RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 RPH3ALQ9UNE2 315 aa11.09□□□□□ -0.63
LSS-201ENST00000356396 SAA4P35542 130 aa11.09□□□□□ -0.63
LSS-201ENST00000356396 SOHLH1Q5JUK2 328 aa11.09□□□□□ -0.63
LSS-201ENST00000356396 FAM24BQ8N5W8 94 aa11.09□□□□□ -0.63
LSS-201ENST00000356396 TNFRSF14Q92956 283 aa11.09□□□□□ -0.63
LSS-201ENST00000356396 TMEM186Q96B77 213 aa11.09□□□□□ -0.63
LSS-201ENST00000356396 A0A1W2PPH5 198 aa11.08□□□□□ -0.64
LSS-201ENST00000356396 RAB19A4D1S5 217 aa11.08□□□□□ -0.64
LSS-201ENST00000356396 PRSS46E5RG02 174 aa11.08□□□□□ -0.64
LSS-201ENST00000356396 PYYP10082 97 aa11.08□□□□□ -0.64
LSS-201ENST00000356396 IL17RELQ6ZVW7 336 aa11.08□□□□□ -0.64
LSS-201ENST00000356396 Q71RC1 249 aaPredicted RBP11.08□□□□□ -0.64
LSS-201ENST00000356396 NHLRC2Q8NBF2 726 aa11.08□□□□□ -0.64
LSS-201ENST00000356396 LFNGQ8NES3 379 aa11.08□□□□□ -0.64
LSS-201ENST00000356396 MS4A10Q96PG2 267 aa11.08□□□□□ -0.64
LSS-201ENST00000356396 LINC00574Q9H8X3 128 aa11.08□□□□□ -0.64
LSS-201ENST00000356396 UNKLQ9H9P5 680 aaKnown RBP11.08□□□□□ -0.64
LSS-201ENST00000356396 IGHV2-5P01817 119 aa11.08□□□□□ -0.64
LSS-201ENST00000356396 A0A1W2PPV4 95 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 VENTXO95231 258 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 HOXB4P17483 251 aaPredicted RBP11.07□□□□□ -0.64
LSS-201ENST00000356396 PRRX1P54821 245 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 PRCDQ00LT1 54 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 TLE4Q04727 773 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 FOXA2Q9Y261 457 aaPredicted RBP11.07□□□□□ -0.64
LSS-201ENST00000356396 SIGLEC9Q9Y336 463 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 NDUFA2O43678 99 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 OR5G3P0C626 314 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 TMEM41BQ5BJD5 291 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 IL34Q6ZMJ4 242 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 PPP1R27Q86WC6 154 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 CLRN3Q8NCR9 226 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 LINC00479Q96M42 142 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 TBX15Q96SF7 602 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 NDUFA4L2Q9NRX3 87 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 PDZD2O15018 2839 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 IGHV3-49A0A0A0MS15 119 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 C7orf77A4D0Y5 90 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 FAM90A26D6RGX4 464 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 G3V318 75 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 TRIM77I1YAP6 450 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 RBFOX2O43251 390 aaKnown RBP eCLIP11.07□□□□□ -0.645e-7■■■□□ 18.7
LSS-201ENST00000356396 CDC34P49427 236 aaPredicted RBP11.07□□□□□ -0.64
LSS-201ENST00000356396 Q6ZS46 218 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 FAM168AQ92567 244 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 MED9Q9NWA0 146 aa11.07□□□□□ -0.64
LSS-201ENST00000356396 H3BQ15 152 aa11.06□□□□□ -0.64
LSS-201ENST00000356396 SRP19P09132 144 aaKnown RBP11.06□□□□□ -0.64
LSS-201ENST00000356396 ECSCRQ19T08 205 aa11.06□□□□□ -0.64
LSS-201ENST00000356396 SRSF12Q8WXF0 261 aaKnown RBP11.06□□□□□ -0.64
LSS-201ENST00000356396 CIB3Q96Q77 187 aaPredicted RBP11.06□□□□□ -0.64
LSS-201ENST00000356396 DPM3Q9P2X0 92 aa11.06□□□□□ -0.64
LSS-201ENST00000356396 WDR83OSQ9Y284 106 aa11.06□□□□□ -0.64
LSS-201ENST00000356396 OR7C2O60412 319 aa11.06□□□□□ -0.64
LSS-201ENST00000356396 NPPCP23582 126 aa11.06□□□□□ -0.64
LSS-201ENST00000356396 TPTE2P1Q5T6R2 138 aa11.06□□□□□ -0.64
LSS-201ENST00000356396 SVBPQ8N300 66 aa11.06□□□□□ -0.64
LSS-201ENST00000356396 EIF4E3Q8N5X7 224 aaKnown RBP11.06□□□□□ -0.64
LSS-201ENST00000356396 OR1L8Q8NGR8 309 aa11.06□□□□□ -0.64
LSS-201ENST00000356396 HSPB9Q9BQS6 159 aa11.06□□□□□ -0.64
LSS-201ENST00000356396 ZNF355PQ9NSJ1 428 aa11.06□□□□□ -0.64
LSS-201ENST00000356396 CTRB1P17538 263 aa11.05□□□□□ -0.64
LSS-201ENST00000356396 CD81P60033 236 aa11.05□□□□□ -0.64
LSS-201ENST00000356396 TMEM177Q53S58 311 aa11.05□□□□□ -0.64
LSS-201ENST00000356396 CTRB2Q6GPI1 263 aa11.05□□□□□ -0.64
LSS-201ENST00000356396 ZNF429Q86V71 674 aa11.05□□□□□ -0.64
LSS-201ENST00000356396 BLNKQ8WV28 456 aa11.05□□□□□ -0.64
LSS-201ENST00000356396 NEU4Q8WWR8 484 aaPredicted RBP11.05□□□□□ -0.64
LSS-201ENST00000356396 TMEM37Q8WXS4 190 aa11.05□□□□□ -0.64
LSS-201ENST00000356396 RAB39BQ96DA2 213 aa11.05□□□□□ -0.64
LSS-201ENST00000356396 SLC35B3Q9H1N7 401 aa11.05□□□□□ -0.64
LSS-201ENST00000356396 PRNDQ9UKY0 176 aa11.05□□□□□ -0.64
LSS-201ENST00000356396 RPL27AP46776 148 aaKnown RBP11.05□□□□□ -0.64
LSS-201ENST00000356396 TEPPQ6URK8 271 aa11.05□□□□□ -0.64
LSS-201ENST00000356396 ZNF114Q8NC26 417 aa11.05□□□□□ -0.64
LSS-201ENST00000356396 LYPD6BQ8NI32 183 aa11.05□□□□□ -0.64
LSS-201ENST00000356396 OSR1Q8TAX0 266 aaPredicted RBP11.05□□□□□ -0.64
LSS-201ENST00000356396 ADTRPQ96IZ2 230 aa11.05□□□□□ -0.64
LSS-201ENST00000356396 TRBV23-1A0A0A0MS06 115 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 IGHV3-66A0A0C4DH42 116 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 IGLC7A0M8Q6 106 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 TSPAN9O75954 239 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 RBP4P02753 201 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 HABP2Q14520 560 aaPredicted RBP11.04□□□□□ -0.64
LSS-201ENST00000356396 ADIRFQ15847 76 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 PRSS8Q16651 343 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 VMA21Q3ZAQ7 101 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 HIVEP2P31629 2446 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 RNF223E7ERA6 249 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 PEA15Q15121 130 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 TMEM95Q3KNT9 176 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.04□□□□□ -0.64
LSS-201ENST00000356396 OR1B1Q8NGR6 318 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 NPVFQ9HCQ7 196 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 SSTP61278 116 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 DLK1P80370 383 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 FXYD3Q14802 87 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 WNT10AQ9GZT5 417 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 RAB9BQ9NP90 201 aa11.04□□□□□ -0.64
LSS-201ENST00000356396 BET1LQ9NYM9 111 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms