RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 TRAV5A0A0B4J249 113 aa9.41□□□□□ -0.9
COL11A1-202ENST00000358392 IFNL4K9M1U5 179 aa9.41□□□□□ -0.9
COL11A1-202ENST00000358392 ORAOV1Q8WV07 137 aa9.41□□□□□ -0.9
COL11A1-202ENST00000358392 C12orf77C9JDV5 145 aa9.4□□□□□ -0.9
COL11A1-202ENST00000358392 TNFRSF6BO95407 300 aa9.4□□□□□ -0.9
COL11A1-202ENST00000358392 PAX1P15863 534 aa9.4□□□□□ -0.9
COL11A1-202ENST00000358392 RTBDNQ9BSG5 229 aaPredicted RBP9.4□□□□□ -0.9
COL11A1-202ENST00000358392 COLCA1Q6ZS62 124 aa9.4□□□□□ -0.9
COL11A1-202ENST00000358392 CRIM1Q9NZV1 1036 aa9.4□□□□□ -0.9
COL11A1-202ENST00000358392 LCNL1Q6ZST4 164 aa9.4□□□□□ -0.9
COL11A1-202ENST00000358392 RGPD4Q7Z3J3 1758 aa9.4□□□□□ -0.9
COL11A1-202ENST00000358392 PLXNB2O15031 1838 aa9.4□□□□□ -0.9
COL11A1-202ENST00000358392 TOMM40O96008 361 aa9.4□□□□□ -0.9
COL11A1-202ENST00000358392 CELA3AP09093 270 aa9.4□□□□□ -0.9
COL11A1-202ENST00000358392 OR9G4Q8NGQ1 327 aa9.4□□□□□ -0.9
COL11A1-202ENST00000358392 TMEM167AQ8TBQ9 72 aa9.4□□□□□ -0.9
COL11A1-202ENST00000358392 PAPPA2Q9BXP8 1791 aa9.4□□□□□ -0.91
COL11A1-202ENST00000358392 ATXN8Q156A1 80 aa9.4□□□□□ -0.91
COL11A1-202ENST00000358392 RALGAPA1Q6GYQ0 2036 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 TMEM14DPA8MWL7 114 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 GFRA3O60609 400 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 BSPH1Q075Z2 132 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 ZNF479Q96JC4 524 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 YAE1D1Q9NRH1 226 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 PILRBQ9UKJ0 227 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 RAMP3O60896 148 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 CHCHD5Q9BSY4 110 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 FHL5Q5TD97 284 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 CIARTQ8N365 385 aaPredicted RBP9.39□□□□□ -0.91
COL11A1-202ENST00000358392 PILRAQ9UKJ1 303 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 ERG28Q9UKR5 140 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 ARFGEF1Q9Y6D6 1849 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 C1orf162Q8NEQ5 155 aaPredicted RBP9.39□□□□□ -0.91
COL11A1-202ENST00000358392 GP6Q9HCN6 339 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 CARHSP1Q9Y2V2 147 aaKnown RBP9.39□□□□□ -0.91
COL11A1-202ENST00000358392 LAMB2P55268 1798 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 CELA3BP08861 270 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 APOBEC3AP31941 199 aaPredicted RBP9.39□□□□□ -0.91
COL11A1-202ENST00000358392 OR4X2Q8NGF9 303 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 MRAPQ8TCY5 172 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 SCRT1Q9BWW7 348 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 CFHR5Q9BXR6 569 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 PLNP26678 52 aa9.39□□□□□ -0.91
COL11A1-202ENST00000358392 VDAC2P45880 294 aaPredicted RBP9.38□□□□□ -0.91
COL11A1-202ENST00000358392 SMRP1Q8NCR6 262 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 NCR2O95944 276 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 EFEMP2O95967 443 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 RFPL3SP0C7P2 107 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 GAGE2BQ13066 116 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 GTSF1LQ9H1H1 148 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 OTORQ9NRC9 128 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 HS3ST3B1Q9Y662 390 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 ESPL1Q14674 2120 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 B9A039 149 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 INS-IGF2F8WCM5 200 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 INSP01308 110 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.38□□□□□ -0.91
COL11A1-202ENST00000358392 SLC25A45Q8N413 288 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 ZNF703Q9H7S9 590 aaPredicted RBP9.38□□□□□ -0.91
COL11A1-202ENST00000358392 ARAP2Q8WZ64 1704 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 UMODP07911 640 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 TMEM170AQ8WVE7 144 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 C7orf69Q9H7B7 122 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 JPT2Q9H910 190 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 TRAV9-2A0A087WT02 112 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 A0A0G2JLM5 398 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 A0A1W2PRS3 328 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 FABP5P3A8MUU1 101 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 SIGLEC12Q96PQ1 595 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 CYSLTR1Q9Y271 337 aa9.38□□□□□ -0.91
COL11A1-202ENST00000358392 TRAV14DV4A0A0A6YYC5 116 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 CCL1P22362 96 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 DPM3Q9P2X0 92 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 IGKV2-40A0A087WW87 121 aaPredicted RBP9.37□□□□□ -0.91
COL11A1-202ENST00000358392 IGKV1D-43A0A0B4J1Z2 117 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 PAX4O43316 350 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 IGKV2D-40P01614 121 aaPredicted RBP9.37□□□□□ -0.91
COL11A1-202ENST00000358392 CCL3L1P16619 93 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 ZNF474Q6S9Z5 364 aaPredicted RBP9.37□□□□□ -0.91
COL11A1-202ENST00000358392 LINC00527Q9UJ94 153 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 TIAF1O95411 115 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 CDKN1AP38936 164 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 FDCSPQ8NFU4 85 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 PEMTQ9UBM1 199 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 MYOFQ9NZM1 2061 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 UCNP55089 124 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 UBE2DNLQ8IWF7 75 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 IGHV3-53P01767 116 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 IGHMP01871 453 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 ZNF525Q8N782 197 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 SAA2-SAA4A0A096LPE2 208 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 SAA2P0DJI9 122 aaPredicted RBP9.37□□□□□ -0.91
COL11A1-202ENST00000358392 ZXDCQ2QGD7 858 aaPredicted RBP9.37□□□□□ -0.91
COL11A1-202ENST00000358392 CD200R1LQ6Q8B3 271 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 FAM168AQ92567 244 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 LY75O60449 1722 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 SVILO95425 2214 aa9.37□□□□□ -0.91
COL11A1-202ENST00000358392 A0A087WWC5 75 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 hDV102S1A0JD36 115 aa9.36□□□□□ -0.91
COL11A1-202ENST00000358392 MS4A6AQ9H2W1 248 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms