RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 PTPRBP23467 1997 aa11.29□□□□□ -0.6
EBF3-201ENST00000355311 TRAV5A0A0B4J249 113 aa11.29□□□□□ -0.6
EBF3-201ENST00000355311 IGHV1-46P01743 117 aa11.29□□□□□ -0.6
EBF3-201ENST00000355311 CRISP2P16562 243 aa11.29□□□□□ -0.6
EBF3-201ENST00000355311 C1orf159Q96HA4 380 aa11.29□□□□□ -0.6
EBF3-201ENST00000355311 LINC00479Q96M42 142 aa11.29□□□□□ -0.6
EBF3-201ENST00000355311 UHRF2Q96PU4 802 aa11.29□□□□□ -0.6
EBF3-201ENST00000355311 CRYBG3Q68DQ2 2970 aa11.29□□□□□ -0.6
EBF3-201ENST00000355311 IER3P46695 156 aa11.29□□□□□ -0.6
EBF3-201ENST00000355311 SSBP2P81877 361 aaPredicted RBP11.29□□□□□ -0.6
EBF3-201ENST00000355311 LCN12Q6JVE5 192 aa11.29□□□□□ -0.6
EBF3-201ENST00000355311 OR2T6Q8NHC8 308 aa11.29□□□□□ -0.6
EBF3-201ENST00000355311 ANAPC16Q96DE5 110 aa11.29□□□□□ -0.6
EBF3-201ENST00000355311 ELOVL5Q9NYP7 299 aa11.29□□□□□ -0.6
EBF3-201ENST00000355311 LY6HO94772 140 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 TOX4O94842 621 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 IGLV1-44P01699 117 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 KRTCAP3Q53RY4 240 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 LYPD2Q6UXB3 125 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 OR9G1Q8NH87 305 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 ZC2HC1AQ96GY0 325 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 DIRC3C9JPN6 131 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 ENSAO43768 121 aaKnown RBP11.28□□□□□ -0.6
EBF3-201ENST00000355311 CA1P00915 261 aaPredicted RBP11.28□□□□□ -0.6
EBF3-201ENST00000355311 TPPP2P59282 170 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 LEMD1Q68G75 181 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 KIR3DL3Q8N743 410 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 STPG3Q8N7X2 389 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 OCC1Q8TAD7 63 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 RCHY1Q96PM5 261 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 GGTLC1Q9BX51 225 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 OR7C2O60412 319 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 TYMSP04818 313 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 ADH4P08319 380 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 DOLPP1Q86YN1 238 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 ABHD17AQ96GS6 310 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 ENY2Q9NPA8 101 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 RPH3ALQ9UNE2 315 aa11.28□□□□□ -0.6
EBF3-201ENST00000355311 HRNRQ86YZ3 2850 aaPredicted RBP11.27□□□□□ -0.6
EBF3-201ENST00000355311 LOC105371242A0A075B767 164 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 C17orf112F2Z3M2 114 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 TMEM250H0YL14 139 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 J3QR06 171 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 SRP14P37108 136 aaKnown RBP11.27□□□□□ -0.61
EBF3-201ENST00000355311 ZNF90Q03938 601 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 MORN5Q5VZ52 161 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 PIP4P1Q86T03 277 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 RBMXL3Q8N7X1 1067 aaKnown RBP11.27□□□□□ -0.61
EBF3-201ENST00000355311 RITA1Q96K30 269 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 MRPL18Q9H0U6 180 aaKnown RBP11.27□□□□□ -0.61
EBF3-201ENST00000355311 RAI1Q7Z5J4 1906 aaPredicted RBP11.27□□□□□ -0.61
EBF3-201ENST00000355311 TRGV10A0A0A0MS01 117 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 FAM90A26D6RGX4 464 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 FCN1O00602 326 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 NPY1RP25929 384 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 PSG5Q15238 335 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 SAPCD1Q5SSQ6 148 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 WDR83OSQ9Y284 106 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 LAMTOR2Q9Y2Q5 125 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 OR51B2Q9Y5P1 312 aa11.27□□□□□ -0.61
EBF3-201ENST00000355311 IGKV1OR2-108A0A075B7D4 117 aa11.26□□□□□ -0.61
EBF3-201ENST00000355311 RPL31P62899 125 aaKnown RBP11.26□□□□□ -0.61
EBF3-201ENST00000355311 MBNL2Q5VZF2 373 aaKnown RBP11.26□□□□□ -0.61
EBF3-201ENST00000355311 TMEM144Q7Z5S9 345 aa11.26□□□□□ -0.61
EBF3-201ENST00000355311 ZBTB34Q8NCN2 500 aa11.26□□□□□ -0.61
EBF3-201ENST00000355311 SFRP2Q96HF1 295 aa11.26□□□□□ -0.61
EBF3-201ENST00000355311 ALKBH7Q9BT30 221 aaPredicted RBP11.26□□□□□ -0.61
EBF3-201ENST00000355311 RNF7Q9UBF6 113 aa11.26□□□□□ -0.61
EBF3-201ENST00000355311 TBL2Q9Y4P3 447 aaKnown RBP11.26□□□□□ -0.61
EBF3-201ENST00000355311 A0A1W2PRD5 423 aa11.26□□□□□ -0.61
EBF3-201ENST00000355311 A0A1W2PRF3 423 aa11.26□□□□□ -0.61
EBF3-201ENST00000355311 A0A1W2PRM7 423 aa11.26□□□□□ -0.61
EBF3-201ENST00000355311 HYPMO75409 117 aa11.26□□□□□ -0.61
EBF3-201ENST00000355311 NTF3P20783 257 aa11.26□□□□□ -0.61
EBF3-201ENST00000355311 CRYBB3P26998 211 aa11.26□□□□□ -0.61
EBF3-201ENST00000355311 TIMP3P35625 211 aa11.26□□□□□ -0.61
EBF3-201ENST00000355311 SLC24A4Q8NFF2 622 aa11.26□□□□□ -0.61
EBF3-201ENST00000355311 ASCL2Q99929 193 aa11.26□□□□□ -0.61
EBF3-201ENST00000355311 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.26□□□□□ -0.61
EBF3-201ENST00000355311 CRYABP02511 175 aaKnown RBP11.25□□□□□ -0.61
EBF3-201ENST00000355311 CD40P25942 277 aa11.25□□□□□ -0.61
EBF3-201ENST00000355311 VDAC2P45880 294 aaPredicted RBP11.25□□□□□ -0.61
EBF3-201ENST00000355311 AMTP48728 403 aa11.25□□□□□ -0.61
EBF3-201ENST00000355311 HNRNPA3P51991 378 aaKnown RBP11.25□□□□□ -0.61
EBF3-201ENST00000355311 EFNB3Q15768 340 aa11.25□□□□□ -0.61
EBF3-201ENST00000355311 RUSC1-AS1Q66K80 236 aa11.25□□□□□ -0.61
EBF3-201ENST00000355311 HCP5Q6MZN7 132 aa11.25□□□□□ -0.61
EBF3-201ENST00000355311 ST6GALNAC6Q969X2 333 aa11.25□□□□□ -0.61
EBF3-201ENST00000355311 RNASE7Q9H1E1 156 aaKnown RBP11.25□□□□□ -0.61
EBF3-201ENST00000355311 GSX1Q9H4S2 264 aaPredicted RBP11.25□□□□□ -0.61
EBF3-201ENST00000355311 DSCAML1Q8TD84 2053 aa11.25□□□□□ -0.61
EBF3-201ENST00000355311 KBTBD11-OT1A0A1B0GTJ5 212 aa11.25□□□□□ -0.61
EBF3-201ENST00000355311 SNURFLB1AK76 121 aa11.25□□□□□ -0.61
EBF3-201ENST00000355311 MGST1P10620 155 aaKnown RBP11.25□□□□□ -0.61
EBF3-201ENST00000355311 BPIFB3P59826 476 aa11.25□□□□□ -0.61
EBF3-201ENST00000355311 SUMO1P63165 101 aaKnown RBP11.25□□□□□ -0.61
EBF3-201ENST00000355311 BSPH1Q075Z2 132 aa11.25□□□□□ -0.61
EBF3-201ENST00000355311 SIGLECL1Q8N7X8 197 aa11.25□□□□□ -0.61
EBF3-201ENST00000355311 PPP1R35Q8TAP8 253 aa11.25□□□□□ -0.61
EBF3-201ENST00000355311 PRR7Q8TB68 274 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms