RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 SPANXN5Q5MJ07 72 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 ZNF491Q8N8L2 437 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 MYOZ3Q8TDC0 251 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 PINX1Q96BK5 328 aaKnown RBP11.86□□□□□ -0.51
TPM1-206ENST00000358278 WDR89Q96FK6 387 aaPredicted RBP11.86□□□□□ -0.51
TPM1-206ENST00000358278 USMG5Q96IX5 58 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 PSENENQ9NZ42 101 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 NUDT19A8MXV4 375 aa11.85□□□□□ -0.51
TPM1-206ENST00000358278 CORTO00230 105 aa11.85□□□□□ -0.51
TPM1-206ENST00000358278 IGHV3-11P01762 117 aa11.85□□□□□ -0.51
TPM1-206ENST00000358278 RLN2P04090 185 aa11.85□□□□□ -0.51
TPM1-206ENST00000358278 GIPP09681 153 aaPredicted RBP11.85□□□□□ -0.51
TPM1-206ENST00000358278 PET100P0DJ07 73 aa11.85□□□□□ -0.51
TPM1-206ENST00000358278 ATP5G2Q06055 141 aa11.85□□□□□ -0.51
TPM1-206ENST00000358278 KLHL30-AS1Q8NEE0 82 aa11.85□□□□□ -0.51
TPM1-206ENST00000358278 ASB13Q8WXK3 278 aa11.85□□□□□ -0.51
TPM1-206ENST00000358278 UBE2E2Q96LR5 201 aa11.85□□□□□ -0.51
TPM1-206ENST00000358278 STRAPQ9Y3F4 350 aaKnown RBP11.85□□□□□ -0.51
TPM1-206ENST00000358278 A0A1B0GVG6 124 aa11.84□□□□□ -0.51
TPM1-206ENST00000358278 NDUFB8O95169 186 aa11.84□□□□□ -0.51
TPM1-206ENST00000358278 IFNA4P05014 189 aa11.84□□□□□ -0.51
TPM1-206ENST00000358278 OR8U8P0C7N1 319 aa11.84□□□□□ -0.51
TPM1-206ENST00000358278 OPRK1P41145 380 aa11.84□□□□□ -0.51
TPM1-206ENST00000358278 ATP5IP56385 69 aaPredicted RBP11.84□□□□□ -0.51
TPM1-206ENST00000358278 RAB11AP62491 216 aa11.84□□□□□ -0.51
TPM1-206ENST00000358278 NSUN5P1Q3KNT7 163 aa11.84□□□□□ -0.51
TPM1-206ENST00000358278 NDUFA11Q86Y39 141 aa11.84□□□□□ -0.51
TPM1-206ENST00000358278 SMIM8Q96KF7 97 aa11.84□□□□□ -0.51
TPM1-206ENST00000358278 ANK2Q01484 3957 aa11.84□□□□□ -0.51
TPM1-206ENST00000358278 C15orf62A8K5M9 175 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 TSC22D2O75157 780 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 DEDDO75618 318 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 TMEM50AO95807 157 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 CDX1P47902 265 aaPredicted RBP11.83□□□□□ -0.52
TPM1-206ENST00000358278 BCAP31P51572 246 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 TAS2R30P59541 319 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 RAP2BP61225 183 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 EXOSC2Q13868 293 aaKnown RBP11.83□□□□□ -0.52
TPM1-206ENST00000358278 KLK9Q2XQG4 91 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 SHISA2Q6UWI4 295 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 TMEM170AQ8WVE7 144 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 CXorf58Q96LI9 332 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 OR5B12Q96R08 314 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 GNB4Q9HAV0 340 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 KLK9Q9UKQ9 250 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 IGHV3-21A0A0B4J1V1 117 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 MFSD2BA6NFX1 497 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 MPC2O95563 127 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 CAV2P51636 162 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 PAX9P55771 341 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 KIAA0141Q14154 515 aaPredicted RBP11.83□□□□□ -0.52
TPM1-206ENST00000358278 C18orf65Q6ZTR6 163 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 RNASEH2CQ8TDP1 164 aaKnown RBP11.83□□□□□ -0.52
TPM1-206ENST00000358278 C4orf3Q8WVX3 66 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 EEF1AKMT3Q96AZ1 226 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 OR4C12Q96R67 309 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 S4R3C0 116 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 VWFP04275 2813 aa11.83□□□□□ -0.52
TPM1-206ENST00000358278 MT-CO2P00403 227 aa11.82□□□□□ -0.52
TPM1-206ENST00000358278 IGHV3-23P01764 117 aa11.82□□□□□ -0.52
TPM1-206ENST00000358278 OR5AC2Q9NZP5 309 aa11.82□□□□□ -0.52
TPM1-206ENST00000358278 RPS10-NUDT3A0A1W2PQS6 291 aa11.81□□□□□ -0.52
TPM1-206ENST00000358278 E5RGE8 158 aa11.81□□□□□ -0.52
TPM1-206ENST00000358278 I3L2K1 104 aa11.81□□□□□ -0.52
TPM1-206ENST00000358278 K7EIM0 57 aa11.81□□□□□ -0.52
TPM1-206ENST00000358278 LGALS1P09382 135 aaKnown RBP11.81□□□□□ -0.52
TPM1-206ENST00000358278 FGL1Q08830 312 aa11.81□□□□□ -0.52
TPM1-206ENST00000358278 PVRIGQ6DKI7 326 aa11.81□□□□□ -0.52
TPM1-206ENST00000358278 ETV3LQ6ZN32 361 aa11.81□□□□□ -0.52
TPM1-206ENST00000358278 C8orf86Q6ZUL3 223 aa11.81□□□□□ -0.52
TPM1-206ENST00000358278 OR2T35Q8NGX2 323 aa11.81□□□□□ -0.52
TPM1-206ENST00000358278 VN1R17PQ8TDU5 208 aa11.81□□□□□ -0.52
TPM1-206ENST00000358278 SCARB1Q8WTV0 552 aa11.81□□□□□ -0.52
TPM1-206ENST00000358278 CHAC2Q8WUX2 184 aa11.81□□□□□ -0.52
TPM1-206ENST00000358278 LYRM2Q9NU23 88 aaPredicted RBP11.81□□□□□ -0.52
TPM1-206ENST00000358278 TRBV7-1A0A0A6YYK4 115 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 IGHV3-48P01763 117 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 METTL15P1P0C7V9 234 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 OR8G2PQ6IF36 304 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 PRSS54Q6PEW0 395 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 UBAC2Q8NBM4 344 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 THAP6Q8TBB0 222 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 C11orf1Q9H5F2 150 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 C21orf62Q9NYP8 219 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 MBD2Q9UBB5 411 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 ANKRD34BA5PLL1 514 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 ADARB2-AS1A8MUL3 147 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 H0YIZ8 118 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 DEFB136Q30KP8 78 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 ETFRF1Q6IPR1 90 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 ZNF343Q6P1L6 599 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 ACSM6Q6P461 480 aa11.8□□□□□ -0.52
TPM1-206ENST00000358278 FNDC4Q9H6D8 234 aaPredicted RBP11.8□□□□□ -0.52
TPM1-206ENST00000358278 FAM24AA6NFZ4 105 aa11.79□□□□□ -0.52
TPM1-206ENST00000358278 I3L521 148 aa11.79□□□□□ -0.52
TPM1-206ENST00000358278 CD69Q07108 199 aa11.79□□□□□ -0.52
TPM1-206ENST00000358278 Q56UQ5 140 aa11.79□□□□□ -0.52
TPM1-206ENST00000358278 FAM209BQ5JX69 171 aa11.79□□□□□ -0.52
TPM1-206ENST00000358278 TMEM14EPQ6UXP3 125 aa11.79□□□□□ -0.52
TPM1-206ENST00000358278 CLEC19AQ6UXS0 136 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms