RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 C18orf15Q96N68 181 aa12.95□□□□□ -0.34
RTN3-205ENST00000356000 IDI2-AS1Q9NZ38 188 aa12.95□□□□□ -0.34
RTN3-205ENST00000356000 G6PCP35575 357 aa12.95□□□□□ -0.34
RTN3-205ENST00000356000 FGF12P61328 243 aa12.95□□□□□ -0.34
RTN3-205ENST00000356000 EFNB3Q15768 340 aa12.95□□□□□ -0.34
RTN3-205ENST00000356000 PLA2G2FQ9BZM2 168 aa12.95□□□□□ -0.34
RTN3-205ENST00000356000 A0A1W2PP55 124 aa12.94□□□□□ -0.34
RTN3-205ENST00000356000 CAMPP49913 170 aa12.94□□□□□ -0.34
RTN3-205ENST00000356000 C10orf128Q5T292 105 aa12.94□□□□□ -0.34
RTN3-205ENST00000356000 FAM231DQ6ZW35 169 aa12.94□□□□□ -0.34
RTN3-205ENST00000356000 TMEM54Q969K7 222 aa12.94□□□□□ -0.34
RTN3-205ENST00000356000 HS3ST6Q96QI5 342 aa12.94□□□□□ -0.34
RTN3-205ENST00000356000 CDIP1Q9H305 208 aa12.94□□□□□ -0.34
RTN3-205ENST00000356000 DEC1Q9P2X7 70 aa12.94□□□□□ -0.34
RTN3-205ENST00000356000 INSIG2Q9Y5U4 225 aa12.94□□□□□ -0.34
RTN3-205ENST00000356000 A0A1W2PQU0 124 aa12.94□□□□□ -0.34
RTN3-205ENST00000356000 TMEM8BA6NDV4 472 aa12.94□□□□□ -0.34
RTN3-205ENST00000356000 ZIC3O60481 467 aa12.94□□□□□ -0.34
RTN3-205ENST00000356000 RPL32P62910 135 aaKnown RBP12.94□□□□□ -0.34
RTN3-205ENST00000356000 SRSF6Q13247 344 aaKnown RBP12.94□□□□□ -0.34
RTN3-205ENST00000356000 RTL8BQ17RB0 113 aa12.94□□□□□ -0.34
RTN3-205ENST00000356000 ARPC1AQ92747 370 aa12.94□□□□□ -0.34
RTN3-205ENST00000356000 A0A1B0GW15 77 aa12.93□□□□□ -0.34
RTN3-205ENST00000356000 SYNGR1O43759 233 aa12.93□□□□□ -0.34
RTN3-205ENST00000356000 INSL3P51460 131 aa12.93□□□□□ -0.34
RTN3-205ENST00000356000 FOXA3P55318 350 aaPredicted RBP12.93□□□□□ -0.34
RTN3-205ENST00000356000 PIGCQ92535 297 aa12.93□□□□□ -0.34
RTN3-205ENST00000356000 ZNF355PQ9NSJ1 428 aa12.93□□□□□ -0.34
RTN3-205ENST00000356000 MPC1Q9Y5U8 109 aa12.93□□□□□ -0.34
RTN3-205ENST00000356000 ARHGEF17Q96PE2 2063 aaPredicted RBP12.93□□□□□ -0.34
RTN3-205ENST00000356000 SUMO3P55854 103 aaPredicted RBP12.93□□□□□ -0.34
RTN3-205ENST00000356000 Q6ZR03 302 aa12.93□□□□□ -0.34
RTN3-205ENST00000356000 FAM214BQ7L5A3 538 aa12.93□□□□□ -0.34
RTN3-205ENST00000356000 DRAM1Q8N682 238 aa12.93□□□□□ -0.34
RTN3-205ENST00000356000 IL1F10Q8WWZ1 152 aa12.93□□□□□ -0.34
RTN3-205ENST00000356000 PATE1Q8WXA2 126 aa12.93□□□□□ -0.34
RTN3-205ENST00000356000 B4GALT7Q9UBV7 327 aa12.93□□□□□ -0.34
RTN3-205ENST00000356000 hADV38S2A0JD32 116 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 B5MCH6 92 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 CNIH1O95406 144 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 OR1L3Q8NH93 324 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 C20orf78Q9BR46 151 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 NDFIP1Q9BT67 221 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 HINT2Q9BX68 163 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 hCG_38984A0A1B0GV85 526 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 KIR2DL2P43627 348 aaPredicted RBP12.92□□□□□ -0.34
RTN3-205ENST00000356000 KLRD1Q13241 179 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 GAB4Q2WGN9 574 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 ANKRD37Q7Z713 158 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 ZNF441Q8N8Z8 693 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 TSACCQ96A04 125 aaPredicted RBP12.92□□□□□ -0.34
RTN3-205ENST00000356000 DUSP13Q9UII6 198 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 TMEM150CB9EJG8 249 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 K7ESF4 209 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 MT-ATP8P03928 68 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 TAS2R45P59539 299 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 SPINK9Q5DT21 86 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 LCNL1Q6ZST4 164 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 SMIM20Q8N5G0 67 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 ZNF502Q8TBZ5 544 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 SNRNP40Q96DI7 357 aaKnown RBP12.92□□□□□ -0.34
RTN3-205ENST00000356000 ANAPC13Q9BS18 74 aa12.92□□□□□ -0.34
RTN3-205ENST00000356000 NCKAP5O14513 1909 aa12.91□□□□□ -0.34
RTN3-205ENST00000356000 COL8A2P25067 703 aa12.91□□□□□ -0.34
RTN3-205ENST00000356000 NTF4P34130 210 aa12.91□□□□□ -0.34
RTN3-205ENST00000356000 GPR12P47775 334 aa12.91□□□□□ -0.34
RTN3-205ENST00000356000 PHLDA1Q8WV24 401 aaPredicted RBP12.91□□□□□ -0.34
RTN3-205ENST00000356000 DDB2Q92466 427 aa12.91□□□□□ -0.34
RTN3-205ENST00000356000 TMEM167BQ9NRX6 74 aa12.91□□□□□ -0.34
RTN3-205ENST00000356000 COL5A1P20908 1838 aaPredicted RBP12.91□□□□□ -0.34
RTN3-205ENST00000356000 IGKV3D-11A0A0A0MRZ8 115 aa12.91□□□□□ -0.34
RTN3-205ENST00000356000 A0A1W2PNR3 127 aa12.91□□□□□ -0.34
RTN3-205ENST00000356000 ZNF716A6NP11 495 aa12.91□□□□□ -0.34
RTN3-205ENST00000356000 NKX2-8O15522 239 aa12.91□□□□□ -0.34
RTN3-205ENST00000356000 CER1O95813 267 aa12.91□□□□□ -0.34
RTN3-205ENST00000356000 ZNF747Q9BV97 191 aa12.91□□□□□ -0.34
RTN3-205ENST00000356000 SLC25A10Q9UBX3 287 aaPredicted RBP12.91□□□□□ -0.34
RTN3-205ENST00000356000 HIGD1CA8MV81 97 aa12.9□□□□□ -0.34
RTN3-205ENST00000356000 NCR2O95944 276 aa12.9□□□□□ -0.34
RTN3-205ENST00000356000 CT45A6P0DMU7 189 aa12.9□□□□□ -0.34
RTN3-205ENST00000356000 CT45A5P0DMU8 189 aa12.9□□□□□ -0.34
RTN3-205ENST00000356000 CT45A7P0DMV0 189 aa12.9□□□□□ -0.34
RTN3-205ENST00000356000 GABRG2P18507 467 aa12.9□□□□□ -0.34
RTN3-205ENST00000356000 TMPRSS3P57727 454 aa12.9□□□□□ -0.34
RTN3-205ENST00000356000 TMEM196Q5HYL7 178 aa12.9□□□□□ -0.34
RTN3-205ENST00000356000 CT45A1Q5HYN5 189 aa12.9□□□□□ -0.34
RTN3-205ENST00000356000 CT45A3Q8NHU0 189 aa12.9□□□□□ -0.34
RTN3-205ENST00000356000 RAX2Q96IS3 184 aa12.9□□□□□ -0.34
RTN3-205ENST00000356000 ZDBF2Q9HCK1 2354 aa12.9□□□□□ -0.34
RTN3-205ENST00000356000 E9PLD3 99 aa12.9□□□□□ -0.35
RTN3-205ENST00000356000 DHHO43323 396 aa12.9□□□□□ -0.35
RTN3-205ENST00000356000 SYNGR3O43761 229 aa12.9□□□□□ -0.35
RTN3-205ENST00000356000 VDAC2P45880 294 aaPredicted RBP12.9□□□□□ -0.35
RTN3-205ENST00000356000 HBBP68871 147 aa12.9□□□□□ -0.35
RTN3-205ENST00000356000 C2orf27AQ580R0 203 aa12.9□□□□□ -0.35
RTN3-205ENST00000356000 TMEM116Q8NCL8 245 aa12.9□□□□□ -0.35
RTN3-205ENST00000356000 SSMEM1Q8WWF3 244 aa12.9□□□□□ -0.35
RTN3-205ENST00000356000 TM2D2Q9BX73 214 aa12.9□□□□□ -0.35
RTN3-205ENST00000356000 METTL7AQ9H8H3 244 aa12.9□□□□□ -0.35
RTN3-205ENST00000356000 UFC1Q9Y3C8 167 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms