RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 RAB5CP51148 216 aa18.33■□□□□ 0.52
SDF4-202ENST00000360001 ASPHD1Q5U4P2 390 aa18.33■□□□□ 0.52
SDF4-202ENST00000360001 CTRB2Q6GPI1 263 aa18.33■□□□□ 0.52
SDF4-202ENST00000360001 FNDC4Q9H6D8 234 aaPredicted RBP18.33■□□□□ 0.52
SDF4-202ENST00000360001 DMRT1Q9Y5R6 373 aa18.33■□□□□ 0.52
SDF4-202ENST00000360001 TLN2Q9Y4G6 2542 aa18.32■□□□□ 0.52
SDF4-202ENST00000360001 UMAD1C9J7I0 102 aa18.32■□□□□ 0.52
SDF4-202ENST00000360001 AMY1AP04745 511 aa18.32■□□□□ 0.52
SDF4-202ENST00000360001 EGR2P11161 476 aaPredicted RBP18.32■□□□□ 0.52
SDF4-202ENST00000360001 GPX4P36969 197 aaPredicted RBP18.32■□□□□ 0.52
SDF4-202ENST00000360001 FHITP49789 147 aa18.32■□□□□ 0.52
SDF4-202ENST00000360001 KRTAP1-1Q07627 177 aa18.32■□□□□ 0.52
SDF4-202ENST00000360001 LY6EQ16553 131 aa18.32■□□□□ 0.52
SDF4-202ENST00000360001 CACNG8Q8WXS5 425 aa18.32■□□□□ 0.52
SDF4-202ENST00000360001 LSM4Q9Y4Z0 139 aaKnown RBP18.32■□□□□ 0.52
SDF4-202ENST00000360001 GAMTQ14353 236 aa18.31■□□□□ 0.52
SDF4-202ENST00000360001 TRIM77I1YAP6 450 aa18.31■□□□□ 0.52
SDF4-202ENST00000360001 MPDU1O75352 247 aa18.31■□□□□ 0.52
SDF4-202ENST00000360001 SERF2P84101 59 aa18.31■□□□□ 0.52
SDF4-202ENST00000360001 SLC16A13Q7RTY0 426 aa18.31■□□□□ 0.52
SDF4-202ENST00000360001 MYO9AB2RTY4 2548 aa18.31■□□□□ 0.52
SDF4-202ENST00000360001 MXRA5Q9NR99 2828 aa18.3■□□□□ 0.52
SDF4-202ENST00000360001 SH2D7A6NKC9 451 aaPredicted RBP18.3■□□□□ 0.52
SDF4-202ENST00000360001 OPRK1P41145 380 aa18.3■□□□□ 0.52
SDF4-202ENST00000360001 AKR1C1Q04828 323 aa18.3■□□□□ 0.52
SDF4-202ENST00000360001 PXDC1Q5TGL8 231 aa18.3■□□□□ 0.52
SDF4-202ENST00000360001 Q6ZRG5 221 aa18.3■□□□□ 0.52
SDF4-202ENST00000360001 MISP3Q96FF7 219 aa18.3■□□□□ 0.52
SDF4-202ENST00000360001 MGST2Q99735 147 aa18.3■□□□□ 0.52
SDF4-202ENST00000360001 WNT10AQ9GZT5 417 aa18.3■□□□□ 0.52
SDF4-202ENST00000360001 MED9Q9NWA0 146 aa18.3■□□□□ 0.52
SDF4-202ENST00000360001 PRH1P02810 166 aa18.3■□□□□ 0.52
SDF4-202ENST00000360001 CRYGCP07315 174 aa18.3■□□□□ 0.52
SDF4-202ENST00000360001 AKR1C8PQ5T2L2 129 aa18.3■□□□□ 0.52
SDF4-202ENST00000360001 PITPNC1Q9UKF7 332 aa18.3■□□□□ 0.52
SDF4-202ENST00000360001 NOTCH2Q04721 2471 aa18.29■□□□□ 0.52
SDF4-202ENST00000360001 TEX46H3BTG2 121 aa18.29■□□□□ 0.52
SDF4-202ENST00000360001 BLOC1S1P78537 153 aa18.29■□□□□ 0.52
SDF4-202ENST00000360001 TEPPQ6URK8 271 aa18.29■□□□□ 0.52
SDF4-202ENST00000360001 TMEM144Q7Z5S9 345 aa18.29■□□□□ 0.52
SDF4-202ENST00000360001 ZNF709Q8N972 641 aa18.29■□□□□ 0.52
SDF4-202ENST00000360001 OR2T6Q8NHC8 308 aa18.29■□□□□ 0.52
SDF4-202ENST00000360001 VSIRQ9H7M9 311 aa18.29■□□□□ 0.52
SDF4-202ENST00000360001 PARP11Q9NR21 331 aa18.29■□□□□ 0.52
SDF4-202ENST00000360001 NPIPB5A8MRT5 1133 aa18.28■□□□□ 0.52
SDF4-202ENST00000360001 IGHV4-59P01825 116 aa18.28■□□□□ 0.52
SDF4-202ENST00000360001 CAMLGP49069 296 aa18.28■□□□□ 0.52
SDF4-202ENST00000360001 COMMD7Q86VX2 200 aa18.28■□□□□ 0.52
SDF4-202ENST00000360001 LFNGQ8NES3 379 aa18.28■□□□□ 0.52
SDF4-202ENST00000360001 C17orf112F2Z3M2 114 aa18.28■□□□□ 0.52
SDF4-202ENST00000360001 CORTO00230 105 aa18.28■□□□□ 0.52
SDF4-202ENST00000360001 IER3P46695 156 aa18.28■□□□□ 0.52
SDF4-202ENST00000360001 ACSM6Q6P461 480 aa18.28■□□□□ 0.52
SDF4-202ENST00000360001 TTC9CQ8N5M4 171 aa18.28■□□□□ 0.52
SDF4-202ENST00000360001 SGMS2Q8NHU3 365 aa18.28■□□□□ 0.52
SDF4-202ENST00000360001 FAM213BQ8TBF2 198 aa18.28■□□□□ 0.52
SDF4-202ENST00000360001 GGTLC1Q9BX51 225 aa18.28■□□□□ 0.52
SDF4-202ENST00000360001 IGKV1OR2-108A0A075B7D4 117 aa18.27■□□□□ 0.52
SDF4-202ENST00000360001 LINC01548A6NM66 108 aa18.27■□□□□ 0.52
SDF4-202ENST00000360001 ATP6V0E1O15342 81 aa18.27■□□□□ 0.52
SDF4-202ENST00000360001 ELLP55199 621 aaPredicted RBP18.27■□□□□ 0.52
SDF4-202ENST00000360001 SLC35E1Q96K37 410 aa18.27■□□□□ 0.52
SDF4-202ENST00000360001 ZNF48Q96MX3 618 aaPredicted RBP18.27■□□□□ 0.52
SDF4-202ENST00000360001 RPRMQ9NS64 109 aa18.27■□□□□ 0.52
SDF4-202ENST00000360001 MRPL36Q9P0J6 103 aaKnown RBP18.27■□□□□ 0.52
SDF4-202ENST00000360001 ACANP16112 2415 aa18.27■□□□□ 0.51
SDF4-202ENST00000360001 CD5LO43866 347 aa18.26■□□□□ 0.51
SDF4-202ENST00000360001 IGHV3-48P01763 117 aa18.26■□□□□ 0.51
SDF4-202ENST00000360001 DEFA4P12838 97 aa18.26■□□□□ 0.51
SDF4-202ENST00000360001 PFDN2Q9UHV9 154 aa18.26■□□□□ 0.51
SDF4-202ENST00000360001 AGPAT2O15120 278 aa18.26■□□□□ 0.51
SDF4-202ENST00000360001 C16orf82Q7Z2V1 217 aa18.26■□□□□ 0.51
SDF4-202ENST00000360001 OR1L6Q8NGR2 347 aa18.26■□□□□ 0.51
SDF4-202ENST00000360001 LYPD6BQ8NI32 183 aa18.26■□□□□ 0.51
SDF4-202ENST00000360001 ACY3Q96HD9 319 aa18.26■□□□□ 0.51
SDF4-202ENST00000360001 M0QZK8 103 aa18.25■□□□□ 0.51
SDF4-202ENST00000360001 ZNF616Q08AN1 781 aa18.25■□□□□ 0.51
SDF4-202ENST00000360001 FFAR4Q5NUL3 377 aa18.25■□□□□ 0.51
SDF4-202ENST00000360001 ETFRF1Q6IPR1 90 aa18.25■□□□□ 0.51
SDF4-202ENST00000360001 DPPA3Q6W0C5 159 aa18.25■□□□□ 0.51
SDF4-202ENST00000360001 Q6YL49 198 aa18.25■□□□□ 0.51
SDF4-202ENST00000360001 IL17RELQ6ZVW7 336 aa18.25■□□□□ 0.51
SDF4-202ENST00000360001 HRH4Q9H3N8 390 aa18.25■□□□□ 0.51
SDF4-202ENST00000360001 MT-CO2P00403 227 aa18.24■□□□□ 0.51
SDF4-202ENST00000360001 TMEM41BQ5BJD5 291 aa18.24■□□□□ 0.51
SDF4-202ENST00000360001 PRDM13Q9H4Q3 707 aa18.24■□□□□ 0.51
SDF4-202ENST00000360001 I3L2K1 104 aa18.24■□□□□ 0.51
SDF4-202ENST00000360001 RAB31Q13636 194 aa18.24■□□□□ 0.51
SDF4-202ENST00000360001 TEX29Q8N6K0 151 aa18.24■□□□□ 0.51
SDF4-202ENST00000360001 NPIPB3Q92617 1050 aa18.24■□□□□ 0.51
SDF4-202ENST00000360001 FANCD2OSQ96PS1 177 aa18.24■□□□□ 0.51
SDF4-202ENST00000360001 IGHV3-21A0A0B4J1V1 117 aa18.23■□□□□ 0.51
SDF4-202ENST00000360001 RAB2AP61019 212 aa18.23■□□□□ 0.51
SDF4-202ENST00000360001 MIC13Q5XKP0 118 aa18.23■□□□□ 0.51
SDF4-202ENST00000360001 OR5T1Q8NG75 326 aa18.23■□□□□ 0.51
SDF4-202ENST00000360001 OR5R1Q8NH85 324 aa18.23■□□□□ 0.51
SDF4-202ENST00000360001 CITED4Q96RK1 184 aa18.23■□□□□ 0.51
SDF4-202ENST00000360001 IGLV11-55A0A075B6I3 123 aa18.22■□□□□ 0.51
SDF4-202ENST00000360001 RND2P52198 227 aa18.22■□□□□ 0.51
SDF4-202ENST00000360001 ECSCRQ19T08 205 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms