RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 CRYZL1O95825 349 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 OR8U8P0C7N1 319 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 SEC11BP0C7V7 166 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 HTR1DP28221 377 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 MAS1LP35410 378 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 G6PCP35575 357 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 GNG10P50151 68 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 CAV2P51636 162 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 ELLP55199 621 aaPredicted RBP5.53□□□□□ -1.52
VPS13A-201ENST00000355766 POLR2GP62487 172 aaKnown RBP eCLIP5.53□□□□□ -1.52
VPS13A-201ENST00000355766 PAX8Q06710 450 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 ATP6V1FQ16864 119 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 CXorf66Q5JRM2 361 aaPredicted RBP5.53□□□□□ -1.52
VPS13A-201ENST00000355766 TMEM14EPQ6UXP3 125 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 DPPA3Q6W0C5 159 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 HSD17B13Q7Z5P4 300 aaPredicted RBP5.53□□□□□ -1.52
VPS13A-201ENST00000355766 OR4P4Q8NGL7 312 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 OR4A16Q8NH70 328 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 LHX4Q969G2 390 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 FLYWCH2Q96CP2 140 aaKnown RBP5.53□□□□□ -1.52
VPS13A-201ENST00000355766 GNPNAT1Q96EK6 184 aaPredicted RBP5.53□□□□□ -1.52
VPS13A-201ENST00000355766 SAT2Q96F10 170 aaPredicted RBP5.53□□□□□ -1.52
VPS13A-201ENST00000355766 NABP2Q9BQ15 211 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 SRSF8Q9BRL6 282 aaKnown RBP5.53□□□□□ -1.52
VPS13A-201ENST00000355766 MRPL20Q9BYC9 149 aaKnown RBP5.53□□□□□ -1.52
VPS13A-201ENST00000355766 CYTL1Q9NRR1 136 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 FBXL17Q9UF56 701 aa5.53□□□□□ -1.52
VPS13A-201ENST00000355766 WNK2Q9Y3S1 2297 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 CHST1O43916 411 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 KBTBD11O94819 623 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 S100A1P23297 94 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 HTR2BP41595 481 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 HSPE1P61604 102 aaKnown RBP5.52□□□□□ -1.53
VPS13A-201ENST00000355766 PRCDQ00LT1 54 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 VMA21Q3ZAQ7 101 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 OR4A47Q6IF82 309 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 FAM53AQ6NSI3 398 aaPredicted RBP5.52□□□□□ -1.53
VPS13A-201ENST00000355766 BRD3OSQ6XYD6 125 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 CLRN3Q8NCR9 226 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 OR1S2Q8NGQ3 325 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 TMEM167AQ8TBQ9 72 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 DTD1Q8TEA8 209 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 RPEQ96AT9 228 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 ATP5SQ99766 215 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 GINS3Q9BRX5 216 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 PSMG3Q9BT73 122 aaPredicted RBP5.52□□□□□ -1.53
VPS13A-201ENST00000355766 SIRPDQ9H106 197 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 KCNIP2Q9NS61 270 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 DPM3Q9P2X0 92 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 ONECUT1Q9UBC0 465 aa5.52□□□□□ -1.53
VPS13A-201ENST00000355766 STRAPQ9Y3F4 350 aaKnown RBP5.52□□□□□ -1.53
VPS13A-201ENST00000355766 DYNC2H1Q8NCM8 4307 aaKnown RBP5.52□□□□□ -1.53
VPS13A-201ENST00000355766 IGHV1-3A0A0C4DH29 117 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 A0A1W2PN81 502 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 UPK2O00526 184 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 FGF16O43320 207 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 MPDU1O75352 247 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 TMEM50AO95807 157 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 NMBP08949 121 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 SPP1P10451 314 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 CD1BP29016 333 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 CHRNA7P36544 502 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 UBE2E1P51965 193 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 PAX9P55771 341 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 VWC2Q2TAL6 325 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 OR2B11Q5JQS5 317 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 TPTE2P1Q5T6R2 138 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 PDZD9Q8IXQ8 264 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 EIF4E3Q8N5X7 224 aaKnown RBP5.51□□□□□ -1.53
VPS13A-201ENST00000355766 Q8N7P7 452 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 TEX45Q8NA69 505 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 SSMEM1Q8WWF3 244 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 LEAP2Q969E1 77 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 RAX2Q96IS3 184 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 HARBI1Q96MB7 349 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 PSENENQ9NZ42 101 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 TIMM9Q9Y5J7 89 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 TNCP24821 2201 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 COL7A1Q02388 2944 aa5.51□□□□□ -1.53
VPS13A-201ENST00000355766 A0A1W2PPE3 182 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 A0A1W2PPI3 338 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 MEX3AA1L020 520 aaKnown RBP5.5□□□□□ -1.53
VPS13A-201ENST00000355766 IGSF23A1L1A6 192 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 BTBD17A6NE02 478 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 CEBPZOSA8MTT3 80 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 H7C2Y5 167 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 ATP6V1G1O75348 118 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 RBMXL2O75526 392 aaKnown RBP5.5□□□□□ -1.53
VPS13A-201ENST00000355766 CFDP00746 253 aaPredicted RBP5.5□□□□□ -1.53
VPS13A-201ENST00000355766 IFNA5P01569 189 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 IFNA17P01571 189 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 IGKV1-16P04430 117 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 SAA1P0DJI8 122 aaPredicted RBP5.5□□□□□ -1.53
VPS13A-201ENST00000355766 VDAC2P45880 294 aaPredicted RBP5.5□□□□□ -1.53
VPS13A-201ENST00000355766 SULT1A2P50226 295 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 BPIFB3P59826 476 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 KRTAP10-11P60412 298 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 RAB11AP62491 216 aa5.5□□□□□ -1.53
VPS13A-201ENST00000355766 RPL8P62917 257 aaKnown RBP5.5□□□□□ -1.53
VPS13A-201ENST00000355766 SERF2P84101 59 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms