RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 MED28Q9H204 178 aa12.05□□□□□ -0.48
TRIM13-201ENST00000356017 GNB4Q9HAV0 340 aa12.05□□□□□ -0.48
TRIM13-201ENST00000356017 TRBV7-1A0A0A6YYK4 115 aa12.04□□□□□ -0.48
TRIM13-201ENST00000356017 IGHV3-11P01762 117 aa12.04□□□□□ -0.48
TRIM13-201ENST00000356017 MBPP02686 304 aaPredicted RBP12.04□□□□□ -0.48
TRIM13-201ENST00000356017 NPY1RP25929 384 aa12.04□□□□□ -0.48
TRIM13-201ENST00000356017 EXOSC2Q13868 293 aaKnown RBP12.04□□□□□ -0.48
TRIM13-201ENST00000356017 PVRIGQ6DKI7 326 aa12.04□□□□□ -0.48
TRIM13-201ENST00000356017 C8orf86Q6ZUL3 223 aa12.04□□□□□ -0.48
TRIM13-201ENST00000356017 MISP3Q96FF7 219 aa12.04□□□□□ -0.48
TRIM13-201ENST00000356017 OR5B12Q96R08 314 aa12.04□□□□□ -0.48
TRIM13-201ENST00000356017 RAB40CQ96S21 281 aa12.04□□□□□ -0.48
TRIM13-201ENST00000356017 NMES1Q9C002 83 aa12.04□□□□□ -0.48
TRIM13-201ENST00000356017 MGAT4CQ9UBM8 478 aa12.04□□□□□ -0.48
TRIM13-201ENST00000356017 IAPPP10997 89 aa12.04□□□□□ -0.48
TRIM13-201ENST00000356017 DEFA5Q01523 94 aa12.04□□□□□ -0.48
TRIM13-201ENST00000356017 IL15RAQ13261 267 aa12.04□□□□□ -0.48
TRIM13-201ENST00000356017 C18orf65Q6ZTR6 163 aa12.04□□□□□ -0.48
TRIM13-201ENST00000356017 RNASEH2CQ8TDP1 164 aaKnown RBP12.04□□□□□ -0.48
TRIM13-201ENST00000356017 STAB1Q9NY15 2570 aa12.03□□□□□ -0.48
TRIM13-201ENST00000356017 SSSCA1O60232 199 aa12.03□□□□□ -0.48
TRIM13-201ENST00000356017 SIX6O95475 246 aa12.03□□□□□ -0.48
TRIM13-201ENST00000356017 H2BFSP57053 126 aa12.03□□□□□ -0.48
TRIM13-201ENST00000356017 TAS2R30P59541 319 aa12.03□□□□□ -0.48
TRIM13-201ENST00000356017 RAB11AP62491 216 aa12.03□□□□□ -0.48
TRIM13-201ENST00000356017 SMIM8Q96KF7 97 aa12.03□□□□□ -0.48
TRIM13-201ENST00000356017 ATP6V0BQ99437 205 aa12.03□□□□□ -0.48
TRIM13-201ENST00000356017 RANGRFQ9HD47 186 aaPredicted RBP12.03□□□□□ -0.48
TRIM13-201ENST00000356017 PEF1Q9UBV8 284 aaKnown RBP12.03□□□□□ -0.48
TRIM13-201ENST00000356017 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.02□□□□□ -0.49
TRIM13-201ENST00000356017 K7EIM0 57 aa12.02□□□□□ -0.49
TRIM13-201ENST00000356017 CCL24O00175 119 aa12.02□□□□□ -0.49
TRIM13-201ENST00000356017 MT-CO2P00403 227 aa12.02□□□□□ -0.49
TRIM13-201ENST00000356017 HSPB1P04792 205 aaKnown RBP12.02□□□□□ -0.49
TRIM13-201ENST00000356017 PVALBP20472 110 aaPredicted RBP12.02□□□□□ -0.49
TRIM13-201ENST00000356017 MYCNOSP40205 109 aa12.02□□□□□ -0.49
TRIM13-201ENST00000356017 OR11H1Q8NG94 326 aa12.02□□□□□ -0.49
TRIM13-201ENST00000356017 OR1N2Q8NGR9 330 aa12.02□□□□□ -0.49
TRIM13-201ENST00000356017 SCARB1Q8WTV0 552 aa12.02□□□□□ -0.49
TRIM13-201ENST00000356017 PINX1Q96BK5 328 aaKnown RBP12.02□□□□□ -0.49
TRIM13-201ENST00000356017 NEURL2Q9BR09 285 aa12.02□□□□□ -0.49
TRIM13-201ENST00000356017 GAR1Q9NY12 217 aaKnown RBP12.02□□□□□ -0.49
TRIM13-201ENST00000356017 RPS10-NUDT3A0A1W2PQS6 291 aa12.01□□□□□ -0.49
TRIM13-201ENST00000356017 I3L2K1 104 aa12.01□□□□□ -0.49
TRIM13-201ENST00000356017 L7N2F9 121 aa12.01□□□□□ -0.49
TRIM13-201ENST00000356017 PF4P02776 101 aa12.01□□□□□ -0.49
TRIM13-201ENST00000356017 IFNA4P05014 189 aa12.01□□□□□ -0.49
TRIM13-201ENST00000356017 OPRK1P41145 380 aa12.01□□□□□ -0.49
TRIM13-201ENST00000356017 RRAS2P62070 204 aaPredicted RBP12.01□□□□□ -0.49
TRIM13-201ENST00000356017 VAMP2P63027 116 aa12.01□□□□□ -0.49
TRIM13-201ENST00000356017 ZNF616Q08AN1 781 aa12.01□□□□□ -0.49
TRIM13-201ENST00000356017 SPANXN5Q5MJ07 72 aa12.01□□□□□ -0.49
TRIM13-201ENST00000356017 ETFRF1Q6IPR1 90 aa12.01□□□□□ -0.49
TRIM13-201ENST00000356017 DPF1Q92782 380 aa12.01□□□□□ -0.49
TRIM13-201ENST00000356017 RAX2Q96IS3 184 aa12.01□□□□□ -0.49
TRIM13-201ENST00000356017 C21orf62Q9NYP8 219 aa12.01□□□□□ -0.49
TRIM13-201ENST00000356017 PSENENQ9NZ42 101 aa12.01□□□□□ -0.49
TRIM13-201ENST00000356017 RCL1Q9Y2P8 373 aaKnown RBP12.01□□□□□ -0.49
TRIM13-201ENST00000356017 STRAPQ9Y3F4 350 aaKnown RBP12.01□□□□□ -0.49
TRIM13-201ENST00000356017 LSM5Q9Y4Y9 91 aaKnown RBP12.01□□□□□ -0.49
TRIM13-201ENST00000356017 ANKRD34BA5PLL1 514 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 MFSD2BA6NFX1 497 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 K7EPK0 472 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 RLN2P04090 185 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 OR8U8P0C7N1 319 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 S100A10P60903 97 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 RAB32Q13637 225 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 DEFB136Q30KP8 78 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 C11orf87Q6NUJ2 197 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 ZNF502Q8TBZ5 544 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 TMEM170AQ8WVE7 144 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 ASB13Q8WXK3 278 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 TXN2Q99757 166 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 LINC01619G3V211 115 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 TSC22D2O75157 780 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 CLEC3BP05452 202 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 PET100P0DJ07 73 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 ZP3P21754 424 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 FCGR2BP31994 310 aaPredicted RBP12□□□□□ -0.49
TRIM13-201ENST00000356017 MFAP4P55083 255 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 FHL3Q13643 280 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 FCN2Q15485 313 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 CLEC19AQ6UXS0 136 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 CCDC140Q96MF4 163 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 PAIP2BQ9ULR5 123 aaKnown RBP12□□□□□ -0.49
TRIM13-201ENST00000356017 S4R3C0 116 aa12□□□□□ -0.49
TRIM13-201ENST00000356017 IGHV3-21A0A0B4J1V1 117 aa11.99□□□□□ -0.49
TRIM13-201ENST00000356017 C15orf62A8K5M9 175 aa11.99□□□□□ -0.49
TRIM13-201ENST00000356017 BOLA2-SMG1P6H3BVE0 249 aa11.99□□□□□ -0.49
TRIM13-201ENST00000356017 SLC25A4P12235 298 aa11.99□□□□□ -0.49
TRIM13-201ENST00000356017 CXCL3P19876 107 aa11.99□□□□□ -0.49
TRIM13-201ENST00000356017 NPBWR1P48145 328 aa11.99□□□□□ -0.49
TRIM13-201ENST00000356017 PAX9P55771 341 aa11.99□□□□□ -0.49
TRIM13-201ENST00000356017 CD300CQ08708 224 aa11.99□□□□□ -0.49
TRIM13-201ENST00000356017 ETV3LQ6ZN32 361 aa11.99□□□□□ -0.49
TRIM13-201ENST00000356017 OR11H7Q8NGC8 314 aa11.99□□□□□ -0.49
TRIM13-201ENST00000356017 PPP1R1CQ8WVI7 109 aa11.99□□□□□ -0.49
TRIM13-201ENST00000356017 BSCL2Q96G97 398 aaPredicted RBP11.99□□□□□ -0.49
TRIM13-201ENST00000356017 ANK2Q01484 3957 aa11.98□□□□□ -0.49
TRIM13-201ENST00000356017 IGHV4OR15-8A0A075B7B6 117 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms