RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ZNF114Q8NC26 417 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 OR4A16Q8NH70 328 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 OCC1Q8TAD7 63 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 EAF1Q96JC9 268 aaPredicted RBP9.44□□□□□ -0.9
USF1-201ENST00000368019 OR2J1Q9GZK6 312 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 MRPL18Q9H0U6 180 aaKnown RBP9.44□□□□□ -0.9
USF1-201ENST00000368019 TMEM167BQ9NRX6 74 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 DCAF16Q9NXF7 216 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 PROCRQ9UNN8 238 aa9.44□□□□□ -0.9
USF1-201ENST00000368019 TRAV38-1A0A0B4J264 116 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.43□□□□□ -0.9
USF1-201ENST00000368019 F2RL2O00254 374 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 CRYAAP02489 173 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 OR5G3P0C626 314 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 GPR12P47775 334 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 EDDM3BP56851 147 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 LINC00310P59036 64 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 RELBQ01201 579 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 CLEC12BQ2HXU8 276 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 TMEM30BQ3MIR4 351 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 PRAMEF5Q5TYX0 476 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 PRAMEF6Q5VXH4 476 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 Q6ZWC4 215 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 MYPOPQ86VE0 399 aaPredicted RBP9.43□□□□□ -0.9
USF1-201ENST00000368019 SLC35E1Q96K37 410 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 RNF2Q99496 336 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 VAMP8Q9BV40 100 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 MS4A5Q9H3V2 200 aa9.43□□□□□ -0.9
USF1-201ENST00000368019 SCO2A0A1W2PP80 73 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 INAFM1C9JVW0 142 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 NUPR1O60356 82 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 PLAUP00749 431 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 HLA-DQA1P01909 254 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 IL6RP08887 468 aaPredicted RBP9.42□□□□□ -0.9
USF1-201ENST00000368019 BRS3P32247 399 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 CFHR2P36980 270 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 GABRA2P47869 451 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 RAB7AP51149 207 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 UBE2G2P60604 165 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 RPL31P62899 125 aaKnown RBP9.42□□□□□ -0.9
USF1-201ENST00000368019 PRR20EP86478 221 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 PRR20CP86479 221 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 PRR20DP86480 221 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 PRR20BP86481 221 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 PRR20AP86496 221 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 KRTAP1-1Q07627 177 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 PSG7Q13046 419 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 TEPPQ6URK8 271 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 WDR82Q6UXN9 313 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 OR1L6Q8NGR2 347 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 MRGPRDQ8TDS7 321 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 ADTRPQ96IZ2 230 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 DERL1Q9BUN8 251 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 OBP2BQ9NPH6 170 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 HEYLQ9NQ87 328 aaPredicted RBP9.42□□□□□ -0.9
USF1-201ENST00000368019 ZNF586Q9NXT0 402 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 SLC45A2Q9UMX9 530 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 TCF19Q9Y242 345 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 FOXA2Q9Y261 457 aaPredicted RBP9.42□□□□□ -0.9
USF1-201ENST00000368019 V9GYV3 84 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 PLCE1Q9P212 2302 aa9.42□□□□□ -0.9
USF1-201ENST00000368019 C15orf61A6NNL5 157 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 SERF1AO75920 110 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 GRPP07492 148 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 ZNF25P17030 456 aaPredicted RBP9.41□□□□□ -0.9
USF1-201ENST00000368019 CX3CL1P78423 397 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 AESQ08117 197 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 EFNB3Q15768 340 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 PRSS8Q16651 343 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 MORN2Q502X0 79 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 MIC13Q5XKP0 118 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 ZNF705AQ6ZN79 300 aaPredicted RBP9.41□□□□□ -0.9
USF1-201ENST00000368019 PQLC2Q6ZP29 291 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 C19orf35Q6ZS72 473 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 MMD2Q8IY49 270 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 GCSAMQ8N6F7 178 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 OR5T1Q8NG75 326 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 OR13A1Q8NGR1 328 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 OR4S2Q8NH73 311 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 UBALD1Q8TB05 177 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 KLF14Q8TD94 323 aaPredicted RBP9.41□□□□□ -0.9
USF1-201ENST00000368019 DDB2Q92466 427 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 NEUROG1Q92886 237 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 COMMD5Q9GZQ3 224 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 PSG11Q9UQ72 335 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 GOLT1BQ9Y3E0 138 aa9.41□□□□□ -0.9
USF1-201ENST00000368019 YTHDF2Q9Y5A9 579 aaKnown RBP9.41□□□□□ -0.9
USF1-201ENST00000368019 C20orf202A1L168 122 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 ISLRO14498 428 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 MGST3O14880 152 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 IGKV3-15P01624 115 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 GPX1P07203 203 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 EGR1P18146 543 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 NPY1RP25929 384 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 THBS3P49746 956 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 COMPP49747 757 aaPredicted RBP9.4□□□□□ -0.9
USF1-201ENST00000368019 HSPE1P61604 102 aaKnown RBP9.4□□□□□ -0.9
USF1-201ENST00000368019 HLA-DRB5Q30154 266 aa9.4□□□□□ -0.9
USF1-201ENST00000368019 MBNL2Q5VZF2 373 aaKnown RBP9.4□□□□□ -0.9
USF1-201ENST00000368019 FAM169BQ8N8A8 192 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms