 aa7.45□□□□□ -1.22
CD48-202ENST00000368046 IZUMO1RA6ND01 250 aa7.45□□□□□ -1.22
CD48-202ENST00000368046 CENPXA8MT69 81 aa7.45□□□□□ -1.22
CD48-202ENST00000368046 K7EMT4 169 aa7.45□□□□□ -1.22
CD48-202ENST00000368046 CORTO00230 105 aa7.45□□□□□ -1.22
CD48-202ENST00000368046 NDUFA4O00483 81 aa7.45□□□□□ -1.22
CD48-202ENST00000368046 NUPL2O15504 423 aaKnown RBP7.45□□□□□ -1.22
CD48-202ENST00000368046 H2AFB1P0C5Y9 115 aa7.45□□□□□ -1.22
CD48-202ENST00000368046 H2AFB2P0C5Z0 115 aa7.45□□□□□ -1.22
CD48-202ENST00000368046 SULT1A3P0DMM9 295 aa7.45□□□□□ -1.22
CD48-202ENST00000368046 SULT1A4P0DMN0 295 aa7.45□□□□□ -1.22
CD48-202ENST00000368046 RNASE2P10153 161 aaKnown RBP7.45□□□□□ -1.22
CD48-202ENST00000368046 ADMP35318 185 aa7.45□□□□□ -1.22
CD48-202ENST00000368046 HTR2BP41595 481 aa7.45□□□□□ -1.22
CD48-202ENST00000368046 HOXA1P49639 335 aaPredicted RBP7.45□□□□□ -1.22
CD48-202ENST00000368046 CCR6P51684 374 aa7.45□□□□□ -1.22
CD48-202ENST00000368046 RBMS2Q15434 407 aaKnown RBP7.45□□□□□ -1.22
CD48-202ENST00000368046 BSXQ3C1V8 233 aa7.45□□□□□ -1.22
CD48-202ENST00000368046 CD300EQ496F6 205 aaPredicted RBP7.45□□□□□ -1.22
CD48-202ENST00000368046 UNQ9165/PRO28630Q6UXU0 137 aa7.45□□□□□ -1.22
CD48-202ENST00000368046 LINC00299Q6ZSB3 139 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms