RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 M6PRP20645 277 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 EBI3Q14213 229 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 BSXQ3C1V8 233 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 TOR2AQ5JU69 321 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 FFAR4Q5NUL3 377 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 HCP5Q6MZN7 132 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 RBMS3Q6XE24 437 aaKnown RBP8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 HAPLN4Q86UW8 402 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 CCDC28AQ8IWP9 274 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 LINC01356Q8N9X3 169 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 SFT2D1Q8WV19 159 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 CFHR4Q92496 578 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 TBX15Q96SF7 602 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 RNF2Q99496 336 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 EIF5A2Q9GZV4 153 aaKnown RBP8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 FAM96BQ9Y3D0 163 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 CR1P17927 2039 aa8.62□□□□□ -1.03
TRAPPC4-201ENST00000359005 MALRD1Q5VYJ5 2156 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 CTXND1A0A1B0GTU2 59 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 OPN1MWP04001 364 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 OPN1MW2P0DN77 364 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 OPN1MW3P0DN78 364 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 RNASE2P10153 161 aaKnown RBP8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 SELENOTP62341 195 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 GNB1P62873 340 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 RUNX1Q01196 453 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 CD69Q07108 199 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 KLRD1Q13241 179 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 TMEM144Q7Z5S9 345 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 S100A7AQ86SG5 101 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 OR10G4Q8NGN3 311 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 OR10G9Q8NGN4 311 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 OR10G7Q8NGN6 311 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 OR1P1Q8NH06 330 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 ABHD5Q8WTS1 349 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 MBD3L1Q8WWY6 194 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 C1orf159Q96HA4 380 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 EAF1Q96JC9 268 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 TMEM68Q96MH6 324 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 RASL11BQ9BPW5 248 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 RSG1Q9BU20 258 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 THYN1Q9P016 225 aa8.61□□□□□ -1.03
TRAPPC4-201ENST00000359005 ANK2Q01484 3957 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 IGHV1-69DA0A0B4J2H0 117 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 NCBP2LA6PVI3 153 aaKnown RBP8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 FAM157AC9JC47 383 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 IGHV1-69P01742 117 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 DEFA4P12838 97 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 MDKP21741 143 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 SAA4P35542 130 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 RPL29P47914 159 aaKnown RBP8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 PMS2P11Q13670 270 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 HNF4GQ14541 408 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 GUK1Q16774 197 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 C5orf64Q2M2E5 130 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 TUSC1Q2TAM9 212 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 TREML4Q6UXN2 200 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 ZNF562Q6V9R5 426 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 LHFPL4Q7Z7J7 247 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 SUN5Q8TC36 379 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 SRSF12Q8WXF0 261 aaKnown RBP8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 P2RX4Q99571 388 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 FBXL15Q9H469 300 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 C7orf69Q9H7B7 122 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 PITPNC1Q9UKF7 332 aa8.6□□□□□ -1.03
TRAPPC4-201ENST00000359005 CENPVL3A0A0U1RRI6 287 aa8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 TMEM218A2RU14 115 aa8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 PRSS46E5RG02 174 aa8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 F8W036 122 aa8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 M0QZK8 103 aa8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 NDUFS6O75380 124 aaKnown RBP8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 S100A7P31151 101 aa8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 ELLP55199 621 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 RHOBP62745 196 aa8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 SRSF2Q01130 221 aaKnown RBP8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 CYB5R2Q6BCY4 276 aa8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 IL17RELQ6ZVW7 336 aa8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 SLC16A13Q7RTY0 426 aa8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 SVBPQ8N300 66 aa8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 PFDN5Q99471 154 aa8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 TXNDC17Q9BRA2 123 aa8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 SEC11CQ9BY50 192 aa8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 MANBALQ9NQG1 85 aa8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 RPRMQ9NS64 109 aa8.59□□□□□ -1.03
TRAPPC4-201ENST00000359005 FBN3Q75N90 2809 aa8.58□□□□□ -1.04
TRAPPC4-201ENST00000359005 A0A1W2PRD5 423 aa8.58□□□□□ -1.04
TRAPPC4-201ENST00000359005 A0A1W2PRF3 423 aa8.58□□□□□ -1.04
TRAPPC4-201ENST00000359005 A0A1W2PRM7 423 aa8.58□□□□□ -1.04
TRAPPC4-201ENST00000359005 MAP1LC3B2A6NCE7 125 aa8.58□□□□□ -1.04
TRAPPC4-201ENST00000359005 RBFOX3A6NFN3 312 aa8.58□□□□□ -1.04
TRAPPC4-201ENST00000359005 AGPAT2O15120 278 aa8.58□□□□□ -1.04
TRAPPC4-201ENST00000359005 SNAPINO95295 136 aa8.58□□□□□ -1.04
TRAPPC4-201ENST00000359005 FBP1P09467 338 aa8.58□□□□□ -1.04
TRAPPC4-201ENST00000359005 HIST1H1BP16401 226 aaKnown RBP8.58□□□□□ -1.04
TRAPPC4-201ENST00000359005 CDC34P49427 236 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC4-201ENST00000359005 PSMB3P49720 205 aa8.58□□□□□ -1.04
TRAPPC4-201ENST00000359005 TAS2R45P59539 299 aa8.58□□□□□ -1.04
TRAPPC4-201ENST00000359005 FXYD3Q14802 87 aa8.58□□□□□ -1.04
TRAPPC4-201ENST00000359005 KHDC3LQ587J8 217 aa8.58□□□□□ -1.04
TRAPPC4-201ENST00000359005 BPIFCQ8NFQ6 507 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms