RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 NKD1Q969G9 470 aa3.66□□□□□ -1.82
PTPN22-201ENST00000359785 RARRES3Q9UL19 164 aa3.66□□□□□ -1.82
PTPN22-201ENST00000359785 PAM16Q9Y3D7 125 aa3.66□□□□□ -1.82
PTPN22-201ENST00000359785 TRAV8-6A0A0B4J262 113 aa3.65□□□□□ -1.82
PTPN22-201ENST00000359785 LHBP01229 141 aa3.65□□□□□ -1.82
PTPN22-201ENST00000359785 IGLV2-11P01706 119 aa3.65□□□□□ -1.82
PTPN22-201ENST00000359785 SSTR5P35346 364 aa3.65□□□□□ -1.82
PTPN22-201ENST00000359785 MPV17P39210 176 aa3.65□□□□□ -1.82
PTPN22-201ENST00000359785 OTPQ5XKR4 325 aa3.65□□□□□ -1.82
PTPN22-201ENST00000359785 UNQ5815/PRO19632Q6UWF5 114 aa3.65□□□□□ -1.82
PTPN22-201ENST00000359785 ZNF833PQ6ZTB9 187 aa3.65□□□□□ -1.82
PTPN22-201ENST00000359785 C11orf53Q8IXP5 236 aa3.65□□□□□ -1.82
PTPN22-201ENST00000359785 ZNF418Q8TF45 676 aaPredicted RBP3.65□□□□□ -1.82
PTPN22-201ENST00000359785 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.65□□□□□ -1.82
PTPN22-201ENST00000359785 BORCS7Q96B45 105 aa3.65□□□□□ -1.82
PTPN22-201ENST00000359785 FXYD5Q96DB9 178 aa3.65□□□□□ -1.82
PTPN22-201ENST00000359785 TRGV9Q99603 122 aa3.65□□□□□ -1.82
PTPN22-201ENST00000359785 FAM240AA0A1B0GVK7 77 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 B4DGG1 531 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 TM4SF5O14894 197 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 TNXAQ16473 311 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 TIMM23BQ5SRD1 257 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 PMS2CLQ68D20 193 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 BRICD5Q6PL45 260 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 TMEM92Q6UXU6 159 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 PLXDC1Q8IUK5 500 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 OR1B1Q8NGR6 318 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 TMEM158Q8WZ71 300 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 FOXB1Q99853 325 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 SAMD10Q9BYL1 202 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 CENPMQ9NSP4 180 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 TMEM140Q9NV12 185 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 BOKQ9UMX3 212 aaPredicted RBP3.65□□□□□ -1.83
PTPN22-201ENST00000359785 RNF24Q9Y225 148 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 NUMA1Q14980 2115 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.65□□□□□ -1.83
PTPN22-201ENST00000359785 ZNF705FA8MVS1 300 aaPredicted RBP3.65□□□□□ -1.83
PTPN22-201ENST00000359785 KLRC4-KLRK1H3BQV0 150 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 MGST3O14880 152 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 MRPS12O15235 138 aaKnown RBP3.65□□□□□ -1.83
PTPN22-201ENST00000359785 CEACAM4O75871 244 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 IGLV1-44P01699 117 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 ZNF705DP0CH99 300 aaPredicted RBP3.65□□□□□ -1.83
PTPN22-201ENST00000359785 ZNF705BP0CI00 300 aaPredicted RBP3.65□□□□□ -1.83
PTPN22-201ENST00000359785 PTNP21246 168 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 GPR12P47775 334 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 AMTP48728 403 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 UBE2D3P61077 147 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 PPP1CAP62136 330 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 UBE2D2P62837 147 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 WIPI1Q5MNZ9 446 aaPredicted RBP3.65□□□□□ -1.83
PTPN22-201ENST00000359785 IBA57Q5T440 356 aaKnown RBP3.65□□□□□ -1.83
PTPN22-201ENST00000359785 RBPMS2Q6ZRY4 209 aaKnown RBP3.65□□□□□ -1.83
PTPN22-201ENST00000359785 IL17RELQ6ZVW7 336 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 TCF23Q7RTU1 214 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 OR1L4Q8NGR5 311 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 CCL4L1Q8NHW4 92 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 MMABQ96EY8 250 aaPredicted RBP3.65□□□□□ -1.83
PTPN22-201ENST00000359785 DERL1Q9BUN8 251 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 RPP21Q9H633 154 aaKnown RBP3.65□□□□□ -1.83
PTPN22-201ENST00000359785 SLC25A22Q9H936 323 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 JKAMPQ9P055 326 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 PRNDQ9UKY0 176 aa3.65□□□□□ -1.83
PTPN22-201ENST00000359785 LY6G6EA0A0G2JKS1 128 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 HELTA6NFD8 242 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 OR4C46A6NHA9 309 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 SLC31A1O15431 190 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 CRYGBP07316 175 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 C8orf88P0DMB2 117 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 COX6A1P12074 109 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 GP9P14770 177 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 TCL1AP56279 114 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 CARD18P57730 90 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 TLE1Q04724 770 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 MZT1Q08AG7 82 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 PDE6HQ13956 83 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 IL11RAQ14626 422 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 TMEM177Q53S58 311 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 MPV17L2Q567V2 206 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 SPRNQ5BIV9 151 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 ZNF542PQ5EBM4 170 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 SHISA6Q6ZSJ9 500 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 WDR86Q86TI4 376 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 STPG3Q8N7X2 389 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 ZNF709Q8N972 641 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 OR13H1Q8NG92 308 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 OR5AN1Q8NGI8 311 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 SRXN1Q9BYN0 137 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 MS4A5Q9H3V2 200 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 EDA2RQ9HAV5 297 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 ERG28Q9UKR5 140 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 U3KQA8 63 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 K7EM74 188 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 CER1O95813 267 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 ACP1P24666 158 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 SRIP30626 198 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 RPL30P62888 115 aaKnown RBP3.64□□□□□ -1.83
PTPN22-201ENST00000359785 FOXI1Q12951 378 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 LDLRAD2Q5SZI1 272 aa3.64□□□□□ -1.83
PTPN22-201ENST00000359785 BAGE3Q86Y29 109 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms