RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 SMIM6P0DI80 62 aa14.27□□□□□ -0.13
CDK11A-202ENST00000356937 RNASE2P10153 161 aaKnown RBP14.27□□□□□ -0.13
CDK11A-202ENST00000356937 AREGP15514 252 aa14.27□□□□□ -0.13
CDK11A-202ENST00000356937 TMEM88Q6PEY1 159 aa14.27□□□□□ -0.13
CDK11A-202ENST00000356937 ABHD5Q8WTS1 349 aa14.27□□□□□ -0.13
CDK11A-202ENST00000356937 MXRA5Q9NR99 2828 aa14.26□□□□□ -0.13
CDK11A-202ENST00000356937 TEX22C9J3V5 150 aa14.26□□□□□ -0.13
CDK11A-202ENST00000356937 INS-IGF2F8WCM5 200 aa14.26□□□□□ -0.13
CDK11A-202ENST00000356937 IFNA5P01569 189 aa14.26□□□□□ -0.13
CDK11A-202ENST00000356937 CX3CL1P78423 397 aa14.26□□□□□ -0.13
CDK11A-202ENST00000356937 FLNBO75369 2602 aaKnown RBP14.26□□□□□ -0.13
CDK11A-202ENST00000356937 UBE2L5PA0A1B0GUS4 154 aa14.26□□□□□ -0.13
CDK11A-202ENST00000356937 FAM209BQ5JX69 171 aa14.26□□□□□ -0.13
CDK11A-202ENST00000356937 ZNF562Q6V9R5 426 aa14.26□□□□□ -0.13
CDK11A-202ENST00000356937 IL17RELQ6ZVW7 336 aa14.26□□□□□ -0.13
CDK11A-202ENST00000356937 MRPL41Q8IXM3 137 aaKnown RBP14.26□□□□□ -0.13
CDK11A-202ENST00000356937 RBM14Q96PK6 669 aaKnown RBP14.26□□□□□ -0.13
CDK11A-202ENST00000356937 SH2D7A6NKC9 451 aaPredicted RBP14.25□□□□□ -0.13
CDK11A-202ENST00000356937 S100A8P05109 93 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 GUCA2BQ16661 112 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 BSXQ3C1V8 233 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 C2orf83Q53S99 150 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 C19orf35Q6ZS72 473 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 P2RX4Q99571 388 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 GINS3Q9BRX5 216 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 SH3BGRL3Q9H299 93 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 ARV1Q9H2C2 271 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 RFNGQ9Y644 331 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 LINC00587B1AMM8 73 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 SPP1P10451 314 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 ADCYAP1P18509 176 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 RUNX1Q01196 453 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 ATP6V1FQ16864 119 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 CBLN2Q8IUK8 224 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 TMEM147Q9BVK8 224 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 UQCC1Q9NVA1 299 aa14.25□□□□□ -0.13
CDK11A-202ENST00000356937 SMCO3A2RU48 225 aa14.24□□□□□ -0.13
CDK11A-202ENST00000356937 PRSS46E5RG02 174 aa14.24□□□□□ -0.13
CDK11A-202ENST00000356937 NDPQ00604 133 aa14.24□□□□□ -0.13
CDK11A-202ENST00000356937 SCGB1C1Q8TD33 95 aa14.24□□□□□ -0.13
CDK11A-202ENST00000356937 ARPC1AQ92747 370 aa14.24□□□□□ -0.13
CDK11A-202ENST00000356937 MOB4Q9Y3A3 225 aa14.24□□□□□ -0.13
CDK11A-202ENST00000356937 IGHV7-81A0A0B4J1V7 117 aa14.24□□□□□ -0.13
CDK11A-202ENST00000356937 FGF16O43320 207 aa14.24□□□□□ -0.13
CDK11A-202ENST00000356937 EIF3GO75821 320 aaKnown RBP eCLIP14.24□□□□□ -0.13
CDK11A-202ENST00000356937 SCAF4O95104 1147 aaKnown RBP14.24□□□□□ -0.13
CDK11A-202ENST00000356937 FABP1P07148 127 aa14.24□□□□□ -0.13
CDK11A-202ENST00000356937 ATP6V0CP27449 155 aa14.24□□□□□ -0.13
CDK11A-202ENST00000356937 SUB1P53999 127 aaKnown RBP eCLIP14.24□□□□□ -0.13
CDK11A-202ENST00000356937 KRTAP1-1Q07627 177 aa14.24□□□□□ -0.13
CDK11A-202ENST00000356937 SPNS3Q6ZMD2 512 aa14.24□□□□□ -0.13
CDK11A-202ENST00000356937 C5orf56Q8N8D9 126 aa14.24□□□□□ -0.13
CDK11A-202ENST00000356937 HSPB9Q9BQS6 159 aa14.24□□□□□ -0.13
CDK11A-202ENST00000356937 HLA-DRB1P01911 266 aa14.23□□□□□ -0.13
CDK11A-202ENST00000356937 FOLR2P14207 255 aa14.23□□□□□ -0.13
CDK11A-202ENST00000356937 ATP5IP56385 69 aaPredicted RBP14.23□□□□□ -0.13
CDK11A-202ENST00000356937 EIF5AL1Q6IS14 154 aaKnown RBP14.23□□□□□ -0.13
CDK11A-202ENST00000356937 A6NDX4 124 aa14.22□□□□□ -0.13
CDK11A-202ENST00000356937 CD5LO43866 347 aa14.22□□□□□ -0.13
CDK11A-202ENST00000356937 CRYBA1P05813 215 aa14.22□□□□□ -0.13
CDK11A-202ENST00000356937 YAE1D1Q9NRH1 226 aa14.22□□□□□ -0.13
CDK11A-202ENST00000356937 TNFRSF19Q9NS68 423 aa14.22□□□□□ -0.13
CDK11A-202ENST00000356937 IGHV4-59P01825 116 aa14.22□□□□□ -0.13
CDK11A-202ENST00000356937 MLANAQ16655 118 aa14.22□□□□□ -0.13
CDK11A-202ENST00000356937 ZNF600Q6ZNG1 722 aa14.22□□□□□ -0.13
CDK11A-202ENST00000356937 C9orf139Q6ZV77 190 aa14.22□□□□□ -0.13
CDK11A-202ENST00000356937 RSG1Q9BU20 258 aa14.22□□□□□ -0.13
CDK11A-202ENST00000356937 SEC11CQ9BY50 192 aa14.22□□□□□ -0.13
CDK11A-202ENST00000356937 WDR61Q9GZS3 305 aaKnown RBP14.22□□□□□ -0.13
CDK11A-202ENST00000356937 FBXO7Q9Y3I1 522 aa14.22□□□□□ -0.13
CDK11A-202ENST00000356937 BLOC1S1P78537 153 aa14.21□□□□□ -0.13
CDK11A-202ENST00000356937 DLK1P80370 383 aa14.21□□□□□ -0.13
CDK11A-202ENST00000356937 GSN-AS1Q9NRJ2 163 aa14.21□□□□□ -0.13
CDK11A-202ENST00000356937 PITPNC1Q9UKF7 332 aa14.21□□□□□ -0.13
CDK11A-202ENST00000356937 S100A9P06702 114 aaKnown RBP14.21□□□□□ -0.14
CDK11A-202ENST00000356937 FGF7P21781 194 aa14.21□□□□□ -0.14
CDK11A-202ENST00000356937 VWC2Q2TAL6 325 aa14.21□□□□□ -0.14
CDK11A-202ENST00000356937 ARSJQ5FYB0 599 aaPredicted RBP14.21□□□□□ -0.14
CDK11A-202ENST00000356937 OR2G3Q8NGZ4 309 aa14.21□□□□□ -0.14
CDK11A-202ENST00000356937 TAF15Q92804 592 aaKnown RBP eCLIP14.21□□□□□ -0.14
CDK11A-202ENST00000356937 PARP11Q9NR21 331 aa14.21□□□□□ -0.14
CDK11A-202ENST00000356937 PLA2G2EQ9NZK7 142 aa14.21□□□□□ -0.14
CDK11A-202ENST00000356937 OTOGQ6ZRI0 2925 aa14.21□□□□□ -0.14
CDK11A-202ENST00000356937 AMY1AP04745 511 aa14.2□□□□□ -0.14
CDK11A-202ENST00000356937 SEC11BP0C7V7 166 aa14.2□□□□□ -0.14
CDK11A-202ENST00000356937 IER3P46695 156 aa14.2□□□□□ -0.14
CDK11A-202ENST00000356937 MFAP2P55001 183 aa14.2□□□□□ -0.14
CDK11A-202ENST00000356937 LFNGQ8NES3 379 aa14.2□□□□□ -0.14
CDK11A-202ENST00000356937 RXFP4Q8TDU9 374 aa14.2□□□□□ -0.14
CDK11A-202ENST00000356937 GNPNAT1Q96EK6 184 aaPredicted RBP14.2□□□□□ -0.14
CDK11A-202ENST00000356937 MISP3Q96FF7 219 aa14.2□□□□□ -0.14
CDK11A-202ENST00000356937 ZNF48Q96MX3 618 aaPredicted RBP14.2□□□□□ -0.14
CDK11A-202ENST00000356937 SRSF8Q9BRL6 282 aaKnown RBP14.2□□□□□ -0.14
CDK11A-202ENST00000356937 GGACTQ9BVM4 153 aa14.2□□□□□ -0.14
CDK11A-202ENST00000356937 DEFA4P12838 97 aa14.2□□□□□ -0.14
CDK11A-202ENST00000356937 OPRK1P41145 380 aa14.2□□□□□ -0.14
CDK11A-202ENST00000356937 C9orf152Q5JTZ5 239 aa14.2□□□□□ -0.14
CDK11A-202ENST00000356937 TMEM182Q6ZP80 229 aaPredicted RBP14.2□□□□□ -0.14
CDK11A-202ENST00000356937 ZNF114Q8NC26 417 aa14.2□□□□□ -0.14
CDK11A-202ENST00000356937 OR1P1Q8NH06 330 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms