RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 DDI1Q8WTU0 396 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 C11orf40Q8WZ69 217 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 KLK6Q92876 244 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 HIST1H2BHQ93079 126 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 TMEM106AQ96A25 262 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 OPTNQ96CV9 577 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 OBSCN-AS1Q96MR7 158 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 HIST1H2BNQ99877 126 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 HIST1H2BMQ99879 126 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 MRPL57Q9BQC6 102 aaKnown RBP0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 GINS4Q9BRT9 223 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 CISHQ9NSE2 258 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 OR5AC2Q9NZP5 309 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 CKLFQ9UBR5 152 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 SIP14410 1827 aa0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 MYO18AQ92614 2054 aaKnown RBP0.33□□□□□ -2.36
RNU4-48P-201ENST00000365559 KIAA1549Q9HCM3 1950 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 RIC1Q4ADV7 1423 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 USP24Q9UPU5 2620 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 IGKV1D-42A0A075B6H8 117 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 EEF1E1-BLOC1S5C9J1V9 151 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 PHGR1C9JFL3 82 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 KCNK1O00180 336 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 PSMD12O00232 456 aaPredicted RBP0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 TGOLN2O43493 480 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 OR5F1O95221 314 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 IGKV1-5P01602 117 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 CLPSP04118 112 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 KRT7P08729 469 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 OR5G3P0C626 314 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 FKBP2P26885 142 aaKnown RBP0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 BRS3P32247 399 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 SPCS3P61009 180 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 UBE2IP63279 158 aaKnown RBP0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 HBA1P69905 142 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 PMAIP1Q13794 54 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 KISS1Q15726 138 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 KHDC3LQ587J8 217 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 SPANXN3Q5MJ09 141 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 LPCAT4Q643R3 524 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 C8orf74Q6P047 294 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 LPCAT3Q6P1A2 487 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 SFXN4Q6P4A7 337 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 RPL22L1Q6P5R6 122 aaKnown RBP0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 LCN15Q6UWW0 184 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 ZNF826PQ6ZT77 177 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 BPIFA4PQ86YQ2 179 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 CLVS1Q8IUQ0 354 aaPredicted RBP0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 LRRC25Q8N386 305 aaPredicted RBP0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 RASSF5Q8WWW0 418 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 DNAJC9Q8WXX5 260 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 SLC35B4Q969S0 331 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 PTH2Q96A98 100 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 SCGB3A1Q96QR1 104 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 SLC50A1Q9BRV3 221 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 DERL1Q9BUN8 251 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 PRTFDC1Q9NRG1 225 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 CMTM6Q9NX76 183 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 GUCA1BQ9UMX6 200 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 E9PCH4 1651 aa0.32□□□□□ -2.36
RNU4-48P-201ENST00000365559 FANCMQ8IYD8 2048 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 MYO5AQ9Y4I1 1855 aaKnown RBP0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 MYH2Q9UKX2 1941 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 A0A087WX48 190 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 TRBV6-7A0A0A0MS04 114 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 TGIF2-C20orf24A0A0A6YYL0 155 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 TRAV1-1A0A0B4J248 108 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 DPRXA6NFQ7 191 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 C19orf84I3L1E1 186 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 FADS1O60427 444 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 IFNA5P01569 189 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 HLA-DRB1P01911 266 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 HTR1AP08908 422 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 ASAH2BP0C7U1 165 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 HIST1H1EP10412 219 aaKnown RBP0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 CRYGAP11844 174 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 CD79AP11912 226 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 SPI1P17947 270 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 RPL5P46777 297 aaKnown RBP0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 DEFA1P59665 94 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 PSME3P61289 254 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 MAGOHP61326 146 aaKnown RBP0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 SNRPD2P62316 118 aaKnown RBP0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 KCNJ8Q15842 424 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 HIST3H3Q16695 136 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 SPANXN5Q5MJ07 72 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 CCDC122Q5T0U0 273 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 SPOPLQ6IQ16 392 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 ALKAL1Q6UXT8 129 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 DPPA3Q6W0C5 159 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 MIR17HGQ75NE6 70 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 DEFB128Q7Z7B8 93 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 OOSP2Q86WS3 158 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 C1orf158Q8N1D5 194 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 ANKRD29Q8N6D5 301 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 OR4E2Q8NGC2 313 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 OR4D11Q8NGI4 311 aa0.31□□□□□ -2.36
RNU4-48P-201ENST00000365559 OR13C4Q8NGS5 318 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms