RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 TRGV8A0A0C4DH27 118 aa11.78□□□□□ -0.52
SREBF1-202ENST00000355815 A0A1B0GV72 72 aa11.78□□□□□ -0.52
SREBF1-202ENST00000355815 RNFT1Q5M7Z0 435 aa11.78□□□□□ -0.52
SREBF1-202ENST00000355815 BHLHA15Q7RTS1 189 aaPredicted RBP11.78□□□□□ -0.52
SREBF1-202ENST00000355815 CCL13Q99616 98 aa11.78□□□□□ -0.52
SREBF1-202ENST00000355815 COL25A1Q9BXS0 654 aaPredicted RBP11.78□□□□□ -0.52
SREBF1-202ENST00000355815 YLPM1P49750 1951 aaKnown RBP11.78□□□□□ -0.52
SREBF1-202ENST00000355815 C12orf77C9JDV5 145 aa11.78□□□□□ -0.52
SREBF1-202ENST00000355815 MKRN2OSH3BPM6 223 aa11.78□□□□□ -0.52
SREBF1-202ENST00000355815 IGHV1-2P23083 117 aa11.78□□□□□ -0.52
SREBF1-202ENST00000355815 OR8G5Q8NG78 346 aa11.78□□□□□ -0.52
SREBF1-202ENST00000355815 PRB3Q04118 309 aaPredicted RBP11.78□□□□□ -0.52
SREBF1-202ENST00000355815 MPV17L2Q567V2 206 aa11.78□□□□□ -0.52
SREBF1-202ENST00000355815 LOXL4Q96JB6 756 aa11.78□□□□□ -0.52
SREBF1-202ENST00000355815 HIST1H4GQ99525 98 aa11.78□□□□□ -0.52
SREBF1-202ENST00000355815 AP5S1Q9NUS5 200 aa11.78□□□□□ -0.52
SREBF1-202ENST00000355815 SPRR3Q9UBC9 169 aa11.78□□□□□ -0.52
SREBF1-202ENST00000355815 C17orf98A8MV24 154 aa11.77□□□□□ -0.52
SREBF1-202ENST00000355815 CA11O75493 328 aa11.77□□□□□ -0.52
SREBF1-202ENST00000355815 REG1AP05451 166 aa11.77□□□□□ -0.52
SREBF1-202ENST00000355815 CA7P43166 264 aa11.77□□□□□ -0.52
SREBF1-202ENST00000355815 ITLN1Q8WWA0 313 aa11.77□□□□□ -0.52
SREBF1-202ENST00000355815 EGLN1Q9GZT9 426 aa11.77□□□□□ -0.52
SREBF1-202ENST00000355815 TCF19Q9Y242 345 aa11.77□□□□□ -0.52
SREBF1-202ENST00000355815 TMEM210A6NLX4 147 aa11.77□□□□□ -0.52
SREBF1-202ENST00000355815 RAMP3O60896 148 aa11.77□□□□□ -0.52
SREBF1-202ENST00000355815 CKS2P33552 79 aa11.77□□□□□ -0.52
SREBF1-202ENST00000355815 FOXF2Q12947 444 aa11.77□□□□□ -0.52
SREBF1-202ENST00000355815 EAF1Q96JC9 268 aaPredicted RBP11.77□□□□□ -0.52
SREBF1-202ENST00000355815 M0QZ24 198 aa11.77□□□□□ -0.53
SREBF1-202ENST00000355815 PSG1P11464 419 aa11.77□□□□□ -0.53
SREBF1-202ENST00000355815 GZMHP20718 246 aa11.77□□□□□ -0.53
SREBF1-202ENST00000355815 INO80CQ6PI98 192 aaPredicted RBP11.77□□□□□ -0.53
SREBF1-202ENST00000355815 LSM10Q969L4 123 aaKnown RBP11.77□□□□□ -0.53
SREBF1-202ENST00000355815 POLR3KQ9Y2Y1 108 aaPredicted RBP11.77□□□□□ -0.53
SREBF1-202ENST00000355815 FAM208BQ5VWN6 2430 aa11.77□□□□□ -0.53
SREBF1-202ENST00000355815 ZNF324O75467 553 aaPredicted RBP11.77□□□□□ -0.53
SREBF1-202ENST00000355815 CD59P13987 128 aa11.77□□□□□ -0.53
SREBF1-202ENST00000355815 GAL3ST2Q9H3Q3 398 aa11.77□□□□□ -0.53
SREBF1-202ENST00000355815 A0A0G2JRQ6 117 aa11.76□□□□□ -0.53
SREBF1-202ENST00000355815 CEACAM18A8MTB9 384 aa11.76□□□□□ -0.53
SREBF1-202ENST00000355815 CECR9P0C854 216 aa11.76□□□□□ -0.53
SREBF1-202ENST00000355815 RND2P52198 227 aa11.76□□□□□ -0.53
SREBF1-202ENST00000355815 ID3Q02535 119 aa11.76□□□□□ -0.53
SREBF1-202ENST00000355815 MBNL2Q5VZF2 373 aaKnown RBP11.76□□□□□ -0.53
SREBF1-202ENST00000355815 GFRALQ6UXV0 394 aa11.76□□□□□ -0.53
SREBF1-202ENST00000355815 C18orf12Q96KH6 178 aa11.76□□□□□ -0.53
SREBF1-202ENST00000355815 A0A1B0GWB2 263 aa11.76□□□□□ -0.53
SREBF1-202ENST00000355815 A1L4Q6 167 aa11.76□□□□□ -0.53
SREBF1-202ENST00000355815 RBFOX2O43251 390 aaKnown RBP eCLIP11.76□□□□□ -0.536e-7■■■■■ 28.9
SREBF1-202ENST00000355815 MPDU1O75352 247 aa11.76□□□□□ -0.53
SREBF1-202ENST00000355815 IL18BPO95998 194 aa11.76□□□□□ -0.53
SREBF1-202ENST00000355815 LINC00614P0C842 121 aa11.76□□□□□ -0.53
SREBF1-202ENST00000355815 MPZP25189 248 aa11.76□□□□□ -0.53
SREBF1-202ENST00000355815 RPL39P5Q59GN2 51 aa11.76□□□□□ -0.53
SREBF1-202ENST00000355815 IGFBP2P18065 325 aa11.76□□□□□ -0.53
SREBF1-202ENST00000355815 ZNF418Q8TF45 676 aaPredicted RBP11.76□□□□□ -0.53
SREBF1-202ENST00000355815 GTSF1LQ9H1H1 148 aa11.76□□□□□ -0.53
SREBF1-202ENST00000355815 MALRD1Q5VYJ5 2156 aa11.75□□□□□ -0.53
SREBF1-202ENST00000355815 IGHV3-35A0A0C4DH35 117 aa11.75□□□□□ -0.53
SREBF1-202ENST00000355815 PSPNO60542 156 aa11.75□□□□□ -0.53
SREBF1-202ENST00000355815 CDKN1AP38936 164 aa11.75□□□□□ -0.53
SREBF1-202ENST00000355815 OR13A1Q8NGR1 328 aa11.75□□□□□ -0.53
SREBF1-202ENST00000355815 MS4A5Q9H3V2 200 aa11.75□□□□□ -0.53
SREBF1-202ENST00000355815 CGB1A6NKQ9 187 aa11.75□□□□□ -0.53
SREBF1-202ENST00000355815 C8orf88P0DMB2 117 aa11.75□□□□□ -0.53
SREBF1-202ENST00000355815 TCF24Q7RTU0 167 aa11.75□□□□□ -0.53
SREBF1-202ENST00000355815 C9orf106Q8NAJ2 232 aa11.75□□□□□ -0.53
SREBF1-202ENST00000355815 TXNDC17Q9BRA2 123 aa11.75□□□□□ -0.53
SREBF1-202ENST00000355815 IL6RP08887 468 aaPredicted RBP11.75□□□□□ -0.53
SREBF1-202ENST00000355815 TWIST1Q15672 202 aa11.75□□□□□ -0.53
SREBF1-202ENST00000355815 PET117Q6UWS5 81 aa11.75□□□□□ -0.53
SREBF1-202ENST00000355815 MIR17HGQ75NE6 70 aa11.75□□□□□ -0.53
SREBF1-202ENST00000355815 FAM27E3Q08E93 113 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 OR4D5Q8NGN0 318 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 LINC00470Q9BZP3 86 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 C2CD3Q4AC94 2353 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 SMIM17P0DL12 118 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 FAM90A2PQ658T7 463 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 Q6ZRM9 215 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 NPIPB3Q92617 1050 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 PERPQ96FX8 193 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 PRNDQ9UKY0 176 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 ADAMTS9Q9P2N4 1935 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 hDV102S1A0JD36 115 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 ETV2O00321 342 aaPredicted RBP11.74□□□□□ -0.53
SREBF1-202ENST00000355815 SPSB3Q6PJ21 355 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 ZNF645Q8N7E2 425 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 ZBTB34Q8NCN2 500 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 SLC25A33Q9BSK2 321 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 TNCP24821 2201 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 TRAV9-2A0A087WT02 112 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 C2orf83Q53S99 150 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 PEAR1Q5VY43 1037 aaPredicted RBP11.74□□□□□ -0.53
SREBF1-202ENST00000355815 LYPD6Q86Y78 171 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 Q8NFD4 153 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 OR10AG1Q8NH19 301 aa11.74□□□□□ -0.53
SREBF1-202ENST00000355815 A0A087X0K7 114 aa11.73□□□□□ -0.53
SREBF1-202ENST00000355815 IGKV1-6A0A0C4DH72 117 aa11.73□□□□□ -0.53
SREBF1-202ENST00000355815 HIGD1CA8MV81 97 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms