RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 C1QTNF4Q9BXJ3 329 aa11.36□□□□□ -0.59
IFT20-202ENST00000357896 IGHV3-66A0A0C4DH42 116 aa11.35□□□□□ -0.59
IFT20-202ENST00000357896 A0A1W2PS18 150 aa11.35□□□□□ -0.59
IFT20-202ENST00000357896 TMEM235A6NFC5 223 aa11.35□□□□□ -0.59
IFT20-202ENST00000357896 I3L2K1 104 aa11.35□□□□□ -0.59
IFT20-202ENST00000357896 SPART-AS1P0CW21 52 aa11.35□□□□□ -0.59
IFT20-202ENST00000357896 NUTF2P61970 127 aaKnown RBP11.35□□□□□ -0.59
IFT20-202ENST00000357896 ACTL10Q5JWF8 245 aa11.35□□□□□ -0.59
IFT20-202ENST00000357896 AADACL3Q5VUY0 350 aa11.35□□□□□ -0.59
IFT20-202ENST00000357896 BORCS5Q969J3 196 aa11.35□□□□□ -0.59
IFT20-202ENST00000357896 SCRT2Q9NQ03 307 aa11.35□□□□□ -0.59
IFT20-202ENST00000357896 PRNDQ9UKY0 176 aa11.35□□□□□ -0.59
IFT20-202ENST00000357896 KNCNA6PVL3 124 aa11.34□□□□□ -0.59
IFT20-202ENST00000357896 K7EQG2 157 aa11.34□□□□□ -0.59
IFT20-202ENST00000357896 MT-CO2P00403 227 aa11.34□□□□□ -0.59
IFT20-202ENST00000357896 RAB3BP20337 219 aa11.34□□□□□ -0.59
IFT20-202ENST00000357896 MYL9P24844 172 aa11.34□□□□□ -0.59
IFT20-202ENST00000357896 TPRA1Q86W33 373 aa11.34□□□□□ -0.59
IFT20-202ENST00000357896 BEST4Q8NFU0 473 aa11.34□□□□□ -0.59
IFT20-202ENST00000357896 STXBP6Q8NFX7 210 aa11.34□□□□□ -0.59
IFT20-202ENST00000357896 KRTAP3-3Q9BYR6 98 aa11.34□□□□□ -0.59
IFT20-202ENST00000357896 KRTAP3-2Q9BYR7 98 aa11.34□□□□□ -0.59
IFT20-202ENST00000357896 RNF167Q9H6Y7 350 aa11.34□□□□□ -0.59
IFT20-202ENST00000357896 SSX5O60225 188 aa11.33□□□□□ -0.6
IFT20-202ENST00000357896 KRASP01116 189 aa11.33□□□□□ -0.6
IFT20-202ENST00000357896 ZNF688P0C7X2 276 aa11.33□□□□□ -0.6
IFT20-202ENST00000357896 NPPCP23582 126 aa11.33□□□□□ -0.6
IFT20-202ENST00000357896 NPBWR1P48145 328 aa11.33□□□□□ -0.6
IFT20-202ENST00000357896 FXYD4P59646 89 aa11.33□□□□□ -0.6
IFT20-202ENST00000357896 ZNF600Q6ZNG1 722 aa11.33□□□□□ -0.6
IFT20-202ENST00000357896 ZNF818PQ6ZRF7 136 aa11.33□□□□□ -0.6
IFT20-202ENST00000357896 ZNF367Q7RTV3 350 aa11.33□□□□□ -0.6
IFT20-202ENST00000357896 MOB3AQ96BX8 217 aa11.33□□□□□ -0.6
IFT20-202ENST00000357896 MGLLQ99685 303 aa11.33□□□□□ -0.6
IFT20-202ENST00000357896 NSG2Q9Y328 171 aa11.33□□□□□ -0.6
IFT20-202ENST00000357896 TMEM189A5PLL7 270 aa11.32□□□□□ -0.6
IFT20-202ENST00000357896 F2RP25116 425 aa11.32□□□□□ -0.6
IFT20-202ENST00000357896 FAM3BP58499 235 aaPredicted RBP11.32□□□□□ -0.6
IFT20-202ENST00000357896 TNP2Q05952 138 aa11.32□□□□□ -0.6
IFT20-202ENST00000357896 TSPAN14Q8NG11 270 aa11.32□□□□□ -0.6
IFT20-202ENST00000357896 TSC22D3Q99576 134 aa11.32□□□□□ -0.6
IFT20-202ENST00000357896 ZFAND3Q9H8U3 227 aa11.32□□□□□ -0.6
IFT20-202ENST00000357896 TPRKBQ9Y3C4 175 aa11.32□□□□□ -0.6
IFT20-202ENST00000357896 PUS1Q9Y606 427 aaKnown RBP eCLIP11.32□□□□□ -0.6
IFT20-202ENST00000357896 IGHV3-48P01763 117 aa11.31□□□□□ -0.6
IFT20-202ENST00000357896 PTHLHP12272 177 aa11.31□□□□□ -0.6
IFT20-202ENST00000357896 KCTD21Q4G0X4 260 aa11.31□□□□□ -0.6
IFT20-202ENST00000357896 ZNF114Q8NC26 417 aa11.31□□□□□ -0.6
IFT20-202ENST00000357896 PINX1Q96BK5 328 aaKnown RBP11.31□□□□□ -0.6
IFT20-202ENST00000357896 LRP1BQ9NZR2 4599 aa11.31□□□□□ -0.6
IFT20-202ENST00000357896 TEX48A0A1B0GUV7 120 aa11.3□□□□□ -0.6
IFT20-202ENST00000357896 RGS10O43665 173 aa11.3□□□□□ -0.6
IFT20-202ENST00000357896 FGF9P31371 208 aaPredicted RBP11.3□□□□□ -0.6
IFT20-202ENST00000357896 G6PCP35575 357 aa11.3□□□□□ -0.6
IFT20-202ENST00000357896 LPAR6P43657 344 aa11.3□□□□□ -0.6
IFT20-202ENST00000357896 EIF2B2P49770 351 aaKnown RBP11.3□□□□□ -0.6
IFT20-202ENST00000357896 TMEM17Q86X19 198 aa11.3□□□□□ -0.6
IFT20-202ENST00000357896 HOGA1Q86XE5 327 aa11.3□□□□□ -0.6
IFT20-202ENST00000357896 DCANP1Q8TF63 244 aa11.3□□□□□ -0.6
IFT20-202ENST00000357896 NARS2Q96I59 477 aaKnown RBP11.3□□□□□ -0.6
IFT20-202ENST00000357896 METTL26Q96S19 204 aa11.3□□□□□ -0.6
IFT20-202ENST00000357896 RAB40CQ96S21 281 aa11.3□□□□□ -0.6
IFT20-202ENST00000357896 NEU1Q99519 415 aa11.3□□□□□ -0.6
IFT20-202ENST00000357896 AGRNO00468 2067 aa11.3□□□□□ -0.6
IFT20-202ENST00000357896 SMIM9A6NGZ8 99 aa11.29□□□□□ -0.6
IFT20-202ENST00000357896 GNRHRP30968 328 aa11.29□□□□□ -0.6
IFT20-202ENST00000357896 FCAMRQ8WWV6 532 aa11.29□□□□□ -0.6
IFT20-202ENST00000357896 DUSP21Q9H596 190 aa11.29□□□□□ -0.6
IFT20-202ENST00000357896 XCL2Q9UBD3 114 aa11.29□□□□□ -0.6
IFT20-202ENST00000357896 TMED3Q9Y3Q3 217 aa11.29□□□□□ -0.6
IFT20-202ENST00000357896 A0A1B0GU03 582 aa11.28□□□□□ -0.6
IFT20-202ENST00000357896 RLN1P04808 185 aa11.28□□□□□ -0.6
IFT20-202ENST00000357896 CRYBB3P26998 211 aa11.28□□□□□ -0.6
IFT20-202ENST00000357896 P2RY1P47900 373 aa11.28□□□□□ -0.6
IFT20-202ENST00000357896 EMP1P54849 157 aa11.28□□□□□ -0.6
IFT20-202ENST00000357896 HERV-K104P61576 105 aa11.28□□□□□ -0.6
IFT20-202ENST00000357896 ERHP84090 104 aaKnown RBP11.28□□□□□ -0.6
IFT20-202ENST00000357896 APOBP04114 4563 aaKnown RBP11.28□□□□□ -0.6
IFT20-202ENST00000357896 TRDV1A0A1B0GX56 115 aa11.27□□□□□ -0.61
IFT20-202ENST00000357896 HELTA6NFD8 242 aa11.27□□□□□ -0.61
IFT20-202ENST00000357896 DBX1A6NMT0 343 aa11.27□□□□□ -0.61
IFT20-202ENST00000357896 PGLYRP1O75594 196 aaPredicted RBP11.27□□□□□ -0.61
IFT20-202ENST00000357896 TMEM50AO95807 157 aa11.27□□□□□ -0.61
IFT20-202ENST00000357896 AP2S1P53680 142 aaPredicted RBP11.27□□□□□ -0.61
IFT20-202ENST00000357896 DHRS2Q13268 280 aa11.27□□□□□ -0.61
IFT20-202ENST00000357896 PSMG4Q5JS54 123 aa11.27□□□□□ -0.61
IFT20-202ENST00000357896 ZNF705AQ6ZN79 300 aaPredicted RBP11.27□□□□□ -0.61
IFT20-202ENST00000357896 CMTM1Q8IZ96 169 aa11.27□□□□□ -0.61
IFT20-202ENST00000357896 C6orf223Q8N319 242 aa11.27□□□□□ -0.61
IFT20-202ENST00000357896 OR5AP2Q8NGF4 316 aa11.27□□□□□ -0.61
IFT20-202ENST00000357896 NIPSNAP3BQ9BS92 247 aa11.27□□□□□ -0.61
IFT20-202ENST00000357896 VCXQ9H320 206 aa11.27□□□□□ -0.61
IFT20-202ENST00000357896 DAPK2Q9UIK4 370 aa11.27□□□□□ -0.61
IFT20-202ENST00000357896 NOTOA8MTQ0 251 aa11.26□□□□□ -0.61
IFT20-202ENST00000357896 SNRPD3P62318 126 aaKnown RBP11.26□□□□□ -0.61
IFT20-202ENST00000357896 PRCDQ00LT1 54 aa11.26□□□□□ -0.61
IFT20-202ENST00000357896 OXA1LQ15070 435 aa11.26□□□□□ -0.61
IFT20-202ENST00000357896 PRSS48Q7RTY5 328 aa11.26□□□□□ -0.61
IFT20-202ENST00000357896 OR4A16Q8NH70 328 aa11.26□□□□□ -0.61
IFT20-202ENST00000357896 DKK2Q9UBU2 259 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms