RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 C20orf24Q9BUV8 137 aa8.78□□□□□ -1
H3F3A-202ENST00000366814 LSM4Q9Y4Z0 139 aaKnown RBP8.78□□□□□ -1
H3F3A-202ENST00000366814 IGHV1-3A0A0C4DH29 117 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 H3BQ15 152 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 SLC25A17O43808 307 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 MT-CO2P00403 227 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 IGLV2-23P01705 113 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 PAX6P26367 422 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 MAS1LP35410 378 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 RPL29P47914 159 aaKnown RBP8.77□□□□□ -1.01
H3F3A-202ENST00000366814 B2MP61769 119 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 PNRC1Q12796 327 aaPredicted RBP8.77□□□□□ -1.01
H3F3A-202ENST00000366814 BSXQ3C1V8 233 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 PNKDQ8N490 385 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 NANPQ8TBE9 248 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 CACNG8Q8WXS5 425 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 SLC35E1Q96K37 410 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 TUBA4BQ9H853 241 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 ZNF430Q9H8G1 570 aaPredicted RBP8.77□□□□□ -1.01
H3F3A-202ENST00000366814 C2CD3Q4AC94 2353 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 C22orf46C9J442 243 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 HMGB3O15347 200 aaKnown RBP8.77□□□□□ -1.01
H3F3A-202ENST00000366814 RNASE2P10153 161 aaKnown RBP8.77□□□□□ -1.01
H3F3A-202ENST00000366814 HTR1DP28221 377 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 GPX4P36969 197 aaPredicted RBP8.77□□□□□ -1.01
H3F3A-202ENST00000366814 EFNA4P52798 201 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 RHOBP62745 196 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 CLEC12BQ2HXU8 276 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 TMEM249Q2WGJ8 235 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 MIC13Q5XKP0 118 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 TMEM144Q7Z5S9 345 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 CIARTQ8N365 385 aaPredicted RBP8.77□□□□□ -1.01
H3F3A-202ENST00000366814 Q8N7P7 452 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 OR4P4Q8NGL7 312 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 RNF5Q99942 180 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 SMR3AQ99954 134 aa8.77□□□□□ -1.01
H3F3A-202ENST00000366814 IGHV3-72A0A0B4J1Y9 119 aa8.76□□□□□ -1.01
H3F3A-202ENST00000366814 B4DEV8 164 aa8.76□□□□□ -1.01
H3F3A-202ENST00000366814 TMEM250H0YL14 139 aa8.76□□□□□ -1.01
H3F3A-202ENST00000366814 NDUFS7O75251 213 aa8.76□□□□□ -1.01
H3F3A-202ENST00000366814 CXorf1O96002 111 aa8.76□□□□□ -1.01
H3F3A-202ENST00000366814 FBP1P09467 338 aa8.76□□□□□ -1.01
H3F3A-202ENST00000366814 RIPPLY3P57055 190 aa8.76□□□□□ -1.01
H3F3A-202ENST00000366814 CD69Q07108 199 aa8.76□□□□□ -1.01
H3F3A-202ENST00000366814 STPG3Q8N7X2 389 aa8.76□□□□□ -1.01
H3F3A-202ENST00000366814 OR10W1Q8NGF6 305 aa8.76□□□□□ -1.01
H3F3A-202ENST00000366814 RNASEH2CQ8TDP1 164 aaKnown RBP8.76□□□□□ -1.01
H3F3A-202ENST00000366814 TXNDC17Q9BRA2 123 aa8.76□□□□□ -1.01
H3F3A-202ENST00000366814 SETD2Q9BYW2 2564 aaPredicted RBP8.75□□□□□ -1.01
H3F3A-202ENST00000366814 ZNF469Q96JG9 3925 aaPredicted RBP8.75□□□□□ -1.01
H3F3A-202ENST00000366814 LOC105371267A0A1B0GV96 52 aa8.75□□□□□ -1.01
H3F3A-202ENST00000366814 TSPAN9O75954 239 aa8.75□□□□□ -1.01
H3F3A-202ENST00000366814 IGHV4-39P01824 125 aa8.75□□□□□ -1.01
H3F3A-202ENST00000366814 ARF6P62330 175 aa8.75□□□□□ -1.01
H3F3A-202ENST00000366814 C1orf122Q6ZSJ8 110 aa8.75□□□□□ -1.01
H3F3A-202ENST00000366814 Q71RC1 249 aaPredicted RBP8.75□□□□□ -1.01
H3F3A-202ENST00000366814 KIR3DL3Q8N743 410 aa8.75□□□□□ -1.01
H3F3A-202ENST00000366814 OR11H6Q8NGC7 330 aa8.75□□□□□ -1.01
H3F3A-202ENST00000366814 SSMEM1Q8WWF3 244 aa8.75□□□□□ -1.01
H3F3A-202ENST00000366814 DPM3Q9P2X0 92 aa8.75□□□□□ -1.01
H3F3A-202ENST00000366814 MLXQ9UH92 298 aa8.75□□□□□ -1.01
H3F3A-202ENST00000366814 A0A087WWC5 75 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 ZNF727A8MUV8 499 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 YIF1AO95070 293 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 PRTN3P24158 256 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 AKR1C3P42330 323 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 RPL27AP46776 148 aaKnown RBP8.74□□□□□ -1.01
H3F3A-202ENST00000366814 TNXAQ16473 311 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 TPTE2P1Q5T6R2 138 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 FAM90A2PQ658T7 463 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 ETFRF1Q6IPR1 90 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 SLC16A13Q7RTY0 426 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 OR4F5Q8NH21 305 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 OR4F4Q96R69 305 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 C19orf24Q9BVV8 132 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 TMPRSS5Q9H3S3 457 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 SIRT7Q9NRC8 400 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 PRELID1Q9Y255 219 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 VPS13CQ709C8 3753 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 PDE6DO43924 150 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 LY6G6DO95868 133 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 MT-ND4LP03901 98 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 COMPP49747 757 aaPredicted RBP8.74□□□□□ -1.01
H3F3A-202ENST00000366814 FLI1Q01543 452 aaPredicted RBP8.74□□□□□ -1.01
H3F3A-202ENST00000366814 PLGLAQ15195 96 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 PSG5Q15238 335 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 PRSS8Q16651 343 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 PPP1R27Q86WC6 154 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 C22orf15Q8WYQ4 148 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 SMIM7Q9BQ49 75 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 METTL1Q9UBP6 276 aaKnown RBP8.74□□□□□ -1.01
H3F3A-202ENST00000366814 MALRD1Q5VYJ5 2156 aa8.74□□□□□ -1.01
H3F3A-202ENST00000366814 C11orf94C9JXX5 98 aa8.73□□□□□ -1.01
H3F3A-202ENST00000366814 LY6LH3BQJ8 138 aa8.73□□□□□ -1.01
H3F3A-202ENST00000366814 CORTO00230 105 aa8.73□□□□□ -1.01
H3F3A-202ENST00000366814 EIF3GO75821 320 aaKnown RBP eCLIP8.73□□□□□ -1.01
H3F3A-202ENST00000366814 OR2C1O95371 312 aa8.73□□□□□ -1.01
H3F3A-202ENST00000366814 STAG3L2P0CL84 134 aa8.73□□□□□ -1.01
H3F3A-202ENST00000366814 STAG3L3P0CL85 134 aa8.73□□□□□ -1.01
H3F3A-202ENST00000366814 DLX1P56177 255 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms