RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 CD69Q07108 199 aa7.57□□□□□ -1.2
SYNE1-205ENST00000367251 PSG7Q13046 419 aa7.57□□□□□ -1.2
SYNE1-205ENST00000367251 TRBV6-6A0A0A6YYG2 114 aa7.57□□□□□ -1.2
SYNE1-205ENST00000367251 SAP30O75446 220 aa7.57□□□□□ -1.2
SYNE1-205ENST00000367251 IGHV3-11P01762 117 aa7.57□□□□□ -1.2
SYNE1-205ENST00000367251 Q6ZS49 121 aa7.57□□□□□ -1.2
SYNE1-205ENST00000367251 NEU4Q8WWR8 484 aaPredicted RBP7.57□□□□□ -1.2
SYNE1-205ENST00000367251 NABP1Q96AH0 204 aa7.57□□□□□ -1.2
SYNE1-205ENST00000367251 PGLYRP4Q96LB8 373 aa7.57□□□□□ -1.2
SYNE1-205ENST00000367251 A0A087WX48 190 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 GDF9O60383 454 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 NPIPB3Q92617 1050 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 SSBP3Q9BWW4 388 aaPredicted RBP7.56□□□□□ -1.2
SYNE1-205ENST00000367251 CRIM1Q9NZV1 1036 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 ARID1AO14497 2285 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 A0A0G2JMM0 328 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 TRBV7-9A0A0J9YWB2 115 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 A0A1W2PPB8 328 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 A0A1W2PRS3 328 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 KIR3DP1A8MWS1 328 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 CELA3AP09093 270 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 RPL39P5Q59GN2 51 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 FOXL2NBQ6ZUU3 175 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 TMEM144Q7Z5S9 345 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 C1QL4Q86Z23 238 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 TTC9CQ8N5M4 171 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 PLPPR1Q8TBJ4 325 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 TMEM170AQ8WVE7 144 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 WNT10AQ9GZT5 417 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 TFF3Q07654 80 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 CYTL1Q9NRR1 136 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 UBE2CO00762 179 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 LINC00305Q7Z4B0 112 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 LURAP1LQ8IV03 231 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 FAM57AQ8TBR7 257 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 TMEM106BQ9NUM4 274 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 CEACAM8P31997 349 aaPredicted RBP7.56□□□□□ -1.2
SYNE1-205ENST00000367251 ATRAIDQ6UW56 229 aa7.56□□□□□ -1.2
SYNE1-205ENST00000367251 PHLDA1Q8WV24 401 aaPredicted RBP7.56□□□□□ -1.2
SYNE1-205ENST00000367251 ZNF837Q96EG3 531 aaPredicted RBP7.56□□□□□ -1.2
SYNE1-205ENST00000367251 MYOFQ9NZM1 2061 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 IGHV3-66A0A0C4DH42 116 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 IZUMO1RA6ND01 250 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 QRFPP83859 136 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 JOSD1Q15040 202 aaPredicted RBP7.55□□□□□ -1.2
SYNE1-205ENST00000367251 TBR1Q16650 682 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 ZIC4Q8N9L1 334 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 C15orf61A6NNL5 157 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 UPK2O00526 184 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 CNTFRP26992 372 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 RPL23P62829 140 aaKnown RBP7.55□□□□□ -1.2
SYNE1-205ENST00000367251 ACSF3Q4G176 576 aaPredicted RBP7.55□□□□□ -1.2
SYNE1-205ENST00000367251 BEND2Q8NDZ0 799 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 REG4Q9BYZ8 158 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 ZNF319Q9P2F9 582 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 TRAV24A0A0B4J272 114 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 PEX7O00628 323 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 FDCSPQ8NFU4 85 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 SRSF12Q8WXF0 261 aaKnown RBP7.55□□□□□ -1.2
SYNE1-205ENST00000367251 C2orf88Q9BSF0 95 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 PARD6GQ9BYG4 376 aaPredicted RBP7.55□□□□□ -1.2
SYNE1-205ENST00000367251 SEPSECSQ9HD40 501 aaKnown RBP7.55□□□□□ -1.2
SYNE1-205ENST00000367251 LDLRAD2Q5SZI1 272 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 VKORC1L1Q8N0U8 176 aa7.55□□□□□ -1.2
SYNE1-205ENST00000367251 IGKV1D-13A0A0B4J2D9 117 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 IGKV1-13P0DP09 117 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 SRD5A1P18405 259 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 CCL20P78556 96 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 MBNL2Q5VZF2 373 aaKnown RBP7.54□□□□□ -1.2
SYNE1-205ENST00000367251 TMEM42Q69YG0 159 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 KCNS1Q96KK3 526 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 PNRC2Q9NPJ4 139 aaKnown RBP7.54□□□□□ -1.2
SYNE1-205ENST00000367251 GSN-AS1Q9NRJ2 163 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 CABIN1Q9Y6J0 2220 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 RBMY1BA6NDE4 496 aaKnown RBP7.54□□□□□ -1.2
SYNE1-205ENST00000367251 RBMY1EA6NEQ0 496 aaKnown RBP7.54□□□□□ -1.2
SYNE1-205ENST00000367251 RBMY1DP0C7P1 496 aaKnown RBP7.54□□□□□ -1.2
SYNE1-205ENST00000367251 RBMY1A1P0DJD3 496 aaKnown RBP7.54□□□□□ -1.2
SYNE1-205ENST00000367251 RBMY1CP0DJD4 496 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 MYOD1P15172 320 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 ZNRF1Q8ND25 227 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 EFNA2O43921 213 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 FABP2P12104 132 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 ATG2BQ96BY7 2078 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 A0A087WV48 116 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 NBEAP1P0C6P0 100 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 IGFBP2P18065 325 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 TDGF1P3P51864 188 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 WFDC1Q9HC57 220 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 OSTCQ9NRP0 149 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 FOXI3A8MTJ6 420 aaPredicted RBP7.54□□□□□ -1.2
SYNE1-205ENST00000367251 ZNHIT1O43257 154 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 IGHV3-23P01764 117 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 REG1AP05451 166 aa7.54□□□□□ -1.2
SYNE1-205ENST00000367251 DOCK6Q96HP0 2047 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 A0A1W2PRE2 83 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 DPRXA6NFQ7 191 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 RRHO14718 337 aa7.53□□□□□ -1.2
SYNE1-205ENST00000367251 RPL32P62910 135 aaKnown RBP7.53□□□□□ -1.2
SYNE1-205ENST00000367251 MORN2Q502X0 79 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms