RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 RND2P52198 227 aa11.28□□□□□ -0.6
CSNK1E-201ENST00000359867 PMS2P11Q13670 270 aa11.28□□□□□ -0.6
CSNK1E-201ENST00000359867 ATP6V1FQ16864 119 aa11.28□□□□□ -0.6
CSNK1E-201ENST00000359867 IQCJQ1A5X6 159 aa11.28□□□□□ -0.6
CSNK1E-201ENST00000359867 LRRC75BQ2VPJ9 315 aa11.28□□□□□ -0.6
CSNK1E-201ENST00000359867 PDLIM3Q53GG5 364 aaPredicted RBP11.28□□□□□ -0.6
CSNK1E-201ENST00000359867 C8orf31Q8N9H6 132 aa11.28□□□□□ -0.6
CSNK1E-201ENST00000359867 LHX4Q969G2 390 aa11.28□□□□□ -0.6
CSNK1E-201ENST00000359867 CHODLQ9H9P2 273 aa11.28□□□□□ -0.6
CSNK1E-201ENST00000359867 CTSZQ9UBR2 303 aa11.28□□□□□ -0.6
CSNK1E-201ENST00000359867 RPH3ALQ9UNE2 315 aa11.28□□□□□ -0.6
CSNK1E-201ENST00000359867 XKRY2A2RUG3 117 aa11.27□□□□□ -0.6
CSNK1E-201ENST00000359867 OR9G9P0C7N8 305 aa11.27□□□□□ -0.6
CSNK1E-201ENST00000359867 MRPL41Q8IXM3 137 aaKnown RBP11.27□□□□□ -0.6
CSNK1E-201ENST00000359867 OR10G4Q8NGN3 311 aa11.27□□□□□ -0.6
CSNK1E-201ENST00000359867 OR4A16Q8NH70 328 aa11.27□□□□□ -0.6
CSNK1E-201ENST00000359867 MBD3L1Q8WWY6 194 aa11.27□□□□□ -0.6
CSNK1E-201ENST00000359867 H1FXQ92522 213 aaKnown RBP11.27□□□□□ -0.6
CSNK1E-201ENST00000359867 VAX2Q9UIW0 290 aa11.27□□□□□ -0.6
CSNK1E-201ENST00000359867 CIDEAO60543 219 aa11.27□□□□□ -0.61
CSNK1E-201ENST00000359867 PNRC1Q12796 327 aaPredicted RBP11.27□□□□□ -0.61
CSNK1E-201ENST00000359867 TDRG1Q3Y452 100 aa11.27□□□□□ -0.61
CSNK1E-201ENST00000359867 TMEM41BQ5BJD5 291 aa11.27□□□□□ -0.61
CSNK1E-201ENST00000359867 RPP25LQ8N5L8 163 aaKnown RBP11.27□□□□□ -0.61
CSNK1E-201ENST00000359867 WDR61Q9GZS3 305 aaKnown RBP11.27□□□□□ -0.61
CSNK1E-201ENST00000359867 GSX1Q9H4S2 264 aaPredicted RBP11.27□□□□□ -0.61
CSNK1E-201ENST00000359867 SLC39A9Q9NUM3 307 aa11.27□□□□□ -0.61
CSNK1E-201ENST00000359867 C20orf202A1L168 122 aa11.26□□□□□ -0.61
CSNK1E-201ENST00000359867 SLC38A11Q08AI6 406 aa11.26□□□□□ -0.61
CSNK1E-201ENST00000359867 POU2AF1Q16633 256 aa11.26□□□□□ -0.61
CSNK1E-201ENST00000359867 NUDT10Q8NFP7 164 aa11.26□□□□□ -0.61
CSNK1E-201ENST00000359867 ZNF596Q8TC21 504 aa11.26□□□□□ -0.61
CSNK1E-201ENST00000359867 PSMG3Q9BT73 122 aaPredicted RBP11.26□□□□□ -0.61
CSNK1E-201ENST00000359867 QTRT1Q9BXR0 403 aaKnown RBP11.26□□□□□ -0.61
CSNK1E-201ENST00000359867 HIPK2Q9H2X6 1198 aa11.26□□□□□ -0.61
CSNK1E-201ENST00000359867 MED13LQ71F56 2210 aa11.26□□□□□ -0.61
CSNK1E-201ENST00000359867 CCL3L1P16619 93 aa11.26□□□□□ -0.61
CSNK1E-201ENST00000359867 SELENOTP62341 195 aa11.26□□□□□ -0.61
CSNK1E-201ENST00000359867 PRSS8Q16651 343 aa11.26□□□□□ -0.61
CSNK1E-201ENST00000359867 SPINK9Q5DT21 86 aa11.26□□□□□ -0.61
CSNK1E-201ENST00000359867 ACSM6Q6P461 480 aa11.26□□□□□ -0.61
CSNK1E-201ENST00000359867 LINC00311Q8N616 119 aa11.26□□□□□ -0.61
CSNK1E-201ENST00000359867 TAF15Q92804 592 aaKnown RBP eCLIP11.26□□□□□ -0.61
CSNK1E-201ENST00000359867 HRASP01112 189 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 OPN1MWP04001 364 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 OPN1MW2P0DN77 364 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 OPN1MW3P0DN78 364 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 RELBQ01201 579 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 FAM71F2Q6NXP2 309 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 ZNF833PQ6ZTB9 187 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 PINX1Q96BK5 328 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 TIMD4Q96H15 378 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 TMEM140Q9NV12 185 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 TRBV24-1A0A075B6N3 115 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 TMEM238C9JI98 176 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 M0QZ24 198 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 NDUFB8O95169 186 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 GPR6P46095 362 aaPredicted RBP11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 DLX6P56179 175 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 GNB2P62879 340 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 TMEM155Q4W5P6 130 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 Q6ZVH6 145 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 RAB1CQ92928 201 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 BPESC1Q9GZL8 116 aa11.25□□□□□ -0.61
CSNK1E-201ENST00000359867 PMS2P5A8MQ11 134 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 CT45A6P0DMU7 189 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 CT45A5P0DMU8 189 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 CT45A7P0DMV0 189 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 SERF2P84101 59 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 MEF2BQ02080 365 aaPredicted RBP11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 RTL8BQ17RB0 113 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 GBGT1Q8N5D6 347 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 OR10P1Q8NGE3 313 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 OR4F5Q8NH21 305 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 ZDHHC16Q969W1 377 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 OR4F4Q96R69 305 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 PCGF1Q9BSM1 259 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 TMEM242Q9NWH2 141 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 AURKAIP1Q9NWT8 199 aaPredicted RBP11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 NAT8Q9UHE5 227 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 LOC105371242A0A075B767 164 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 IFNA1P01562 189 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 CD33P20138 364 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 RPL23P62829 140 aaKnown RBP11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 TMEM241Q24JQ0 296 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 BSXQ3C1V8 233 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 FKBP11Q9NYL4 201 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 CCDC168Q8NDH2 2452 aa11.24□□□□□ -0.61
CSNK1E-201ENST00000359867 K7EP13 123 aa11.23□□□□□ -0.61
CSNK1E-201ENST00000359867 GALR1P47211 349 aa11.23□□□□□ -0.61
CSNK1E-201ENST00000359867 P2RX4Q99571 388 aa11.23□□□□□ -0.61
CSNK1E-201ENST00000359867 ALKBH7Q9BT30 221 aaPredicted RBP11.23□□□□□ -0.61
CSNK1E-201ENST00000359867 TMEM147Q9BVK8 224 aa11.23□□□□□ -0.61
CSNK1E-201ENST00000359867 PARLQ9H300 379 aa11.23□□□□□ -0.61
CSNK1E-201ENST00000359867 SLC35D1Q9NTN3 355 aa11.23□□□□□ -0.61
CSNK1E-201ENST00000359867 TIMM9Q9Y5J7 89 aa11.23□□□□□ -0.61
CSNK1E-201ENST00000359867 MALRD1Q5VYJ5 2156 aa11.23□□□□□ -0.61
CSNK1E-201ENST00000359867 PFN1P07737 140 aaKnown RBP11.23□□□□□ -0.61
CSNK1E-201ENST00000359867 VKORC1L1Q8N0U8 176 aa11.23□□□□□ -0.61
CSNK1E-201ENST00000359867 TMEM37Q8WXS4 190 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms