RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 MIEN1Q9BRT3 115 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 PSPNO60542 156 aa9.61□□□□□ -0.87
SYNE1-204ENST00000367248 RHOGP84095 191 aa9.61□□□□□ -0.87
SYNE1-204ENST00000367248 HEPN1Q6WQI6 88 aa9.61□□□□□ -0.87
SYNE1-204ENST00000367248 TMEM191AQ9H0A3 160 aa9.61□□□□□ -0.87
SYNE1-204ENST00000367248 NPIPB6E9PJ23 425 aa9.61□□□□□ -0.87
SYNE1-204ENST00000367248 LINC01356Q8N9X3 169 aa9.61□□□□□ -0.87
SYNE1-204ENST00000367248 ATG101Q9BSB4 218 aa9.61□□□□□ -0.87
SYNE1-204ENST00000367248 TMEM178BH3BS89 294 aa9.61□□□□□ -0.87
SYNE1-204ENST00000367248 FHITP49789 147 aa9.61□□□□□ -0.87
SYNE1-204ENST00000367248 NAT1P18440 290 aa9.61□□□□□ -0.87
SYNE1-204ENST00000367248 RNASE4P34096 147 aaKnown RBP9.61□□□□□ -0.87
SYNE1-204ENST00000367248 ICAM4Q14773 271 aa9.61□□□□□ -0.87
SYNE1-204ENST00000367248 ZNF502Q8TBZ5 544 aa9.61□□□□□ -0.87
SYNE1-204ENST00000367248 A0A0A6YYD4 124 aa9.61□□□□□ -0.87
SYNE1-204ENST00000367248 AREGP15514 252 aa9.61□□□□□ -0.87
SYNE1-204ENST00000367248 GATA2P23769 480 aaPredicted RBP9.61□□□□□ -0.87
SYNE1-204ENST00000367248 DUTP33316 252 aaKnown RBP9.61□□□□□ -0.87
SYNE1-204ENST00000367248 LCNL1Q6ZST4 164 aa9.61□□□□□ -0.87
SYNE1-204ENST00000367248 APCSP02743 223 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 MT-ND6P03923 174 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 IGFBP2P18065 325 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 ADIPOQQ15848 244 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 LHFPL4Q7Z7J7 247 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 KLHL30-AS1Q8NEE0 82 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 RCC1LQ96I51 464 aaKnown RBP9.6□□□□□ -0.87
SYNE1-204ENST00000367248 M0R381 172 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 AP4M1O00189 453 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 HERPUD1Q15011 391 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 RNASEH2CQ8TDP1 164 aaKnown RBP9.6□□□□□ -0.87
SYNE1-204ENST00000367248 A6NNC1 897 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 CCKARP32238 428 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 C12orf57Q99622 126 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 CDC42EP3Q9UKI2 254 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 ACACBO00763 2458 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 ELOBQ15370 118 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 MYOZ3Q8TDC0 251 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.6□□□□□ -0.87
SYNE1-204ENST00000367248 TMEM177Q53S58 311 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 C2orf83Q53S99 150 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 ZNF324BQ6AW86 544 aaPredicted RBP9.6□□□□□ -0.87
SYNE1-204ENST00000367248 PGLYRP4Q96LB8 373 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 F8VVB4 439 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 F8VWA3 439 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 EIF4E3Q8N5X7 224 aaKnown RBP9.6□□□□□ -0.87
SYNE1-204ENST00000367248 TEX45Q8NA69 505 aa9.6□□□□□ -0.87
SYNE1-204ENST00000367248 ANKRD36A6QL64 1941 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 DLX1P56177 255 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 RPS20P60866 119 aaKnown RBP9.59□□□□□ -0.87
SYNE1-204ENST00000367248 MED13LQ71F56 2210 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 K7EM74 188 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 NBEAP1P0C6P0 100 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 HNRNPA3P51991 378 aaKnown RBP9.59□□□□□ -0.87
SYNE1-204ENST00000367248 TMEM97Q5BJF2 176 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 CLDND2Q8NHS1 167 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 E7EQL1 145 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 MPZP25189 248 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 FHL1Q13642 323 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 CD177Q8N6Q3 437 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 GPR82Q96P67 336 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 TICRRQ7Z2Z1 1910 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 C15orf61A6NNL5 157 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 FAM3BP58499 235 aaPredicted RBP9.59□□□□□ -0.87
SYNE1-204ENST00000367248 ARL6IP6Q8N6S5 226 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 PROK2Q9HC23 129 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 TMEM250H0YL14 139 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 PSMB2P49721 201 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 SAPCD1Q5SSQ6 148 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 TMEM144Q7Z5S9 345 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 MOB4Q9Y3A3 225 aa9.59□□□□□ -0.87
SYNE1-204ENST00000367248 MLNRO43193 412 aa9.59□□□□□ -0.88
SYNE1-204ENST00000367248 RELBQ01201 579 aa9.59□□□□□ -0.88
SYNE1-204ENST00000367248 PUSL1Q8N0Z8 303 aaKnown RBP9.59□□□□□ -0.88
SYNE1-204ENST00000367248 OR1N2Q8NGR9 330 aa9.59□□□□□ -0.88
SYNE1-204ENST00000367248 DOCK4Q8N1I0 1966 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 PRSS8Q16651 343 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 M0R3E3 92 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 LDLRAD4O15165 306 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 NAPSAO96009 420 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 EGR1P18146 543 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 ZNF415Q09FC8 603 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 LEMD1Q68G75 181 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 ZNF407Q9C0G0 2248 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 IGHV1-8P0DP01 117 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 GPX4P36969 197 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-204ENST00000367248 HGFACQ04756 655 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 BTCP35070 178 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 ERVK11-1P61568 191 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 CR1LQ2VPA4 569 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 LILRA1O75019 489 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 SLC25A16P16260 332 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 MDKP21741 143 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-204ENST00000367248 CEACAM8P31997 349 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-204ENST00000367248 TFF3Q07654 80 aa9.58□□□□□ -0.88
SYNE1-204ENST00000367248 IGHV2-26A0A0B4J1V2 119 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 NPFFO15130 113 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 RPL29P47914 159 aaKnown RBP9.57□□□□□ -0.88
SYNE1-204ENST00000367248 ID3Q02535 119 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 LYPD2Q6UXB3 125 aa9.57□□□□□ -0.88
SYNE1-204ENST00000367248 MRAPQ8TCY5 172 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms