RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PRR20EP86478 221 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 PRR20CP86479 221 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 PRR20DP86480 221 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 PRR20BP86481 221 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 PRR20AP86496 221 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 CT45A1Q5HYN5 189 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 TRAT1Q6PIZ9 186 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 SPATA12Q7Z6I5 190 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 ZNF439Q8NDP4 499 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 CT45A3Q8NHU0 189 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 C18orf32Q8TCD1 76 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 TXNDC17Q9BRA2 123 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 OR51B2Q9Y5P1 312 aa8.3□□□□□ -1.08
PTPRA-203ENST00000356147 H3BTX0 84 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 AMY1AP04745 511 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 AREGP15514 252 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 FOXA3P55318 350 aaPredicted RBP8.29□□□□□ -1.08
PTPRA-203ENST00000356147 EBLN2Q6P2I7 272 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 OR2T6Q8NHC8 308 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 ZNF331Q9NQX6 463 aaPredicted RBP8.29□□□□□ -1.08
PTPRA-203ENST00000356147 IDI2-AS1Q9NZ38 188 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 DSCAMO60469 2012 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 J3QR06 171 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 MMP23AO75900 390 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 TSPOP30536 169 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 TMPRSS3P57727 454 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 HSPE1P61604 102 aaKnown RBP8.29□□□□□ -1.08
PTPRA-203ENST00000356147 GNG5P63218 68 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 MOGAT3Q86VF5 341 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 TCTEX1D1Q8N7M0 179 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 PPP1R14DQ9NXH3 145 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 SRRM4A7MD48 611 aaKnown RBP8.29□□□□□ -1.08
PTPRA-203ENST00000356147 KLRC4-KLRK1H3BQV0 150 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 M0R2Z0 102 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 SPRY3O43610 288 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 HOXC12P31275 282 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 CEACAM8P31997 349 aaPredicted RBP8.29□□□□□ -1.08
PTPRA-203ENST00000356147 STUMQ69YW2 141 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 FAM90A1Q86YD7 464 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 SPACA3Q8IXA5 215 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 CALYQ9NYX4 217 aa8.29□□□□□ -1.08
PTPRA-203ENST00000356147 CNOT1A5YKK6 2376 aaKnown RBP8.29□□□□□ -1.08
PTPRA-203ENST00000356147 EP300Q09472 2414 aaPredicted RBP8.28□□□□□ -1.08
PTPRA-203ENST00000356147 IGLL1P15814 213 aa8.28□□□□□ -1.08
PTPRA-203ENST00000356147 REG1BP48304 166 aa8.28□□□□□ -1.08
PTPRA-203ENST00000356147 UBE2L3P68036 154 aaKnown RBP8.28□□□□□ -1.08
PTPRA-203ENST00000356147 WDR73Q6P4I2 378 aa8.28□□□□□ -1.08
PTPRA-203ENST00000356147 LINC00173Q6ZV60 143 aa8.28□□□□□ -1.08
PTPRA-203ENST00000356147 WDR31Q8NA23 367 aa8.28□□□□□ -1.08
PTPRA-203ENST00000356147 OR4S2Q8NH73 311 aa8.28□□□□□ -1.08
PTPRA-203ENST00000356147 ZC2HC1AQ96GY0 325 aa8.28□□□□□ -1.08
PTPRA-203ENST00000356147 TNFSF15O95150 251 aa8.28□□□□□ -1.08
PTPRA-203ENST00000356147 GCSAMQ8N6F7 178 aa8.28□□□□□ -1.08
PTPRA-203ENST00000356147 OR2D3Q8NGH3 330 aa8.28□□□□□ -1.08
PTPRA-203ENST00000356147 ASCL3Q9NQ33 180 aa8.28□□□□□ -1.08
PTPRA-203ENST00000356147 KLF13Q9Y2Y9 288 aaPredicted RBP8.28□□□□□ -1.08
PTPRA-203ENST00000356147 LOC102724200A0A096LPH7 203 aaPredicted RBP8.27□□□□□ -1.08
PTPRA-203ENST00000356147 APELAP0DMC3 54 aa8.27□□□□□ -1.08
PTPRA-203ENST00000356147 OR10J3Q5JRS4 329 aa8.27□□□□□ -1.08
PTPRA-203ENST00000356147 ETFRF1Q6IPR1 90 aa8.27□□□□□ -1.08
PTPRA-203ENST00000356147 TRAV9-1A0A075B6T8 112 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 TCF24Q7RTU0 167 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 PRR7Q8TB68 274 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 OR2V2Q96R30 315 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 OR8B2Q96RD0 313 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 PMCHL2Q9BQD1 86 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 OSTCQ9NRP0 149 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 JPT1Q9UK76 154 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 PCNX1Q96RV3 2341 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 TRBV9A0A0B4J1U6 114 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 VWC2LB2RUY7 222 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 E7EUB6 86 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 ISLRO14498 428 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 TOX4O94842 621 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 HLA-DQA1P01909 254 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 MT-ND6P03923 174 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 ZNF137PP52743 207 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 C10orf55Q5SWW7 151 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 NUP35Q8NFH5 326 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 BLNKQ8WV28 456 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 DDB2Q92466 427 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 NEUROG1Q92886 237 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 TMEM167BQ9NRX6 74 aa8.27□□□□□ -1.09
PTPRA-203ENST00000356147 hDV102S1A0JD36 115 aa8.26□□□□□ -1.09
PTPRA-203ENST00000356147 PPOXP50336 477 aa8.26□□□□□ -1.09
PTPRA-203ENST00000356147 ZNF138P52744 262 aa8.26□□□□□ -1.09
PTPRA-203ENST00000356147 SRSF6Q13247 344 aaKnown RBP8.26□□□□□ -1.09
PTPRA-203ENST00000356147 AARDQ4LEZ3 155 aa8.26□□□□□ -1.09
PTPRA-203ENST00000356147 MDS2Q8NDY4 140 aa8.26□□□□□ -1.09
PTPRA-203ENST00000356147 IGF2BP2-AS1Q96M15 143 aa8.26□□□□□ -1.09
PTPRA-203ENST00000356147 TMEM14BQ9NUH8 114 aa8.26□□□□□ -1.09
PTPRA-203ENST00000356147 IGHV3-21A0A0B4J1V1 117 aa8.26□□□□□ -1.09
PTPRA-203ENST00000356147 SMIM27A0A1W2PRY6 76 aa8.26□□□□□ -1.09
PTPRA-203ENST00000356147 FAM181BA6NEQ2 426 aa8.26□□□□□ -1.09
PTPRA-203ENST00000356147 LAMTOR5O43504 91 aa8.26□□□□□ -1.09
PTPRA-203ENST00000356147 C17orf58Q2M2W7 97 aa8.26□□□□□ -1.09
PTPRA-203ENST00000356147 NUDT10Q8NFP7 164 aa8.26□□□□□ -1.09
PTPRA-203ENST00000356147 NUDT11Q96G61 164 aa8.26□□□□□ -1.09
PTPRA-203ENST00000356147 ASCL2Q99929 193 aa8.26□□□□□ -1.09
PTPRA-203ENST00000356147 HIGD1CA8MV81 97 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms